Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2453

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
33,201	+				+0.8
33,201	+				-0.3
33,201	+				-1.3
33,201	+				+0.1
33,201	+				-2.6
33,202	-				+0.2
33,202	-				-0.9
33,202	-				-0.1
33,202	-				-1.0
33,224	-				+1.2
33,303	+				-2.3
33,304	-				-1.1
34,510	-		GFF2453	0.23	-0.2
34,608	+		GFF2453	0.30	-1.7
34,608	+		GFF2453	0.30	-0.3
34,609	-		GFF2453	0.30	+0.3
34,609	-		GFF2453	0.30	-0.5
35,192	-		GFF2453	0.67	+0.2
35,846	+				-0.3
35,846	+				+0.6
35,847	-				+0.6
35,891	+				+0.5
35,891	+				-0.7
35,891	+				+0.3
35,891	+				+0.4
35,891	+				+0.1
35,891	+				+0.7
35,892	-				+0.2
35,892	-				+0.5
35,939	+				-0.0
35,960	+				+0.9
35,960	+				-1.2
35,961	-				+0.4
35,961	-				+0.5