Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02037 and OHPLBJKB_02038 overlap by 4 nucleotides OHPLBJKB_02038 and OHPLBJKB_02039 are separated by 99 nucleotides OHPLBJKB_02039 and OHPLBJKB_02040 are separated by 547 nucleotides OHPLBJKB_02040 and OHPLBJKB_02041 are separated by 8 nucleotides
OHPLBJKB_02037: OHPLBJKB_02037 - hypothetical protein, at 2,111,935 to 2,114,991
_02037
OHPLBJKB_02038: OHPLBJKB_02038 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, at 2,114,988 to 2,115,398
_02038
OHPLBJKB_02039: OHPLBJKB_02039 - hypothetical protein, at 2,115,498 to 2,115,686
_02039
OHPLBJKB_02040: OHPLBJKB_02040 - Protein SufA, at 2,116,234 to 2,116,602
_02040
OHPLBJKB_02041: OHPLBJKB_02041 - FeS cluster assembly protein SufB, at 2,116,611 to 2,118,098
_02041
Position (kb)
2115
2116 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2114.541 kb on - strand, within OHPLBJKB_02037 at 2114.541 kb on - strand, within OHPLBJKB_02037 at 2114.560 kb on + strand, within OHPLBJKB_02037 at 2114.560 kb on + strand, within OHPLBJKB_02037 at 2114.561 kb on - strand, within OHPLBJKB_02037 at 2114.561 kb on - strand, within OHPLBJKB_02037 at 2114.562 kb on + strand, within OHPLBJKB_02037 at 2114.562 kb on + strand, within OHPLBJKB_02037 at 2114.563 kb on - strand, within OHPLBJKB_02037 at 2114.595 kb on + strand, within OHPLBJKB_02037 at 2114.804 kb on - strand at 2114.845 kb on + strand at 2114.852 kb on + strand at 2114.853 kb on - strand at 2114.868 kb on + strand at 2114.983 kb on - strand at 2114.985 kb on + strand at 2114.986 kb on - strand at 2114.986 kb on - strand at 2115.029 kb on + strand, within OHPLBJKB_02038 at 2115.077 kb on + strand, within OHPLBJKB_02038 at 2115.077 kb on + strand, within OHPLBJKB_02038 at 2115.202 kb on + strand, within OHPLBJKB_02038 at 2115.202 kb on + strand, within OHPLBJKB_02038 at 2115.202 kb on + strand, within OHPLBJKB_02038 at 2115.202 kb on + strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.203 kb on - strand, within OHPLBJKB_02038 at 2115.425 kb on + strand at 2115.462 kb on + strand at 2115.462 kb on + strand at 2115.465 kb on - strand at 2115.465 kb on - strand at 2115.465 kb on - strand at 2115.483 kb on - strand at 2115.497 kb on + strand at 2115.497 kb on + strand at 2115.497 kb on + strand at 2115.497 kb on + strand at 2115.497 kb on + strand at 2115.497 kb on + strand at 2115.497 kb on + strand at 2115.497 kb on + strand at 2115.498 kb on - strand at 2115.498 kb on - strand at 2115.498 kb on - strand at 2115.498 kb on - strand at 2115.498 kb on - strand at 2115.599 kb on - strand, within OHPLBJKB_02039 at 2115.599 kb on - strand, within OHPLBJKB_02039 at 2115.599 kb on - strand, within OHPLBJKB_02039 at 2115.623 kb on + strand, within OHPLBJKB_02039 at 2115.623 kb on + strand, within OHPLBJKB_02039 at 2115.623 kb on + strand, within OHPLBJKB_02039 at 2115.643 kb on + strand, within OHPLBJKB_02039 at 2115.643 kb on + strand, within OHPLBJKB_02039 at 2115.644 kb on - strand, within OHPLBJKB_02039 at 2115.696 kb on - strand at 2115.759 kb on + strand at 2115.767 kb on - strand at 2115.799 kb on + strand at 2115.843 kb on - strand at 2115.867 kb on - strand at 2115.867 kb on - strand at 2115.906 kb on - strand at 2115.915 kb on + strand at 2115.975 kb on + strand at 2115.975 kb on + strand at 2115.975 kb on + strand at 2116.066 kb on + strand at 2116.066 kb on + strand at 2116.108 kb on + strand at 2116.108 kb on + strand at 2116.109 kb on - strand at 2116.118 kb on - strand at 2116.118 kb on - strand at 2116.118 kb on - strand at 2116.118 kb on - strand at 2116.201 kb on + strand at 2116.201 kb on + strand at 2116.201 kb on + strand at 2116.202 kb on - strand at 2116.203 kb on + strand at 2116.203 kb on + strand at 2116.203 kb on + strand at 2116.203 kb on + strand at 2116.204 kb on - strand at 2116.287 kb on - strand, within OHPLBJKB_02040 at 2116.311 kb on - strand, within OHPLBJKB_02040 at 2116.345 kb on - strand, within OHPLBJKB_02040 at 2116.345 kb on - strand, within OHPLBJKB_02040 at 2116.530 kb on + strand, within OHPLBJKB_02040 at 2116.557 kb on + strand, within OHPLBJKB_02040 at 2116.558 kb on - strand, within OHPLBJKB_02040 at 2116.600 kb on + strand at 2116.600 kb on + strand at 2116.601 kb on - strand at 2116.610 kb on + strand at 2116.610 kb on + strand at 2116.610 kb on + strand at 2116.610 kb on + strand at 2116.610 kb on + strand at 2116.610 kb on + strand at 2116.611 kb on - strand at 2116.611 kb on - strand at 2116.611 kb on - strand at 2116.622 kb on + strand at 2116.671 kb on + strand at 2116.671 kb on + strand at 2116.672 kb on - strand at 2116.673 kb on + strand at 2116.674 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,114,541 - OHPLBJKB_02037 0.85 +0.1 2,114,541 - OHPLBJKB_02037 0.85 +0.3 2,114,560 + OHPLBJKB_02037 0.86 +1.0 2,114,560 + OHPLBJKB_02037 0.86 -0.5 2,114,561 - OHPLBJKB_02037 0.86 -1.7 2,114,561 - OHPLBJKB_02037 0.86 -0.3 2,114,562 + OHPLBJKB_02037 0.86 +0.4 2,114,562 + OHPLBJKB_02037 0.86 -0.1 2,114,563 - OHPLBJKB_02037 0.86 +1.7 2,114,595 + OHPLBJKB_02037 0.87 -0.6 2,114,804 - +0.2 2,114,845 + -1.1 2,114,852 + -0.9 2,114,853 - +0.6 2,114,868 + -1.0 2,114,983 - -0.8 2,114,985 + -0.2 2,114,986 - +1.3 2,114,986 - -1.6 2,115,029 + OHPLBJKB_02038 0.10 -0.3 2,115,077 + OHPLBJKB_02038 0.22 +1.6 2,115,077 + OHPLBJKB_02038 0.22 +1.5 2,115,202 + OHPLBJKB_02038 0.52 -3.0 2,115,202 + OHPLBJKB_02038 0.52 -0.7 2,115,202 + OHPLBJKB_02038 0.52 -0.3 2,115,202 + OHPLBJKB_02038 0.52 -1.1 2,115,203 - OHPLBJKB_02038 0.52 -0.3 2,115,203 - OHPLBJKB_02038 0.52 -0.1 2,115,203 - OHPLBJKB_02038 0.52 +0.1 2,115,203 - OHPLBJKB_02038 0.52 +1.0 2,115,203 - OHPLBJKB_02038 0.52 +1.3 2,115,203 - OHPLBJKB_02038 0.52 +0.4 2,115,203 - OHPLBJKB_02038 0.52 -0.2 2,115,203 - OHPLBJKB_02038 0.52 +0.9 2,115,203 - OHPLBJKB_02038 0.52 -1.6 2,115,425 + +0.6 2,115,462 + +0.9 2,115,462 + +0.2 2,115,465 - +1.0 2,115,465 - +1.4 2,115,465 - +0.2 2,115,483 - +1.6 2,115,497 + +1.8 2,115,497 + -0.3 2,115,497 + -1.7 2,115,497 + -1.5 2,115,497 + -1.2 2,115,497 + -0.4 2,115,497 + -0.7 2,115,497 + -0.8 2,115,498 - -0.8 2,115,498 - -0.6 2,115,498 - -1.0 2,115,498 - -1.0 2,115,498 - -1.1 2,115,599 - OHPLBJKB_02039 0.53 +0.7 2,115,599 - OHPLBJKB_02039 0.53 +0.5 2,115,599 - OHPLBJKB_02039 0.53 -0.1 2,115,623 + OHPLBJKB_02039 0.66 -0.8 2,115,623 + OHPLBJKB_02039 0.66 -1.1 2,115,623 + OHPLBJKB_02039 0.66 +0.1 2,115,643 + OHPLBJKB_02039 0.77 -0.2 2,115,643 + OHPLBJKB_02039 0.77 -1.3 2,115,644 - OHPLBJKB_02039 0.77 +0.7 2,115,696 - +1.6 2,115,759 + +0.1 2,115,767 - +0.4 2,115,799 + -0.1 2,115,843 - -0.5 2,115,867 - -0.2 2,115,867 - +0.5 2,115,906 - -1.4 2,115,915 + -0.0 2,115,975 + +0.3 2,115,975 + +0.0 2,115,975 + +0.7 2,116,066 + -0.6 2,116,066 + +0.6 2,116,108 + -0.9 2,116,108 + -0.2 2,116,109 - +0.6 2,116,118 - +0.0 2,116,118 - +0.2 2,116,118 - +1.0 2,116,118 - -0.8 2,116,201 + -0.2 2,116,201 + +0.4 2,116,201 + +0.8 2,116,202 - +0.8 2,116,203 + +1.5 2,116,203 + +0.4 2,116,203 + +0.3 2,116,203 + +1.2 2,116,204 - +0.5 2,116,287 - OHPLBJKB_02040 0.14 +2.0 2,116,311 - OHPLBJKB_02040 0.21 +0.9 2,116,345 - OHPLBJKB_02040 0.30 -0.4 2,116,345 - OHPLBJKB_02040 0.30 +0.4 2,116,530 + OHPLBJKB_02040 0.80 +2.4 2,116,557 + OHPLBJKB_02040 0.88 +0.2 2,116,558 - OHPLBJKB_02040 0.88 -1.1 2,116,600 + +0.7 2,116,600 + -0.3 2,116,601 - +0.1 2,116,610 + -0.1 2,116,610 + -1.2 2,116,610 + +0.4 2,116,610 + -0.8 2,116,610 + +0.3 2,116,610 + +0.3 2,116,611 - +0.6 2,116,611 - +1.0 2,116,611 - -0.0 2,116,622 + +0.7 2,116,671 + -0.6 2,116,671 + +0.2 2,116,672 - -0.5 2,116,673 + +1.1 2,116,674 - +0.9
Or see this region's nucleotide sequence