Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1530

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
384,001	-		GFF1528	0.41	-0.1
384,039	+		GFF1528	0.67	+0.3
384,524	+		GFF1529	0.51	+0.6
384,525	-		GFF1529	0.51	-1.0
384,558	-		GFF1529	0.55	+0.6
384,558	-		GFF1529	0.55	+0.2
384,887	+				-0.4
384,888	-				-0.1
384,888	-				+0.0
384,888	-				-0.1
384,888	-				+0.3
384,888	-				-0.7
384,888	-				-2.8
386,446	+		GFF1531	0.49	+0.8
386,446	+		GFF1531	0.49	-0.4
386,737	+		GFF1531	0.78	+0.7