Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2504

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
90,880	+				+0.6
90,880	+				-0.1
90,881	-				-2.5
90,881	-				+0.3
90,883	+				+2.0
90,883	+				-0.2
90,883	+				-0.4
90,883	+				+0.6
90,883	+				-0.1
90,883	+				-0.5
90,883	+				+0.3
90,883	+				-0.8
90,884	-				-0.3
90,931	+				-0.0
90,931	+				-0.2
90,931	+				+0.0
90,931	+				-1.5
90,931	+				-0.8
90,931	+				+0.3
90,931	+				-0.4
90,931	+				+0.8
90,932	-				-0.5
90,932	-				+1.5
90,932	-				-0.4
90,932	-				+0.7
90,932	-				-0.3
90,932	-				+0.0
90,932	-				-0.2
90,996	+				+1.6
90,996	+				+0.3
90,997	-				-1.0
92,177	+				-0.3
92,177	+				+0.7
92,177	+				+0.1
93,136	+				-0.1
93,136	+				+0.9
93,136	+				-0.5
93,136	+				+0.5
93,137	-				+0.2
93,137	-				+0.1
93,137	-				-0.5
93,137	-				+0.2
93,137	-				-0.4