Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00614 and OHPLBJKB_00615 are separated by 282 nucleotides OHPLBJKB_00615 and OHPLBJKB_00616 are separated by 78 nucleotides OHPLBJKB_00616 and OHPLBJKB_00617 are separated by 76 nucleotides
OHPLBJKB_00614: OHPLBJKB_00614 - Putative membrane-bound redox modulator Alx, at 628,020 to 628,985
_00614
OHPLBJKB_00615: OHPLBJKB_00615 - scyllo-inositol 2-dehydrogenase (NADP(+)) IolU, at 629,268 to 630,254
_00615
OHPLBJKB_00616: OHPLBJKB_00616 - hypothetical protein, at 630,333 to 631,016
_00616
OHPLBJKB_00617: OHPLBJKB_00617 - UTP pyrophosphatase, at 631,093 to 631,596
_00617
Position (kb) 629
630
631 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 628.384 kb on + strand, within OHPLBJKB_00614 at 628.384 kb on + strand, within OHPLBJKB_00614 at 628.400 kb on + strand, within OHPLBJKB_00614 at 628.400 kb on + strand, within OHPLBJKB_00614 at 628.401 kb on - strand, within OHPLBJKB_00614 at 628.401 kb on - strand, within OHPLBJKB_00614 at 628.401 kb on - strand, within OHPLBJKB_00614 at 628.401 kb on - strand, within OHPLBJKB_00614 at 628.551 kb on - strand, within OHPLBJKB_00614 at 628.552 kb on + strand, within OHPLBJKB_00614 at 628.552 kb on + strand, within OHPLBJKB_00614 at 628.553 kb on - strand, within OHPLBJKB_00614 at 628.553 kb on - strand, within OHPLBJKB_00614 at 628.553 kb on - strand, within OHPLBJKB_00614 at 628.553 kb on - strand, within OHPLBJKB_00614 at 628.553 kb on - strand, within OHPLBJKB_00614 at 628.636 kb on + strand, within OHPLBJKB_00614 at 628.637 kb on - strand, within OHPLBJKB_00614 at 628.656 kb on + strand, within OHPLBJKB_00614 at 628.656 kb on + strand, within OHPLBJKB_00614 at 628.656 kb on + strand, within OHPLBJKB_00614 at 628.657 kb on - strand, within OHPLBJKB_00614 at 628.657 kb on - strand, within OHPLBJKB_00614 at 628.657 kb on - strand, within OHPLBJKB_00614 at 628.678 kb on + strand, within OHPLBJKB_00614 at 628.801 kb on + strand, within OHPLBJKB_00614 at 628.802 kb on - strand, within OHPLBJKB_00614 at 628.828 kb on - strand, within OHPLBJKB_00614 at 628.928 kb on + strand at 628.960 kb on - strand at 628.979 kb on + strand at 628.980 kb on - strand at 628.985 kb on + strand at 628.985 kb on + strand at 628.985 kb on + strand at 628.986 kb on - strand at 628.986 kb on - strand at 628.986 kb on - strand at 628.996 kb on + strand at 628.996 kb on + strand at 628.997 kb on - strand at 629.003 kb on - strand at 629.045 kb on - strand at 629.050 kb on + strand at 629.050 kb on + strand at 629.050 kb on + strand at 629.050 kb on + strand at 629.050 kb on + strand at 629.050 kb on + strand at 629.051 kb on - strand at 629.051 kb on - strand at 629.051 kb on - strand at 629.051 kb on - strand at 629.051 kb on - strand at 629.051 kb on - strand at 629.079 kb on + strand at 629.080 kb on - strand at 629.080 kb on - strand at 629.095 kb on + strand at 629.095 kb on + strand at 629.095 kb on + strand at 629.095 kb on + strand at 629.095 kb on + strand at 629.096 kb on - strand at 629.096 kb on - strand at 629.154 kb on - strand at 629.180 kb on - strand at 629.203 kb on + strand at 629.204 kb on - strand at 629.236 kb on + strand at 629.236 kb on + strand at 629.236 kb on + strand at 629.237 kb on - strand at 629.237 kb on - strand at 629.237 kb on - strand at 629.240 kb on + strand at 629.241 kb on - strand at 629.270 kb on - strand at 629.272 kb on - strand at 629.277 kb on + strand at 629.277 kb on + strand at 629.283 kb on - strand at 629.414 kb on - strand, within OHPLBJKB_00615 at 629.423 kb on + strand, within OHPLBJKB_00615 at 629.423 kb on + strand, within OHPLBJKB_00615 at 629.423 kb on + strand, within OHPLBJKB_00615 at 629.423 kb on + strand, within OHPLBJKB_00615 at 629.424 kb on - strand, within OHPLBJKB_00615 at 629.424 kb on - strand, within OHPLBJKB_00615 at 629.424 kb on - strand, within OHPLBJKB_00615 at 629.424 kb on - strand, within OHPLBJKB_00615 at 629.426 kb on + strand, within OHPLBJKB_00615 at 629.426 kb on + strand, within OHPLBJKB_00615 at 629.427 kb on - strand, within OHPLBJKB_00615 at 629.427 kb on - strand, within OHPLBJKB_00615 at 629.427 kb on - strand, within OHPLBJKB_00615 at 629.429 kb on + strand, within OHPLBJKB_00615 at 629.429 kb on + strand, within OHPLBJKB_00615 at 629.429 kb on + strand, within OHPLBJKB_00615 at 629.429 kb on + strand, within OHPLBJKB_00615 at 629.429 kb on + strand, within OHPLBJKB_00615 at 629.429 kb on + strand, within OHPLBJKB_00615 at 629.429 kb on + strand, within OHPLBJKB_00615 at 629.430 kb on - strand, within OHPLBJKB_00615 at 629.430 kb on - strand, within OHPLBJKB_00615 at 629.430 kb on - strand, within OHPLBJKB_00615 at 629.430 kb on - strand, within OHPLBJKB_00615 at 629.682 kb on + strand, within OHPLBJKB_00615 at 629.707 kb on + strand, within OHPLBJKB_00615 at 629.707 kb on + strand, within OHPLBJKB_00615 at 629.723 kb on + strand, within OHPLBJKB_00615 at 629.735 kb on + strand, within OHPLBJKB_00615 at 629.780 kb on - strand, within OHPLBJKB_00615 at 629.800 kb on + strand, within OHPLBJKB_00615 at 629.800 kb on + strand, within OHPLBJKB_00615 at 629.810 kb on - strand, within OHPLBJKB_00615 at 629.891 kb on + strand, within OHPLBJKB_00615 at 629.996 kb on + strand, within OHPLBJKB_00615 at 629.997 kb on - strand, within OHPLBJKB_00615 at 630.051 kb on - strand, within OHPLBJKB_00615 at 630.052 kb on + strand, within OHPLBJKB_00615 at 630.052 kb on + strand, within OHPLBJKB_00615 at 630.052 kb on + strand, within OHPLBJKB_00615 at 630.052 kb on + strand, within OHPLBJKB_00615 at 630.053 kb on - strand, within OHPLBJKB_00615 at 630.053 kb on - strand, within OHPLBJKB_00615 at 630.053 kb on - strand, within OHPLBJKB_00615 at 630.160 kb on + strand at 630.161 kb on - strand at 630.161 kb on - strand at 630.162 kb on + strand at 630.162 kb on + strand at 630.162 kb on + strand at 630.163 kb on - strand at 630.178 kb on + strand at 630.178 kb on + strand at 630.178 kb on + strand at 630.179 kb on - strand at 630.179 kb on - strand at 630.179 kb on - strand at 630.182 kb on + strand at 630.249 kb on + strand at 630.249 kb on + strand at 630.250 kb on - strand at 630.255 kb on - strand at 630.273 kb on - strand at 630.294 kb on + strand at 630.294 kb on + strand at 630.294 kb on + strand at 630.294 kb on + strand at 630.294 kb on + strand at 630.295 kb on - strand at 630.295 kb on - strand at 630.295 kb on - strand at 630.295 kb on - strand at 630.295 kb on - strand at 630.327 kb on + strand at 630.328 kb on - strand at 630.335 kb on - strand at 630.335 kb on - strand at 630.362 kb on + strand at 630.394 kb on + strand at 630.394 kb on + strand at 630.394 kb on + strand at 630.485 kb on + strand, within OHPLBJKB_00616 at 630.486 kb on - strand, within OHPLBJKB_00616 at 630.503 kb on + strand, within OHPLBJKB_00616 at 630.557 kb on + strand, within OHPLBJKB_00616 at 630.576 kb on - strand, within OHPLBJKB_00616 at 630.585 kb on - strand, within OHPLBJKB_00616 at 630.701 kb on + strand, within OHPLBJKB_00616 at 630.702 kb on - strand, within OHPLBJKB_00616 at 630.702 kb on - strand, within OHPLBJKB_00616 at 630.744 kb on + strand, within OHPLBJKB_00616 at 630.744 kb on + strand, within OHPLBJKB_00616 at 630.745 kb on - strand, within OHPLBJKB_00616 at 630.745 kb on - strand, within OHPLBJKB_00616 at 630.745 kb on - strand, within OHPLBJKB_00616 at 630.745 kb on - strand, within OHPLBJKB_00616 at 630.775 kb on + strand, within OHPLBJKB_00616 at 630.797 kb on + strand, within OHPLBJKB_00616 at 630.797 kb on + strand, within OHPLBJKB_00616 at 630.798 kb on - strand, within OHPLBJKB_00616 at 630.812 kb on - strand, within OHPLBJKB_00616 at 630.840 kb on + strand, within OHPLBJKB_00616 at 630.943 kb on - strand, within OHPLBJKB_00616 at 630.944 kb on + strand, within OHPLBJKB_00616 at 630.944 kb on + strand, within OHPLBJKB_00616 at 630.944 kb on + strand, within OHPLBJKB_00616 at 630.945 kb on - strand, within OHPLBJKB_00616 at 630.945 kb on - strand, within OHPLBJKB_00616 at 630.968 kb on + strand at 630.969 kb on - strand at 630.992 kb on + strand at 630.992 kb on + strand at 630.993 kb on - strand at 631.173 kb on + strand, within OHPLBJKB_00617 at 631.174 kb on - strand, within OHPLBJKB_00617 at 631.203 kb on + strand, within OHPLBJKB_00617 at 631.204 kb on - strand, within OHPLBJKB_00617 at 631.248 kb on + strand, within OHPLBJKB_00617 at 631.248 kb on + strand, within OHPLBJKB_00617 at 631.249 kb on - strand, within OHPLBJKB_00617 at 631.253 kb on - strand, within OHPLBJKB_00617
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 628,384 + OHPLBJKB_00614 0.38 -0.6 628,384 + OHPLBJKB_00614 0.38 +0.7 628,400 + OHPLBJKB_00614 0.39 -0.7 628,400 + OHPLBJKB_00614 0.39 +0.5 628,401 - OHPLBJKB_00614 0.39 -1.7 628,401 - OHPLBJKB_00614 0.39 +0.5 628,401 - OHPLBJKB_00614 0.39 +0.2 628,401 - OHPLBJKB_00614 0.39 -1.4 628,551 - OHPLBJKB_00614 0.55 +0.9 628,552 + OHPLBJKB_00614 0.55 -1.6 628,552 + OHPLBJKB_00614 0.55 -0.4 628,553 - OHPLBJKB_00614 0.55 +1.1 628,553 - OHPLBJKB_00614 0.55 +1.8 628,553 - OHPLBJKB_00614 0.55 -1.7 628,553 - OHPLBJKB_00614 0.55 -0.7 628,553 - OHPLBJKB_00614 0.55 +0.8 628,636 + OHPLBJKB_00614 0.64 -0.2 628,637 - OHPLBJKB_00614 0.64 +0.8 628,656 + OHPLBJKB_00614 0.66 +0.1 628,656 + OHPLBJKB_00614 0.66 +0.1 628,656 + OHPLBJKB_00614 0.66 +0.3 628,657 - OHPLBJKB_00614 0.66 +1.5 628,657 - OHPLBJKB_00614 0.66 +0.2 628,657 - OHPLBJKB_00614 0.66 +0.6 628,678 + OHPLBJKB_00614 0.68 +0.8 628,801 + OHPLBJKB_00614 0.81 -0.2 628,802 - OHPLBJKB_00614 0.81 -0.3 628,828 - OHPLBJKB_00614 0.84 -0.7 628,928 + -0.2 628,960 - -0.4 628,979 + +0.4 628,980 - -0.2 628,985 + +0.3 628,985 + -0.5 628,985 + -1.0 628,986 - -1.2 628,986 - +0.6 628,986 - +0.2 628,996 + -0.3 628,996 + -0.1 628,997 - +0.8 629,003 - +0.0 629,045 - +0.3 629,050 + +1.8 629,050 + -1.0 629,050 + +0.4 629,050 + +0.4 629,050 + -0.6 629,050 + +1.4 629,051 - +0.4 629,051 - -0.3 629,051 - +0.1 629,051 - +0.9 629,051 - -0.7 629,051 - -0.5 629,079 + -0.5 629,080 - +0.2 629,080 - +0.2 629,095 + -0.4 629,095 + -0.9 629,095 + +0.1 629,095 + +0.4 629,095 + +0.0 629,096 - +0.8 629,096 - +0.3 629,154 - +0.4 629,180 - -0.4 629,203 + +0.1 629,204 - -0.8 629,236 + -0.3 629,236 + +0.7 629,236 + -1.1 629,237 - +0.4 629,237 - +0.3 629,237 - +0.5 629,240 + +0.3 629,241 - +0.1 629,270 - -1.1 629,272 - -1.0 629,277 + -1.9 629,277 + -1.3 629,283 - -0.9 629,414 - OHPLBJKB_00615 0.15 -1.5 629,423 + OHPLBJKB_00615 0.16 +0.4 629,423 + OHPLBJKB_00615 0.16 +0.3 629,423 + OHPLBJKB_00615 0.16 -0.7 629,423 + OHPLBJKB_00615 0.16 -1.6 629,424 - OHPLBJKB_00615 0.16 +0.1 629,424 - OHPLBJKB_00615 0.16 -0.5 629,424 - OHPLBJKB_00615 0.16 -0.2 629,424 - OHPLBJKB_00615 0.16 +1.3 629,426 + OHPLBJKB_00615 0.16 -1.3 629,426 + OHPLBJKB_00615 0.16 +0.3 629,427 - OHPLBJKB_00615 0.16 +3.1 629,427 - OHPLBJKB_00615 0.16 -0.6 629,427 - OHPLBJKB_00615 0.16 -1.3 629,429 + OHPLBJKB_00615 0.16 -1.0 629,429 + OHPLBJKB_00615 0.16 -0.3 629,429 + OHPLBJKB_00615 0.16 -0.9 629,429 + OHPLBJKB_00615 0.16 -1.3 629,429 + OHPLBJKB_00615 0.16 -0.2 629,429 + OHPLBJKB_00615 0.16 -0.0 629,429 + OHPLBJKB_00615 0.16 -0.7 629,430 - OHPLBJKB_00615 0.16 +0.3 629,430 - OHPLBJKB_00615 0.16 +0.5 629,430 - OHPLBJKB_00615 0.16 -0.4 629,430 - OHPLBJKB_00615 0.16 -0.6 629,682 + OHPLBJKB_00615 0.42 +0.1 629,707 + OHPLBJKB_00615 0.44 +0.9 629,707 + OHPLBJKB_00615 0.44 +0.1 629,723 + OHPLBJKB_00615 0.46 +0.6 629,735 + OHPLBJKB_00615 0.47 -0.5 629,780 - OHPLBJKB_00615 0.52 -0.4 629,800 + OHPLBJKB_00615 0.54 +0.3 629,800 + OHPLBJKB_00615 0.54 +0.1 629,810 - OHPLBJKB_00615 0.55 -0.2 629,891 + OHPLBJKB_00615 0.63 -1.5 629,996 + OHPLBJKB_00615 0.74 -1.0 629,997 - OHPLBJKB_00615 0.74 +1.0 630,051 - OHPLBJKB_00615 0.79 -0.6 630,052 + OHPLBJKB_00615 0.79 -0.0 630,052 + OHPLBJKB_00615 0.79 -0.2 630,052 + OHPLBJKB_00615 0.79 +0.2 630,052 + OHPLBJKB_00615 0.79 +0.7 630,053 - OHPLBJKB_00615 0.80 -0.9 630,053 - OHPLBJKB_00615 0.80 +0.2 630,053 - OHPLBJKB_00615 0.80 +0.5 630,160 + +1.0 630,161 - -0.5 630,161 - +0.3 630,162 + -0.2 630,162 + +0.8 630,162 + +0.3 630,163 - +0.5 630,178 + -0.3 630,178 + +0.4 630,178 + +0.7 630,179 - -0.1 630,179 - +0.1 630,179 - -0.5 630,182 + +0.0 630,249 + +0.2 630,249 + +0.3 630,250 - +0.3 630,255 - +0.3 630,273 - -0.1 630,294 + +0.1 630,294 + -1.0 630,294 + +0.2 630,294 + +0.2 630,294 + +0.9 630,295 - -0.3 630,295 - -0.4 630,295 - +1.1 630,295 - -0.4 630,295 - -0.5 630,327 + +0.2 630,328 - -0.6 630,335 - +0.5 630,335 - +0.4 630,362 + +0.1 630,394 + -0.6 630,394 + -0.5 630,394 + -0.5 630,485 + OHPLBJKB_00616 0.22 +0.2 630,486 - OHPLBJKB_00616 0.22 +0.7 630,503 + OHPLBJKB_00616 0.25 -0.8 630,557 + OHPLBJKB_00616 0.33 +0.7 630,576 - OHPLBJKB_00616 0.36 +0.0 630,585 - OHPLBJKB_00616 0.37 -0.9 630,701 + OHPLBJKB_00616 0.54 +1.5 630,702 - OHPLBJKB_00616 0.54 +0.1 630,702 - OHPLBJKB_00616 0.54 +0.1 630,744 + OHPLBJKB_00616 0.60 +0.6 630,744 + OHPLBJKB_00616 0.60 +0.2 630,745 - OHPLBJKB_00616 0.60 +0.4 630,745 - OHPLBJKB_00616 0.60 -0.6 630,745 - OHPLBJKB_00616 0.60 +0.1 630,745 - OHPLBJKB_00616 0.60 -0.0 630,775 + OHPLBJKB_00616 0.65 +0.4 630,797 + OHPLBJKB_00616 0.68 -0.3 630,797 + OHPLBJKB_00616 0.68 -0.2 630,798 - OHPLBJKB_00616 0.68 -1.4 630,812 - OHPLBJKB_00616 0.70 -0.7 630,840 + OHPLBJKB_00616 0.74 +0.4 630,943 - OHPLBJKB_00616 0.89 -0.2 630,944 + OHPLBJKB_00616 0.89 -0.2 630,944 + OHPLBJKB_00616 0.89 -0.2 630,944 + OHPLBJKB_00616 0.89 +0.3 630,945 - OHPLBJKB_00616 0.89 -0.7 630,945 - OHPLBJKB_00616 0.89 +0.5 630,968 + +0.2 630,969 - -0.7 630,992 + -0.9 630,992 + +0.7 630,993 - +0.2 631,173 + OHPLBJKB_00617 0.16 -0.3 631,174 - OHPLBJKB_00617 0.16 -0.2 631,203 + OHPLBJKB_00617 0.22 +0.3 631,204 - OHPLBJKB_00617 0.22 +0.3 631,248 + OHPLBJKB_00617 0.31 +0.5 631,248 + OHPLBJKB_00617 0.31 +0.6 631,249 - OHPLBJKB_00617 0.31 -0.7 631,253 - OHPLBJKB_00617 0.32 +0.5
Or see this region's nucleotide sequence