Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1057

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
796,758	+				+0.1
796,759	-				+0.2
796,759	-				+0.1
796,799	-				+0.1
796,799	-				+0.8
796,818	-				-1.2
796,864	+				-1.0
796,941	+				-0.1
796,942	-				+0.3
796,942	-				-1.7
797,327	+				+0.2
797,358	-				+0.9
797,358	-				+0.6
797,449	+				-1.7
797,450	-				-0.2
797,617	+				-0.7
797,618	-				-0.0
797,618	-				-0.5
797,643	+				+0.1
797,644	-				+0.5
797,697	+				-0.2
797,698	-				-1.4
797,698	-				+0.3
797,748	+				+1.0
797,748	+				+0.3
797,749	-				+0.9
797,944	+		GFF1057	0.50	+1.6
797,944	+		GFF1057	0.50	-0.1
797,945	-		GFF1057	0.50	+1.1
798,360	-				+0.4
798,668	+		GFF1058	0.30	-0.2
798,668	+		GFF1058	0.30	+0.6
798,669	-		GFF1058	0.30	+0.5
798,669	-		GFF1058	0.30	-0.4
799,094	+		GFF1058	0.60	+0.3
799,094	+		GFF1058	0.60	-1.0
799,094	+		GFF1058	0.60	-1.0