Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02107

Experiment: lib only

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02106 and OHPLBJKB_02107 are separated by 111 nucleotidesOHPLBJKB_02107 and OHPLBJKB_02108 are separated by 232 nucleotides OHPLBJKB_02106: OHPLBJKB_02106 - Maltose regulon regulatory protein MalI, at 2,181,511 to 2,182,539 _02106 OHPLBJKB_02107: OHPLBJKB_02107 - 7-alpha-hydroxysteroid dehydrogenase, at 2,182,651 to 2,183,418 _02107 OHPLBJKB_02108: OHPLBJKB_02108 - hypothetical protein, at 2,183,651 to 2,184,229 _02108 Position (kb) 2182 2183 2184Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2181.885 kb on - strand, within OHPLBJKB_02106at 2181.973 kb on + strand, within OHPLBJKB_02106at 2181.974 kb on - strand, within OHPLBJKB_02106at 2182.121 kb on - strand, within OHPLBJKB_02106at 2182.223 kb on + strand, within OHPLBJKB_02106at 2182.224 kb on - strand, within OHPLBJKB_02106at 2182.231 kb on - strand, within OHPLBJKB_02106at 2182.258 kb on + strand, within OHPLBJKB_02106at 2182.259 kb on - strand, within OHPLBJKB_02106at 2182.401 kb on + strand, within OHPLBJKB_02106at 2182.401 kb on + strand, within OHPLBJKB_02106at 2182.402 kb on - strand, within OHPLBJKB_02106at 2182.403 kb on + strand, within OHPLBJKB_02106at 2182.403 kb on + strand, within OHPLBJKB_02106at 2182.403 kb on + strand, within OHPLBJKB_02106at 2182.403 kb on + strand, within OHPLBJKB_02106at 2182.403 kb on + strand, within OHPLBJKB_02106at 2182.403 kb on + strand, within OHPLBJKB_02106at 2182.404 kb on - strand, within OHPLBJKB_02106at 2182.404 kb on - strand, within OHPLBJKB_02106at 2182.404 kb on - strand, within OHPLBJKB_02106at 2182.404 kb on - strand, within OHPLBJKB_02106at 2182.404 kb on - strand, within OHPLBJKB_02106at 2182.404 kb on - strand, within OHPLBJKB_02106at 2182.404 kb on - strand, within OHPLBJKB_02106at 2182.411 kb on - strand, within OHPLBJKB_02106at 2182.649 kb on - strandat 2182.776 kb on + strand, within OHPLBJKB_02107at 2182.805 kb on + strand, within OHPLBJKB_02107at 2182.806 kb on - strand, within OHPLBJKB_02107at 2182.857 kb on + strand, within OHPLBJKB_02107at 2182.953 kb on + strand, within OHPLBJKB_02107at 2183.416 kb on + strandat 2183.419 kb on + strandat 2183.420 kb on - strandat 2183.541 kb on - strandat 2183.542 kb on + strandat 2183.543 kb on - strandat 2183.549 kb on - strandat 2183.549 kb on - strandat 2183.567 kb on - strandat 2183.610 kb on + strandat 2183.610 kb on + strandat 2183.611 kb on - strandat 2183.614 kb on + strandat 2183.614 kb on + strandat 2183.614 kb on + strandat 2183.614 kb on + strandat 2183.615 kb on - strandat 2183.627 kb on + strandat 2183.627 kb on + strandat 2183.627 kb on + strandat 2183.627 kb on + strandat 2183.628 kb on - strandat 2183.628 kb on - strandat 2183.628 kb on - strandat 2183.628 kb on - strandat 2183.628 kb on - strandat 2183.784 kb on - strand, within OHPLBJKB_02108at 2183.784 kb on - strand, within OHPLBJKB_02108at 2183.825 kb on - strand, within OHPLBJKB_02108at 2183.825 kb on - strand, within OHPLBJKB_02108at 2183.894 kb on + strand, within OHPLBJKB_02108at 2183.894 kb on + strand, within OHPLBJKB_02108at 2183.894 kb on + strand, within OHPLBJKB_02108at 2183.894 kb on + strand, within OHPLBJKB_02108at 2183.894 kb on + strand, within OHPLBJKB_02108at 2183.894 kb on + strand, within OHPLBJKB_02108at 2183.895 kb on - strand, within OHPLBJKB_02108at 2183.895 kb on - strand, within OHPLBJKB_02108at 2183.895 kb on - strand, within OHPLBJKB_02108at 2183.895 kb on - strand, within OHPLBJKB_02108at 2183.896 kb on + strand, within OHPLBJKB_02108at 2183.897 kb on - strand, within OHPLBJKB_02108at 2183.897 kb on - strand, within OHPLBJKB_02108at 2183.897 kb on - strand, within OHPLBJKB_02108at 2184.011 kb on - strand, within OHPLBJKB_02108at 2184.017 kb on - strand, within OHPLBJKB_02108at 2184.017 kb on - strand, within OHPLBJKB_02108at 2184.017 kb on - strand, within OHPLBJKB_02108at 2184.216 kb on + strandat 2184.259 kb on - strandat 2184.259 kb on - strandat 2184.282 kb on + strandat 2184.283 kb on - strandat 2184.283 kb on - strandat 2184.351 kb on + strandat 2184.351 kb on + strandat 2184.351 kb on + strandat 2184.351 kb on + strandat 2184.351 kb on + strandat 2184.351 kb on + strandat 2184.352 kb on - strandat 2184.352 kb on - strandat 2184.352 kb on - strandat 2184.352 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction lib only
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2,181,885 - OHPLBJKB_02106 0.36 -0.0
2,181,973 + OHPLBJKB_02106 0.45 +1.6
2,181,974 - OHPLBJKB_02106 0.45 +0.5
2,182,121 - OHPLBJKB_02106 0.59 +1.3
2,182,223 + OHPLBJKB_02106 0.69 +0.2
2,182,224 - OHPLBJKB_02106 0.69 +0.0
2,182,231 - OHPLBJKB_02106 0.70 +0.1
2,182,258 + OHPLBJKB_02106 0.73 -0.8
2,182,259 - OHPLBJKB_02106 0.73 +0.3
2,182,401 + OHPLBJKB_02106 0.86 -1.5
2,182,401 + OHPLBJKB_02106 0.86 -1.8
2,182,402 - OHPLBJKB_02106 0.87 -0.6
2,182,403 + OHPLBJKB_02106 0.87 -0.6
2,182,403 + OHPLBJKB_02106 0.87 -2.3
2,182,403 + OHPLBJKB_02106 0.87 +0.1
2,182,403 + OHPLBJKB_02106 0.87 +1.6
2,182,403 + OHPLBJKB_02106 0.87 -0.7
2,182,403 + OHPLBJKB_02106 0.87 -0.0
2,182,404 - OHPLBJKB_02106 0.87 -0.8
2,182,404 - OHPLBJKB_02106 0.87 +0.7
2,182,404 - OHPLBJKB_02106 0.87 +0.3
2,182,404 - OHPLBJKB_02106 0.87 -1.1
2,182,404 - OHPLBJKB_02106 0.87 +1.3
2,182,404 - OHPLBJKB_02106 0.87 +0.2
2,182,404 - OHPLBJKB_02106 0.87 -0.0
2,182,411 - OHPLBJKB_02106 0.87 -1.2
2,182,649 - +1.0
2,182,776 + OHPLBJKB_02107 0.16 +0.8
2,182,805 + OHPLBJKB_02107 0.20 -0.5
2,182,806 - OHPLBJKB_02107 0.20 -1.7
2,182,857 + OHPLBJKB_02107 0.27 +0.4
2,182,953 + OHPLBJKB_02107 0.39 -2.5
2,183,416 + +0.0
2,183,419 + -1.0
2,183,420 - +0.5
2,183,541 - -2.8
2,183,542 + +0.7
2,183,543 - +0.2
2,183,549 - -0.1
2,183,549 - +0.4
2,183,567 - +0.1
2,183,610 + -0.6
2,183,610 + +0.7
2,183,611 - +0.8
2,183,614 + -0.2
2,183,614 + -0.4
2,183,614 + -0.6
2,183,614 + -0.2
2,183,615 - +0.3
2,183,627 + -0.2
2,183,627 + -0.9
2,183,627 + +0.6
2,183,627 + +0.7
2,183,628 - -0.7
2,183,628 - -0.5
2,183,628 - +0.1
2,183,628 - -0.9
2,183,628 - -0.3
2,183,784 - OHPLBJKB_02108 0.23 -0.7
2,183,784 - OHPLBJKB_02108 0.23 +0.9
2,183,825 - OHPLBJKB_02108 0.30 -0.3
2,183,825 - OHPLBJKB_02108 0.30 -0.0
2,183,894 + OHPLBJKB_02108 0.42 -1.1
2,183,894 + OHPLBJKB_02108 0.42 -0.2
2,183,894 + OHPLBJKB_02108 0.42 -0.1
2,183,894 + OHPLBJKB_02108 0.42 -0.5
2,183,894 + OHPLBJKB_02108 0.42 +0.4
2,183,894 + OHPLBJKB_02108 0.42 -1.0
2,183,895 - OHPLBJKB_02108 0.42 -1.5
2,183,895 - OHPLBJKB_02108 0.42 -0.3
2,183,895 - OHPLBJKB_02108 0.42 -0.2
2,183,895 - OHPLBJKB_02108 0.42 +0.8
2,183,896 + OHPLBJKB_02108 0.42 -0.6
2,183,897 - OHPLBJKB_02108 0.42 -1.0
2,183,897 - OHPLBJKB_02108 0.42 +0.2
2,183,897 - OHPLBJKB_02108 0.42 -1.0
2,184,011 - OHPLBJKB_02108 0.62 +2.0
2,184,017 - OHPLBJKB_02108 0.63 -1.5
2,184,017 - OHPLBJKB_02108 0.63 +0.4
2,184,017 - OHPLBJKB_02108 0.63 -0.0
2,184,216 + -0.1
2,184,259 - -0.5
2,184,259 - +0.5
2,184,282 + -1.7
2,184,283 - +1.6
2,184,283 - +0.4
2,184,351 + -0.6
2,184,351 + -0.3
2,184,351 + -0.2
2,184,351 + -0.3
2,184,351 + -0.2
2,184,351 + +0.8
2,184,352 - +1.2
2,184,352 - +0.2
2,184,352 - -0.6
2,184,352 - -1.0

Or see this region's nucleotide sequence