Strain Fitness in Escherichia fergusonii Becca around EFB2_03731

Experiment: BHIS no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control
3,906,345	-		EFB2_03730	0.66	-2.2
3,906,345	-		EFB2_03730	0.66	+0.2
3,906,355	+		EFB2_03730	0.66	-0.2
3,906,356	-		EFB2_03730	0.66	-0.3
3,906,356	-		EFB2_03730	0.66	-0.1
3,906,378	+		EFB2_03730	0.67	-0.8
3,906,378	+		EFB2_03730	0.67	+0.2
3,906,378	+		EFB2_03730	0.67	-0.3
3,906,378	+		EFB2_03730	0.67	-0.3
3,906,378	+		EFB2_03730	0.67	-0.1
3,906,378	+		EFB2_03730	0.67	-0.2
3,906,378	+		EFB2_03730	0.67	+0.3
3,906,379	-		EFB2_03730	0.67	+1.2
3,906,379	-		EFB2_03730	0.67	-2.7
3,906,379	-		EFB2_03730	0.67	+2.0
3,906,379	-		EFB2_03730	0.67	+0.4
3,906,379	-		EFB2_03730	0.67	+0.8
3,906,379	-		EFB2_03730	0.67	+0.4
3,906,379	-		EFB2_03730	0.67	+0.6
3,906,379	-		EFB2_03730	0.67	-1.8
3,906,400	+		EFB2_03730	0.68	+1.0
3,906,400	+		EFB2_03730	0.68	+0.3
3,906,400	+		EFB2_03730	0.68	-1.7
3,906,400	+		EFB2_03730	0.68	+0.9
3,906,400	+		EFB2_03730	0.68	-1.6
3,906,400	+		EFB2_03730	0.68	-0.5
3,906,400	+		EFB2_03730	0.68	+1.4
3,906,401	-		EFB2_03730	0.68	-0.2
3,906,401	-		EFB2_03730	0.68	+1.6
3,906,401	-		EFB2_03730	0.68	+0.4
3,906,401	-		EFB2_03730	0.68	+1.3
3,906,401	-		EFB2_03730	0.68	+1.0
3,906,401	-		EFB2_03730	0.68	+0.9
3,906,401	-		EFB2_03730	0.68	+0.4
3,906,401	-		EFB2_03730	0.68	-2.6
3,906,401	-		EFB2_03730	0.68	+1.3
3,906,401	-		EFB2_03730	0.68	+0.5
3,906,401	-		EFB2_03730	0.68	-2.3
3,906,401	-		EFB2_03730	0.68	-0.4
3,906,413	+		EFB2_03730	0.69	-0.7
3,906,413	+		EFB2_03730	0.69	-0.5
3,906,413	+		EFB2_03730	0.69	+0.1
3,906,413	+		EFB2_03730	0.69	-0.8
3,906,413	+		EFB2_03730	0.69	-0.3
3,906,413	+		EFB2_03730	0.69	-0.7
3,906,413	+		EFB2_03730	0.69	+0.3
3,906,413	+		EFB2_03730	0.69	-2.4
3,906,413	+		EFB2_03730	0.69	+2.1
3,906,414	-		EFB2_03730	0.69	-1.4
3,906,414	-		EFB2_03730	0.69	-1.0
3,906,414	-		EFB2_03730	0.69	+0.7
3,906,414	-		EFB2_03730	0.69	-0.2
3,906,414	-		EFB2_03730	0.69	-1.3
3,906,422	+		EFB2_03730	0.69	+0.5
3,906,422	+		EFB2_03730	0.69	-1.5
3,906,422	+		EFB2_03730	0.69	+1.1
3,906,422	+		EFB2_03730	0.69	+1.8
3,906,422	+		EFB2_03730	0.69	-0.1
3,906,422	+		EFB2_03730	0.69	+0.4
3,906,422	+		EFB2_03730	0.69	+0.4
3,906,422	+		EFB2_03730	0.69	+0.6
3,906,423	-		EFB2_03730	0.69	+0.5
3,906,423	-		EFB2_03730	0.69	-1.3
3,906,423	-		EFB2_03730	0.69	+0.8
3,906,423	-		EFB2_03730	0.69	+1.1
3,906,423	-		EFB2_03730	0.69	-0.6
3,906,439	-		EFB2_03730	0.70	-2.2
3,906,462	+		EFB2_03730	0.71	-2.1
3,906,462	+		EFB2_03730	0.71	+0.0
3,906,462	+		EFB2_03730	0.71	-1.6
3,906,463	-		EFB2_03730	0.71	+0.6
3,906,463	-		EFB2_03730	0.71	+0.6
3,906,463	-		EFB2_03730	0.71	+0.4
3,906,463	-		EFB2_03730	0.71	-1.5
3,906,463	-		EFB2_03730	0.71	+1.3
3,906,463	-		EFB2_03730	0.71	-1.0
3,906,463	-		EFB2_03730	0.71	+0.5
3,906,541	+		EFB2_03730	0.75	+0.0
3,906,541	+		EFB2_03730	0.75	-2.3
3,906,541	+		EFB2_03730	0.75	-1.2
3,906,556	+		EFB2_03730	0.75	-0.8
3,906,556	+		EFB2_03730	0.75	-1.0
3,906,557	-		EFB2_03730	0.75	+2.0
3,906,571	+		EFB2_03730	0.76	+0.5
3,906,571	+		EFB2_03730	0.76	+0.2
3,906,571	+		EFB2_03730	0.76	+0.5
3,906,571	+		EFB2_03730	0.76	-1.3
3,906,571	+		EFB2_03730	0.76	+0.4
3,906,571	+		EFB2_03730	0.76	+0.9
3,906,572	-		EFB2_03730	0.76	+0.2
3,906,572	-		EFB2_03730	0.76	-1.0
3,906,572	-		EFB2_03730	0.76	-4.1
3,906,573	+		EFB2_03730	0.76	+0.9
3,906,573	+		EFB2_03730	0.76	-2.7
3,906,573	+		EFB2_03730	0.76	-1.8
3,906,573	+		EFB2_03730	0.76	-0.6
3,906,573	+		EFB2_03730	0.76	+0.1
3,906,573	+		EFB2_03730	0.76	+0.4
3,906,573	+		EFB2_03730	0.76	-3.3
3,906,573	+		EFB2_03730	0.76	-2.7
3,906,573	+		EFB2_03730	0.76	+1.3
3,906,573	+		EFB2_03730	0.76	-2.4
3,906,573	+		EFB2_03730	0.76	-4.3
3,906,573	+		EFB2_03730	0.76	+0.1
3,906,573	+		EFB2_03730	0.76	-2.1
3,906,574	-		EFB2_03730	0.76	-0.4
3,906,574	-		EFB2_03730	0.76	-0.1
3,906,574	-		EFB2_03730	0.76	+0.9
3,906,574	-		EFB2_03730	0.76	+4.6
3,906,574	-		EFB2_03730	0.76	-3.2
3,906,574	-		EFB2_03730	0.76	+0.8
3,906,574	-		EFB2_03730	0.76	+0.8
3,906,574	-		EFB2_03730	0.76	+2.4
3,906,574	-		EFB2_03730	0.76	-2.2
3,906,574	-		EFB2_03730	0.76	+1.4
3,906,582	+		EFB2_03730	0.76	-1.6
3,906,582	+		EFB2_03730	0.76	-1.2
3,906,582	+		EFB2_03730	0.76	+1.4
3,906,582	+		EFB2_03730	0.76	+0.8
3,906,583	-		EFB2_03730	0.76	-1.5
3,906,583	-		EFB2_03730	0.76	-0.2
3,906,583	-		EFB2_03730	0.76	-0.6
3,906,583	-		EFB2_03730	0.76	-3.3
3,906,583	-		EFB2_03730	0.76	-0.6
3,906,583	-		EFB2_03730	0.76	+0.7
3,906,583	-		EFB2_03730	0.76	+1.0
3,906,594	+		EFB2_03730	0.77	+3.5
3,906,594	+		EFB2_03730	0.77	-0.2
3,906,594	+		EFB2_03730	0.77	+0.8
3,906,595	-		EFB2_03730	0.77	-0.2
3,906,616	+		EFB2_03730	0.78	-0.3
3,906,616	+		EFB2_03730	0.78	-2.9
3,906,616	+		EFB2_03730	0.78	+0.4
3,906,675	+		EFB2_03730	0.80	+0.3
3,906,675	+		EFB2_03730	0.80	-1.8
3,906,676	-		EFB2_03730	0.80	+2.5
3,906,703	-		EFB2_03730	0.82	-0.1
3,906,712	+		EFB2_03730	0.82	-3.3
3,906,713	-		EFB2_03730	0.82	+1.1
3,906,742	-		EFB2_03730	0.83	+2.8
3,906,752	-		EFB2_03730	0.84	+1.2
3,906,826	+		EFB2_03730	0.87	+0.5
3,906,826	+		EFB2_03730	0.87	+0.3
3,906,826	+		EFB2_03730	0.87	-2.3
3,906,826	+		EFB2_03730	0.87	-3.5
3,906,826	+		EFB2_03730	0.87	+1.2
3,906,826	+		EFB2_03730	0.87	-1.8
3,906,826	+		EFB2_03730	0.87	-2.3
3,906,826	+		EFB2_03730	0.87	+0.9
3,906,826	+		EFB2_03730	0.87	-1.0
3,906,826	+		EFB2_03730	0.87	-2.0
3,906,826	+		EFB2_03730	0.87	+0.2
3,906,826	+		EFB2_03730	0.87	-1.2
3,906,826	+		EFB2_03730	0.87	-0.1
3,906,826	+		EFB2_03730	0.87	-2.4
3,906,826	+		EFB2_03730	0.87	-1.1
3,906,826	+		EFB2_03730	0.87	-3.3
3,906,826	+		EFB2_03730	0.87	+1.1
3,906,826	+		EFB2_03730	0.87	+1.0
3,906,827	-		EFB2_03730	0.87	+3.2
3,906,827	-		EFB2_03730	0.87	+0.2
3,906,827	-		EFB2_03730	0.87	-2.5
3,906,827	-		EFB2_03730	0.87	+0.7
3,906,827	-		EFB2_03730	0.87	-0.4
3,906,827	-		EFB2_03730	0.87	+0.1
3,906,827	-		EFB2_03730	0.87	-1.5
3,906,827	-		EFB2_03730	0.87	-3.1
3,906,827	-		EFB2_03730	0.87	+1.5
3,906,827	-		EFB2_03730	0.87	-1.7
3,906,827	-		EFB2_03730	0.87	+0.9
3,906,827	-		EFB2_03730	0.87	-1.4
3,906,827	-		EFB2_03730	0.87	-0.5
3,906,827	-		EFB2_03730	0.87	+0.1
3,906,827	-		EFB2_03730	0.87	+1.4
3,906,828	+		EFB2_03730	0.87	-2.3
3,906,828	+		EFB2_03730	0.87	+0.9
3,906,828	+		EFB2_03730	0.87	-3.5
3,906,828	+		EFB2_03730	0.87	+1.2
3,906,828	+		EFB2_03730	0.87	+0.7
3,906,828	+		EFB2_03730	0.87	+2.4
3,906,828	+		EFB2_03730	0.87	+0.3
3,906,828	+		EFB2_03730	0.87	-0.9
3,906,828	+		EFB2_03730	0.87	+0.9
3,906,828	+		EFB2_03730	0.87	+0.2
3,906,828	+		EFB2_03730	0.87	-0.9
3,906,828	+		EFB2_03730	0.87	+0.1
3,906,828	+		EFB2_03730	0.87	+0.0
3,906,828	+		EFB2_03730	0.87	+0.3
3,906,828	+		EFB2_03730	0.87	-0.2
3,906,828	+		EFB2_03730	0.87	+0.3
3,906,829	-		EFB2_03730	0.87	-1.1
3,906,829	-		EFB2_03730	0.87	+0.8
3,906,829	-		EFB2_03730	0.87	-1.6
3,906,829	-		EFB2_03730	0.87	-0.3
3,906,829	-		EFB2_03730	0.87	-0.0
3,906,829	-		EFB2_03730	0.87	-2.3
3,906,829	-		EFB2_03730	0.87	+0.7
3,906,829	-		EFB2_03730	0.87	-0.2
3,906,829	-		EFB2_03730	0.87	-0.9
3,906,829	-		EFB2_03730	0.87	+0.4
3,906,829	-		EFB2_03730	0.87	+0.6
3,906,829	-		EFB2_03730	0.87	-0.8
3,906,829	-		EFB2_03730	0.87	-1.4
3,906,829	-		EFB2_03730	0.87	+0.6
3,906,829	-		EFB2_03730	0.87	+0.3
3,906,829	-		EFB2_03730	0.87	+0.2
3,906,829	-		EFB2_03730	0.87	+1.2
3,906,829	-		EFB2_03730	0.87	+1.0
3,906,829	-		EFB2_03730	0.87	-1.2
3,906,865	+		EFB2_03730	0.89	+0.1
3,906,901	+				+0.0
3,906,901	+				+0.5
3,906,901	+				+0.3
3,907,013	+				+1.4
3,907,013	+				-0.7
3,907,013	+				-0.4
3,907,013	+				-1.0
3,907,013	+				+0.2
3,907,014	-				-1.1
3,907,014	-				-0.0
3,907,014	-				-1.5
3,907,014	-				-1.6
3,907,014	-				+0.2
3,907,023	+				+0.2
3,907,024	-				-0.6
3,907,045	+				-1.0
3,907,045	+				-1.0
3,907,045	+				+0.2
3,907,045	+				-2.3
3,907,045	+				+2.1
3,907,045	+				+0.3
3,907,045	+				-1.2
3,907,045	+				-2.0
3,907,046	-				+1.9
3,907,046	-				+0.2
3,907,046	-				-3.7
3,907,046	-				-0.1
3,907,046	-				+0.6
3,907,046	-				+1.1
3,907,046	-				+0.5
3,907,060	+				-0.0
3,907,060	+				+0.8
3,907,060	+				-0.6
3,907,060	+				-0.6
3,907,061	-				-0.6
3,907,091	+				+1.6
3,907,100	+				+0.2
3,907,100	+				-0.7
3,907,100	+				-0.1
3,907,100	+				-0.6
3,907,100	+				+0.1
3,907,100	+				+0.7
3,907,100	+				-1.0
3,907,100	+				+0.4
3,907,100	+				-3.2
3,907,100	+				-2.7
3,907,100	+				-0.0
3,907,100	+				-2.5
3,907,101	-				+0.2
3,907,101	-				+0.5
3,907,101	-				+0.0
3,907,101	-				+0.3
3,907,101	-				+1.0
3,907,101	-				+1.5
3,907,101	-				+1.6
3,907,101	-				-1.4
3,907,101	-				-0.2
3,907,101	-				-0.9
3,907,101	-				+0.2
3,907,101	-				+0.4
3,907,101	-				-0.6
3,907,101	-				-1.0
3,907,101	-				-1.3
3,907,101	-				-1.1
3,907,101	-				-1.2
3,907,101	-				+2.6
3,907,108	-				+0.5
3,907,123	+				+0.7
3,907,124	-				+2.0
3,907,129	+				-1.9
3,907,130	-				-2.6
3,907,130	-				-0.8
3,907,157	+				-1.8
3,907,157	+				-2.5
3,907,157	+				+1.3
3,907,157	+				-2.4
3,907,157	+				+2.7
3,907,158	-				-2.6
3,907,158	-				-2.1
3,907,158	-				+0.2
3,907,158	-				+0.3
3,907,159	+				+0.1
3,907,159	+				+0.3
3,907,160	-				+1.7
3,907,160	-				-3.4
3,907,160	-				+0.5
3,907,178	+				-2.4
3,907,178	+				-0.2
3,907,178	+				-0.5
3,907,178	+				+0.1
3,907,178	+				+2.3
3,907,178	+				+0.4
3,907,179	-				-2.4
3,907,179	-				+1.2
3,907,179	-				+0.3
3,907,179	-				-1.2
3,907,179	-				+2.7
3,907,179	-				+0.0
3,907,179	-				+0.2
3,907,179	-				+1.1
3,907,179	-				-0.7
3,907,179	-				-0.8
3,907,194	+				-3.1
3,907,196	+				-3.5
3,907,196	+				-2.2
3,907,196	+				-1.0
3,907,196	+				-0.0
3,907,197	-				+1.2
3,907,197	-				-0.4
3,907,197	-				-1.0
3,907,201	-				-0.1
3,907,233	+				+1.9
3,907,234	-				-1.0
3,907,234	-				+0.1
3,907,234	-				+0.6
3,907,265	+				-1.8
3,907,269	-				+0.2
3,907,276	+				+0.0
3,907,304	-				-0.9
3,907,305	+				-2.0
3,907,306	-				-2.5
3,907,309	-				+0.5
3,907,394	+		EFB2_03731	0.13	+0.5
3,907,394	+		EFB2_03731	0.13	-2.2
3,907,394	+		EFB2_03731	0.13	-1.8
3,907,395	-		EFB2_03731	0.13	+0.2
3,907,395	-		EFB2_03731	0.13	-2.5
3,907,398	+		EFB2_03731	0.13	+0.5
3,907,398	+		EFB2_03731	0.13	-2.8
3,907,399	-		EFB2_03731	0.13	-0.2
3,907,494	-		EFB2_03731	0.28	+1.2
3,907,494	-		EFB2_03731	0.28	+0.0
3,907,509	+		EFB2_03731	0.30	-2.0
3,907,566	+		EFB2_03731	0.38	-0.2
3,907,610	+		EFB2_03731	0.45	-2.8
3,907,633	-		EFB2_03731	0.48	+0.9
3,907,633	-		EFB2_03731	0.48	+1.0
3,907,633	-		EFB2_03731	0.48	+0.6
3,907,644	-		EFB2_03731	0.50	+1.1
3,907,665	-		EFB2_03731	0.53	-0.2
3,907,684	-		EFB2_03731	0.56	+0.0
3,907,696	+		EFB2_03731	0.58	-0.6
3,907,696	+		EFB2_03731	0.58	-2.1
3,907,697	-		EFB2_03731	0.58	+0.8
3,907,708	+		EFB2_03731	0.60	-0.2
3,907,708	+		EFB2_03731	0.60	-1.5
3,907,739	+		EFB2_03731	0.64	-0.6
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