Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF293
Experiment: Ying_all64 rep A; time point 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_all64 rep A; time point 1 |
---|---|---|---|---|---|
remove | |||||
305,893 | + | GFF291 | 0.36 | -1.3 | |
305,893 | + | GFF291 | 0.36 | -0.2 | |
305,893 | + | GFF291 | 0.36 | -3.0 | |
305,893 | + | GFF291 | 0.36 | +1.2 | |
306,720 | - | GFF292 | 0.82 | +1.0 | |
308,073 | + | -0.2 | |||
308,073 | + | -1.4 | |||
308,073 | + | -0.6 | |||
308,074 | - | +0.6 |
Or see this region's nucleotide sequence