Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2878

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
465,229	+		GFF2877	0.15	+1.0
465,661	+		GFF2877	0.68	+1.3
465,662	-		GFF2877	0.68	+0.7
465,986	-				+0.1
465,986	-				-1.1
465,986	-				+0.1
466,037	+				-0.1
466,085	+				+0.3
466,085	+				-0.3
466,668	-		GFF2878	0.63	+0.0
466,668	-		GFF2878	0.63	+0.4
466,668	-		GFF2878	0.63	+1.5
466,844	+		GFF2878	0.83	-0.1
466,892	+		GFF2878	0.88	+2.2
466,892	+		GFF2878	0.88	+0.1
467,718	+		GFF2879	0.21	+0.0
467,719	-		GFF2879	0.21	-0.8
467,719	-		GFF2879	0.21	+0.4