Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3350

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
233,909	+		GFF3348	0.84	-0.8
233,909	+		GFF3348	0.84	+0.4
233,910	-		GFF3348	0.84	-0.2
235,640	-		GFF3351	0.38	+0.0
235,858	+		GFF3351	0.58	+0.5
235,859	-		GFF3351	0.58	-0.8
235,859	-		GFF3351	0.58	-0.6
235,909	+		GFF3351	0.63	-1.3
235,909	+		GFF3351	0.63	+0.8
235,909	+		GFF3351	0.63	+0.1
235,909	+		GFF3351	0.63	-0.1
235,910	-		GFF3351	0.63	-2.4
235,910	-		GFF3351	0.63	+0.1