Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1282

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
139,326	+				-0.1
139,326	+				-0.8
139,326	+				+0.2
139,326	+				-0.3
139,326	+				-0.2
139,326	+				+0.2
139,326	+				+0.7
139,326	+				-1.4
139,327	-				-0.8
139,327	-				+0.6
139,327	-				+0.2
139,327	-				-0.4
139,327	-				+0.1
139,327	-				-2.6
139,327	-				+0.3
139,327	-				+0.3
139,327	-				-0.3
139,327	-				+0.2
139,327	-				+0.5
139,628	+		GFF1281	0.31	+0.1
139,628	+		GFF1281	0.31	-0.1
139,629	-		GFF1281	0.31	-0.4
139,683	-		GFF1281	0.37	-0.2
139,952	+		GFF1281	0.68	+1.1
139,952	+		GFF1281	0.68	-0.1
139,953	-		GFF1281	0.69	-0.3
140,135	+		GFF1281	0.90	-0.7
140,135	+		GFF1281	0.90	+0.5
140,135	+		GFF1281	0.90	+0.6
140,135	+		GFF1281	0.90	+1.0
140,135	+		GFF1281	0.90	-0.2
140,135	+		GFF1281	0.90	-1.5
140,135	+		GFF1281	0.90	-0.4
140,135	+		GFF1281	0.90	-0.6
140,135	+		GFF1281	0.90	+0.4
140,135	+		GFF1281	0.90	+0.3
140,135	+		GFF1281	0.90	-0.2
140,135	+		GFF1281	0.90	+0.0
140,135	+		GFF1281	0.90	+1.3
140,135	+		GFF1281	0.90	-1.6
140,135	+		GFF1281	0.90	+0.1
140,135	+		GFF1281	0.90	+0.0
140,136	-		GFF1281	0.90	-1.7
140,136	-		GFF1281	0.90	-1.4
140,136	-		GFF1281	0.90	+0.3
140,136	-		GFF1281	0.90	-0.3
140,136	-		GFF1281	0.90	-0.5
140,136	-		GFF1281	0.90	-0.0
140,136	-		GFF1281	0.90	+0.6
140,136	-		GFF1281	0.90	-0.6
140,136	-		GFF1281	0.90	-1.4
140,136	-		GFF1281	0.90	-0.1
140,136	-		GFF1281	0.90	+0.6
140,136	-		GFF1281	0.90	+0.4
140,136	-		GFF1281	0.90	-0.8
140,832	-				+0.4
140,888	+				-1.9
140,888	+				+0.1
140,888	+				-0.3
140,888	+				+1.2
140,888	+				+0.5
140,889	-				+0.8
140,889	-				-1.1
140,895	-				+0.0
140,921	+				-0.7
140,921	+				-0.3
140,921	+				-0.1
140,921	+				+0.1
140,921	+				+0.4
140,921	+				-0.1
140,922	-				-1.4
140,922	-				-0.1
140,922	-				-0.0
140,993	+		GFF1283	0.15	-0.9
140,994	-		GFF1283	0.15	-0.7
140,994	-		GFF1283	0.15	-1.8
141,043	+		GFF1283	0.22	+0.9
141,179	+		GFF1283	0.40	+0.7
141,287	+		GFF1283	0.54	+0.8
141,287	+		GFF1283	0.54	+0.4
141,288	-		GFF1283	0.54	+0.5
141,288	-		GFF1283	0.54	-0.5
141,288	-		GFF1283	0.54	-1.1
141,288	-		GFF1283	0.54	+0.2
141,290	+		GFF1283	0.54	-0.1
141,290	+		GFF1283	0.54	+0.3
141,290	+		GFF1283	0.54	-0.7
141,290	+		GFF1283	0.54	-0.3
141,290	+		GFF1283	0.54	+0.2
141,290	+		GFF1283	0.54	+0.3
141,290	+		GFF1283	0.54	+1.4
141,290	+		GFF1283	0.54	+0.3
141,290	+		GFF1283	0.54	+0.1
141,291	-		GFF1283	0.54	+0.1
141,712	+		GFF1284	0.34	-0.9
141,713	-		GFF1284	0.34	+0.0
141,713	-		GFF1284	0.34	+0.1