Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1096

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
14,018	-				-1.4
14,018	-				+1.0
14,123	-				+1.3
14,194	+				+1.0
14,345	+				+0.2
14,345	+				-0.4
14,346	-				-0.2
14,397	+				-0.9
14,398	-				-0.0
14,398	-				+1.4
14,736	+				-0.8
14,736	+				-0.1
14,818	+				-0.8
14,818	+				-1.2
14,895	+				+1.0
14,895	+				-0.1
14,896	-				-1.4
14,896	-				+0.4
14,896	-				-0.7
15,014	+		GFF1096	0.39	+0.4
15,350	+				-0.9
15,350	+				+0.1
15,434	-				+0.3
15,602	+				+0.9
15,603	-				+0.3
15,741	-				+0.8
15,755	-				+1.1
15,815	+				+0.4
15,815	+				-0.4
15,889	+				-0.3
15,901	+				-1.4
15,902	-				+0.4
15,902	-				-0.1
15,992	+				-1.0
15,992	+				-0.0
15,992	+				-1.1
16,111	+				-0.7
16,112	-				+0.5