Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2139

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
1,028,725	-		GFF2138	0.17	+0.8
1,028,802	+		GFF2138	0.26	-0.8
1,028,883	+		GFF2138	0.34	+0.7
1,028,932	-		GFF2138	0.39	-0.4
1,029,081	+		GFF2138	0.55	+0.5
1,029,156	+		GFF2138	0.63	-0.5
1,029,156	+		GFF2138	0.63	+0.1
1,029,156	+		GFF2138	0.63	+0.9
1,029,157	-		GFF2138	0.64	-0.1
1,029,243	+		GFF2138	0.73	-1.0
1,029,390	+		GFF2138	0.89	-0.2
1,029,547	+				+0.3
1,029,552	-				+0.7
1,029,568	-				+0.1
1,029,572	-				-0.1
1,030,367	-		GFF2139	0.85	+1.2
1,030,402	+		GFF2139	0.89	+0.6
1,030,866	-		GFF2141	0.13	-0.4
1,031,330	+		GFF2141	0.63	-0.1
1,031,330	+		GFF2141	0.63	+0.3