Strain Fitness in Escherichia fergusonii Becca around EFB2_01553

Experiment: BHIS no phage control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control
1,624,905	+				+1.5
1,624,905	+				-0.3
1,624,905	+				-0.9
1,624,906	-				+1.6
1,624,906	-				-2.3
1,624,920	+				-1.2
1,624,920	+				-0.4
1,624,925	+				-1.0
1,624,926	-				-1.9
1,624,952	-				-0.8
1,625,009	+		EFB2_01552	0.13	-1.1
1,625,009	+		EFB2_01552	0.13	+0.5
1,625,009	+		EFB2_01552	0.13	-0.4
1,625,009	+		EFB2_01552	0.13	-1.2
1,625,009	+		EFB2_01552	0.13	+0.6
1,625,009	+		EFB2_01552	0.13	-2.4
1,625,009	+		EFB2_01552	0.13	+1.7
1,625,010	-		EFB2_01552	0.13	+0.8
1,625,010	-		EFB2_01552	0.13	-0.8
1,625,043	+		EFB2_01552	0.17	+2.3
1,625,044	-		EFB2_01552	0.17	-1.6
1,625,061	+		EFB2_01552	0.20	-0.8
1,625,061	+		EFB2_01552	0.20	-2.3
1,625,061	+		EFB2_01552	0.20	-0.6
1,625,061	+		EFB2_01552	0.20	-2.4
1,625,061	+		EFB2_01552	0.20	-3.2
1,625,061	+		EFB2_01552	0.20	-1.2
1,625,062	-		EFB2_01552	0.20	-1.6
1,625,062	-		EFB2_01552	0.20	+0.3
1,625,062	-		EFB2_01552	0.20	-0.3
1,625,062	-		EFB2_01552	0.20	+0.0
1,625,062	-		EFB2_01552	0.20	-1.7
1,625,062	-		EFB2_01552	0.20	-2.5
1,625,174	+		EFB2_01552	0.34	+1.4
1,625,174	+		EFB2_01552	0.34	+1.6
1,625,175	-		EFB2_01552	0.34	+1.9
1,625,175	-		EFB2_01552	0.34	-0.4
1,625,198	+		EFB2_01552	0.37	-0.2
1,625,198	+		EFB2_01552	0.37	-1.2
1,625,199	-		EFB2_01552	0.37	-2.2
1,625,226	+		EFB2_01552	0.41	+2.7
1,625,226	+		EFB2_01552	0.41	-1.9
1,625,226	+		EFB2_01552	0.41	+1.1
1,625,226	+		EFB2_01552	0.41	-3.4
1,625,227	-		EFB2_01552	0.41	-2.2
1,625,227	-		EFB2_01552	0.41	-0.2
1,625,227	-		EFB2_01552	0.41	+0.9
1,625,311	+		EFB2_01552	0.52	+1.6
1,625,312	-		EFB2_01552	0.52	+1.3
1,625,312	-		EFB2_01552	0.52	-2.2
1,625,312	-		EFB2_01552	0.52	-1.7
1,625,312	-		EFB2_01552	0.52	+1.5
1,625,331	-		EFB2_01552	0.55	-0.3
1,625,394	+		EFB2_01552	0.63	-1.7
1,625,394	+		EFB2_01552	0.63	-1.0
1,625,429	+		EFB2_01552	0.67	-2.0
1,625,445	+		EFB2_01552	0.69	-1.4
1,625,445	+		EFB2_01552	0.69	-2.2
1,625,445	+		EFB2_01552	0.69	+0.7
1,625,445	+		EFB2_01552	0.69	-2.1
1,625,445	+		EFB2_01552	0.69	+0.8
1,625,445	+		EFB2_01552	0.69	-1.2
1,625,446	-		EFB2_01552	0.69	-1.6
1,625,446	-		EFB2_01552	0.69	+0.3
1,625,446	-		EFB2_01552	0.69	+1.1
1,625,446	-		EFB2_01552	0.69	+0.4
1,625,446	-		EFB2_01552	0.69	-1.0
1,625,446	-		EFB2_01552	0.69	-0.5
1,625,446	-		EFB2_01552	0.69	-2.3
1,625,471	+		EFB2_01552	0.73	-0.4
1,625,487	+		EFB2_01552	0.75	+1.5
1,625,487	+		EFB2_01552	0.75	-0.1
1,625,488	-		EFB2_01552	0.75	-2.1
1,625,488	-		EFB2_01552	0.75	+0.7
1,625,490	+		EFB2_01552	0.75	-1.5
1,625,490	+		EFB2_01552	0.75	-1.6
1,625,490	+		EFB2_01552	0.75	-0.4
1,625,490	+		EFB2_01552	0.75	-0.1
1,625,490	+		EFB2_01552	0.75	+0.2
1,625,490	+		EFB2_01552	0.75	+0.8
1,625,491	-		EFB2_01552	0.75	+1.6
1,625,491	-		EFB2_01552	0.75	+2.2
1,625,491	-		EFB2_01552	0.75	+1.8
1,625,528	+		EFB2_01552	0.80	+1.7
1,625,528	+		EFB2_01552	0.80	-1.4
1,625,528	+		EFB2_01552	0.80	-0.7
1,625,529	-		EFB2_01552	0.80	-1.9
1,625,565	+		EFB2_01552	0.85	+1.1
1,625,597	+		EFB2_01552	0.89	+1.6
1,625,597	+		EFB2_01552	0.89	-0.7
1,625,598	-		EFB2_01552	0.89	+3.0
1,625,625	-				-0.3
1,625,776	+				-0.3
1,625,826	+				-1.4
1,625,827	-				-2.7
1,625,827	-				+0.2
1,625,827	-				-2.4
1,625,838	-				+1.2
1,625,854	-				-0.8
1,625,915	+				-0.4
1,625,916	-				-2.7
1,625,916	-				+1.7
1,625,916	-				-2.7
1,625,919	+				+0.0
1,625,958	+				-1.4
1,625,958	+				-2.1
1,625,959	-				-3.7
1,626,012	+		EFB2_01553	0.15	+1.3
1,626,013	-		EFB2_01553	0.15	-0.1
1,626,033	+		EFB2_01553	0.17	-2.2
1,626,034	-		EFB2_01553	0.18	-1.5
1,626,034	-		EFB2_01553	0.18	+0.6
1,626,056	-		EFB2_01553	0.20	-2.5
1,626,056	-		EFB2_01553	0.20	-0.2
1,626,105	+		EFB2_01553	0.25	-0.2
1,626,105	+		EFB2_01553	0.25	+0.1
1,626,105	+		EFB2_01553	0.25	+0.0
1,626,105	+		EFB2_01553	0.25	-0.3
1,626,105	+		EFB2_01553	0.25	+0.4
1,626,105	+		EFB2_01553	0.25	+1.1
1,626,105	+		EFB2_01553	0.25	+1.8
1,626,105	+		EFB2_01553	0.25	-1.0
1,626,106	-		EFB2_01553	0.26	+0.3
1,626,106	-		EFB2_01553	0.26	-2.0
1,626,106	-		EFB2_01553	0.26	-1.7
1,626,106	-		EFB2_01553	0.26	-2.7
1,626,106	-		EFB2_01553	0.26	-0.2
1,626,109	+		EFB2_01553	0.26	-2.2
1,626,109	+		EFB2_01553	0.26	+1.0
1,626,109	+		EFB2_01553	0.26	-0.2
1,626,109	+		EFB2_01553	0.26	+1.4
1,626,109	+		EFB2_01553	0.26	-2.0
1,626,109	+		EFB2_01553	0.26	+1.1
1,626,109	+		EFB2_01553	0.26	+0.8
1,626,109	+		EFB2_01553	0.26	+0.7
1,626,109	+		EFB2_01553	0.26	+0.3
1,626,109	+		EFB2_01553	0.26	-0.9
1,626,109	+		EFB2_01553	0.26	+1.8
1,626,110	-		EFB2_01553	0.26	-0.8
1,626,110	-		EFB2_01553	0.26	-0.7
1,626,110	-		EFB2_01553	0.26	+1.8
1,626,110	-		EFB2_01553	0.26	+3.0
1,626,110	-		EFB2_01553	0.26	+0.6
1,626,110	-		EFB2_01553	0.26	-1.0
1,626,110	-		EFB2_01553	0.26	-0.5
1,626,110	-		EFB2_01553	0.26	+2.8
1,626,110	-		EFB2_01553	0.26	+1.9
1,626,110	-		EFB2_01553	0.26	-0.5
1,626,110	-		EFB2_01553	0.26	+1.1
1,626,120	-		EFB2_01553	0.27	+0.3
1,626,120	-		EFB2_01553	0.27	-3.1
1,626,120	-		EFB2_01553	0.27	+0.1
1,626,132	+		EFB2_01553	0.29	+1.1
1,626,132	+		EFB2_01553	0.29	+1.3
1,626,133	-		EFB2_01553	0.29	-2.2
1,626,170	-		EFB2_01553	0.33	-0.2
1,626,170	-		EFB2_01553	0.33	+0.9
1,626,209	-		EFB2_01553	0.37	+1.3
1,626,209	-		EFB2_01553	0.37	+0.3
1,626,209	-		EFB2_01553	0.37	+1.3
1,626,210	+		EFB2_01553	0.37	+0.2
1,626,210	+		EFB2_01553	0.37	-2.3
1,626,210	+		EFB2_01553	0.37	+0.4
1,626,210	+		EFB2_01553	0.37	-0.5
1,626,210	+		EFB2_01553	0.37	-3.8
1,626,210	+		EFB2_01553	0.37	+1.2
1,626,211	-		EFB2_01553	0.37	+0.3
1,626,211	-		EFB2_01553	0.37	-0.3
1,626,211	-		EFB2_01553	0.37	+0.3
1,626,244	+		EFB2_01553	0.41	+0.3
1,626,244	+		EFB2_01553	0.41	-2.2
1,626,244	+		EFB2_01553	0.41	+0.4
1,626,244	+		EFB2_01553	0.41	-2.2
1,626,245	-		EFB2_01553	0.41	-0.9
1,626,351	+		EFB2_01553	0.53	+0.0
1,626,352	-		EFB2_01553	0.53	-1.6
1,626,355	-		EFB2_01553	0.54	-0.6
1,626,378	+		EFB2_01553	0.56	-1.1
1,626,379	-		EFB2_01553	0.56	+2.3
1,626,410	+		EFB2_01553	0.60	-3.0
1,626,410	+		EFB2_01553	0.60	+1.2
1,626,411	-		EFB2_01553	0.60	+1.3
1,626,423	+		EFB2_01553	0.61	-0.8
1,626,423	+		EFB2_01553	0.61	-0.1
1,626,423	+		EFB2_01553	0.61	+0.4
1,626,424	-		EFB2_01553	0.61	+3.1
1,626,424	-		EFB2_01553	0.61	-0.5
1,626,424	-		EFB2_01553	0.61	+0.1
1,626,473	+		EFB2_01553	0.67	-4.7
1,626,473	+		EFB2_01553	0.67	-1.9
1,626,473	+		EFB2_01553	0.67	-0.8
1,626,473	+		EFB2_01553	0.67	+0.1
1,626,473	+		EFB2_01553	0.67	+0.7
1,626,474	-		EFB2_01553	0.67	-1.3
1,626,474	-		EFB2_01553	0.67	+2.3
1,626,478	-		EFB2_01553	0.67	+0.1
1,626,489	+		EFB2_01553	0.69	-0.1
1,626,489	+		EFB2_01553	0.69	+0.1
1,626,490	-		EFB2_01553	0.69	-3.4
1,626,490	-		EFB2_01553	0.69	+0.6
1,626,503	+		EFB2_01553	0.70	-0.5
1,626,503	+		EFB2_01553	0.70	+0.6
1,626,504	-		EFB2_01553	0.70	-0.2
1,626,504	-		EFB2_01553	0.70	+0.4
1,626,504	-		EFB2_01553	0.70	-1.5
1,626,504	-		EFB2_01553	0.70	+0.7
1,626,517	-		EFB2_01553	0.72	-2.7
1,626,517	-		EFB2_01553	0.72	+1.2
1,626,517	-		EFB2_01553	0.72	+0.3
1,626,517	-		EFB2_01553	0.72	-1.2
1,626,520	+		EFB2_01553	0.72	+0.9
1,626,520	+		EFB2_01553	0.72	+0.6
1,626,520	+		EFB2_01553	0.72	-1.5
1,626,520	+		EFB2_01553	0.72	+1.4
1,626,521	-		EFB2_01553	0.72	+2.4
1,626,521	-		EFB2_01553	0.72	-1.8
1,626,524	+		EFB2_01553	0.73	+0.3
1,626,524	+		EFB2_01553	0.73	-0.9
1,626,524	+		EFB2_01553	0.73	+2.2
1,626,524	+		EFB2_01553	0.73	+0.6
1,626,524	+		EFB2_01553	0.73	-0.0
1,626,524	+		EFB2_01553	0.73	-0.5
1,626,525	-		EFB2_01553	0.73	-0.3
1,626,525	-		EFB2_01553	0.73	+0.7
1,626,527	+		EFB2_01553	0.73	-3.7
1,626,527	+		EFB2_01553	0.73	+0.2
1,626,527	+		EFB2_01553	0.73	-0.2
1,626,527	+		EFB2_01553	0.73	-0.6
1,626,528	-		EFB2_01553	0.73	+1.3
1,626,528	-		EFB2_01553	0.73	+1.8
1,626,528	-		EFB2_01553	0.73	-0.1
1,626,528	-		EFB2_01553	0.73	+0.5
1,626,528	-		EFB2_01553	0.73	+0.0
1,626,528	-		EFB2_01553	0.73	-0.7
1,626,528	-		EFB2_01553	0.73	-2.4
1,626,561	+		EFB2_01553	0.77	-2.9
1,626,561	+		EFB2_01553	0.77	-1.2
1,626,562	-		EFB2_01553	0.77	-1.4
1,626,562	-		EFB2_01553	0.77	-0.1
1,626,573	-		EFB2_01553	0.78	-0.2
1,626,573	-		EFB2_01553	0.78	+1.4
1,626,626	+		EFB2_01553	0.84	-0.6
1,626,626	+		EFB2_01553	0.84	+0.4
1,626,626	+		EFB2_01553	0.84	+0.2
1,626,626	+		EFB2_01553	0.84	+0.4
1,626,626	+		EFB2_01553	0.84	+1.2
1,626,626	+		EFB2_01553	0.84	+1.2
1,626,627	-		EFB2_01553	0.84	-1.4
1,626,627	-		EFB2_01553	0.84	+1.1
1,626,627	-		EFB2_01553	0.84	-1.2
1,626,750	+				+0.3
1,626,766	+				-0.6
1,626,775	-				+1.3
1,626,787	+				+1.5
1,626,787	+				-1.8
1,626,787	+				-0.7
1,626,787	+				-1.1
1,626,788	-				-3.8
1,626,807	+				-2.3
1,626,808	-				+0.5
1,626,846	+				+0.9
1,626,847	-				-0.8
1,626,913	-		EFB2_01554	0.11	-2.1
1,626,913	-		EFB2_01554	0.11	+1.3
1,626,913	-		EFB2_01554	0.11	+0.4
1,626,915	+		EFB2_01554	0.11	+1.5
1,626,916	-		EFB2_01554	0.11	-3.8
1,626,916	-		EFB2_01554	0.11	-0.7
1,626,916	-		EFB2_01554	0.11	-2.0
1,626,916	-		EFB2_01554	0.11	+1.4
1,626,916	-		EFB2_01554	0.11	-0.4
1,626,939	+		EFB2_01554	0.14	-0.9
1,627,033	+		EFB2_01554	0.24	+0.3
1,627,046	+		EFB2_01554	0.26	-2.6
1,627,047	-		EFB2_01554	0.26	+1.0
1,627,047	-		EFB2_01554	0.26	+1.2
1,627,047	-		EFB2_01554	0.26	+0.5
1,627,049	+		EFB2_01554	0.26	+1.3
1,627,049	+		EFB2_01554	0.26	+1.1
1,627,049	+		EFB2_01554	0.26	+0.8
1,627,049	+		EFB2_01554	0.26	+0.0
1,627,049	+		EFB2_01554	0.26	+1.6
1,627,049	+		EFB2_01554	0.26	-2.3
1,627,049	+		EFB2_01554	0.26	+0.8
1,627,049	+		EFB2_01554	0.26	-2.0
1,627,049	+		EFB2_01554	0.26	-0.1
1,627,049	+		EFB2_01554	0.26	+0.4
1,627,050	-		EFB2_01554	0.26	+1.0
1,627,050	-		EFB2_01554	0.26	-3.0
1,627,050	-		EFB2_01554	0.26	+0.4
1,627,050	-		EFB2_01554	0.26	+0.4
1,627,050	-		EFB2_01554	0.26	-1.4
1,627,050	-		EFB2_01554	0.26	+0.6
1,627,050	-		EFB2_01554	0.26	-0.2
1,627,050	-		EFB2_01554	0.26	-1.0
1,627,050	-		EFB2_01554	0.26	+1.3
1,627,050	-		EFB2_01554	0.26	-0.0
1,627,050	-		EFB2_01554	0.26	-0.7
1,627,050	-		EFB2_01554	0.26	-0.3
1,627,050	-		EFB2_01554	0.26	+1.6
1,627,050	-		EFB2_01554	0.26	+0.2
1,627,050	-		EFB2_01554	0.26	+0.7
1,627,050	-		EFB2_01554	0.26	-0.4
1,627,088	+		EFB2_01554	0.30	+0.1
1,627,089	-		EFB2_01554	0.31	+0.4
1,627,100	+		EFB2_01554	0.32	+1.1
1,627,101	-		EFB2_01554	0.32	-1.0
1,627,109	+		EFB2_01554	0.33	-2.4
1,627,109	+		EFB2_01554	0.33	-2.9
1,627,110	-		EFB2_01554	0.33	+1.6
1,627,110	-		EFB2_01554	0.33	+1.3
1,627,110	-		EFB2_01554	0.33	-1.4
1,627,126	+		EFB2_01554	0.35	-1.6
1,627,126	+		EFB2_01554	0.35	-1.7
1,627,194	-		EFB2_01554	0.42	+0.1
1,627,215	+		EFB2_01554	0.45	-2.7
1,627,296	-		EFB2_01554	0.54	+0.0
1,627,296	-		EFB2_01554	0.54	-1.7
1,627,296	-		EFB2_01554	0.54	+1.1
1,627,296	-		EFB2_01554	0.54	-0.8
1,627,296	-		EFB2_01554	0.54	-1.7
1,627,301	+		EFB2_01554	0.54	+1.9
1,627,302	-		EFB2_01554	0.54	-0.3
1,627,311	-		EFB2_01554	0.55	+0.3
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1,627,347	+		EFB2_01554	0.59	-3.2
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1,627,347	+		EFB2_01554	0.59	-2.9
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1,627,348	-		EFB2_01554	0.60	-1.9
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1,627,361	-		EFB2_01554	0.61	+1.8
1,627,439	+		EFB2_01554	0.70	-3.1
1,627,440	-		EFB2_01554	0.70	+0.7
1,627,440	-		EFB2_01554	0.70	-3.4
1,627,569	+		EFB2_01554	0.84	-0.4
1,627,569	+		EFB2_01554	0.84	-2.6
1,627,570	-		EFB2_01554	0.84	-0.2
1,627,614	-		EFB2_01554	0.89	-0.2
1,627,677	+				-0.2
1,627,677	+				+1.5
1,627,677	+				-1.7
1,627,678	-				+1.6
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1,627,701	+				-0.9
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1,627,702	-				-3.2
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1,627,723	-				-0.5
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