Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00208 and OHPLBJKB_00209 are separated by 390 nucleotides OHPLBJKB_00209 and OHPLBJKB_00210 are separated by 244 nucleotides OHPLBJKB_00210 and OHPLBJKB_00211 are separated by 231 nucleotides
OHPLBJKB_00208: OHPLBJKB_00208 - Universal stress protein A, at 227,846 to 228,280
_00208
OHPLBJKB_00209: OHPLBJKB_00209 - Universal stress protein B, at 228,671 to 229,006
_00209
OHPLBJKB_00210: OHPLBJKB_00210 - Low-affinity inorganic phosphate transporter 1, at 229,251 to 230,750
_00210
OHPLBJKB_00211: OHPLBJKB_00211 - hypothetical protein, at 230,982 to 232,184
_00211
Position (kb) 229
230
231 Strain fitness (log2 ratio) -2
-1
0
1 at 228.271 kb on + strand at 228.271 kb on + strand at 228.272 kb on - strand at 228.273 kb on + strand at 228.274 kb on - strand at 228.274 kb on - strand at 228.280 kb on + strand at 228.286 kb on + strand at 228.298 kb on - strand at 228.339 kb on + strand at 228.362 kb on + strand at 228.362 kb on + strand at 228.362 kb on + strand at 228.362 kb on + strand at 228.362 kb on + strand at 228.363 kb on - strand at 228.402 kb on - strand at 228.402 kb on - strand at 228.413 kb on + strand at 228.413 kb on + strand at 228.414 kb on - strand at 228.414 kb on - strand at 228.414 kb on - strand at 228.420 kb on + strand at 228.421 kb on - strand at 228.455 kb on - strand at 228.462 kb on - strand at 228.466 kb on - strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.486 kb on + strand at 228.487 kb on - strand at 228.487 kb on - strand at 228.487 kb on - strand at 228.488 kb on + strand at 228.488 kb on + strand at 228.488 kb on + strand at 228.489 kb on - strand at 228.495 kb on - strand at 228.533 kb on + strand at 228.533 kb on + strand at 228.533 kb on + strand at 228.534 kb on - strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.538 kb on + strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.539 kb on - strand at 228.542 kb on + strand at 228.542 kb on + strand at 228.542 kb on + strand at 228.542 kb on + strand at 228.542 kb on + strand at 228.542 kb on + strand at 228.542 kb on + strand at 228.543 kb on - strand at 228.543 kb on - strand at 228.543 kb on - strand at 228.543 kb on - strand at 228.598 kb on + strand at 228.670 kb on + strand at 228.670 kb on + strand at 228.670 kb on + strand at 228.670 kb on + strand at 228.671 kb on - strand at 228.671 kb on - strand at 228.671 kb on - strand at 228.671 kb on - strand at 228.671 kb on - strand at 228.671 kb on - strand at 228.671 kb on - strand at 228.671 kb on - strand at 228.690 kb on + strand at 228.691 kb on - strand at 228.702 kb on + strand at 228.702 kb on + strand at 228.734 kb on + strand, within OHPLBJKB_00209 at 228.766 kb on - strand, within OHPLBJKB_00209 at 228.766 kb on - strand, within OHPLBJKB_00209 at 228.791 kb on + strand, within OHPLBJKB_00209 at 228.792 kb on - strand, within OHPLBJKB_00209 at 228.797 kb on + strand, within OHPLBJKB_00209 at 228.797 kb on + strand, within OHPLBJKB_00209 at 228.797 kb on + strand, within OHPLBJKB_00209 at 228.797 kb on + strand, within OHPLBJKB_00209 at 228.797 kb on + strand, within OHPLBJKB_00209 at 228.798 kb on - strand, within OHPLBJKB_00209 at 228.798 kb on - strand, within OHPLBJKB_00209 at 228.864 kb on - strand, within OHPLBJKB_00209 at 228.864 kb on - strand, within OHPLBJKB_00209 at 228.864 kb on - strand, within OHPLBJKB_00209 at 228.864 kb on - strand, within OHPLBJKB_00209 at 228.864 kb on - strand, within OHPLBJKB_00209 at 228.865 kb on + strand, within OHPLBJKB_00209 at 228.865 kb on + strand, within OHPLBJKB_00209 at 228.865 kb on + strand, within OHPLBJKB_00209 at 228.865 kb on + strand, within OHPLBJKB_00209 at 228.865 kb on + strand, within OHPLBJKB_00209 at 228.866 kb on - strand, within OHPLBJKB_00209 at 228.866 kb on - strand, within OHPLBJKB_00209 at 228.866 kb on - strand, within OHPLBJKB_00209 at 228.866 kb on - strand, within OHPLBJKB_00209 at 228.866 kb on - strand, within OHPLBJKB_00209 at 228.866 kb on - strand, within OHPLBJKB_00209 at 228.869 kb on + strand, within OHPLBJKB_00209 at 228.869 kb on + strand, within OHPLBJKB_00209 at 228.869 kb on + strand, within OHPLBJKB_00209 at 228.869 kb on + strand, within OHPLBJKB_00209 at 228.869 kb on + strand, within OHPLBJKB_00209 at 228.869 kb on + strand, within OHPLBJKB_00209 at 228.869 kb on + strand, within OHPLBJKB_00209 at 228.869 kb on + strand, within OHPLBJKB_00209 at 228.870 kb on - strand, within OHPLBJKB_00209 at 228.870 kb on - strand, within OHPLBJKB_00209 at 228.870 kb on - strand, within OHPLBJKB_00209 at 228.870 kb on - strand, within OHPLBJKB_00209 at 228.870 kb on - strand, within OHPLBJKB_00209 at 228.870 kb on - strand, within OHPLBJKB_00209 at 228.870 kb on - strand, within OHPLBJKB_00209 at 228.870 kb on - strand, within OHPLBJKB_00209 at 228.941 kb on - strand, within OHPLBJKB_00209 at 228.941 kb on - strand, within OHPLBJKB_00209 at 229.004 kb on + strand at 229.020 kb on - strand at 229.027 kb on + strand at 229.027 kb on + strand at 229.027 kb on + strand at 229.028 kb on - strand at 229.028 kb on - strand at 229.028 kb on - strand at 229.029 kb on + strand at 229.071 kb on - strand at 229.111 kb on + strand at 229.115 kb on + strand at 229.198 kb on + strand at 229.198 kb on + strand at 229.246 kb on + strand at 229.246 kb on + strand at 229.314 kb on - strand at 229.334 kb on + strand at 229.356 kb on + strand at 229.371 kb on + strand at 229.372 kb on - strand at 229.404 kb on + strand, within OHPLBJKB_00210 at 229.405 kb on - strand, within OHPLBJKB_00210 at 229.405 kb on - strand, within OHPLBJKB_00210 at 229.413 kb on - strand, within OHPLBJKB_00210 at 229.435 kb on + strand, within OHPLBJKB_00210 at 229.435 kb on + strand, within OHPLBJKB_00210 at 229.435 kb on + strand, within OHPLBJKB_00210 at 229.436 kb on - strand, within OHPLBJKB_00210 at 229.436 kb on - strand, within OHPLBJKB_00210 at 229.436 kb on - strand, within OHPLBJKB_00210 at 229.492 kb on + strand, within OHPLBJKB_00210 at 229.493 kb on - strand, within OHPLBJKB_00210 at 229.610 kb on - strand, within OHPLBJKB_00210 at 229.622 kb on + strand, within OHPLBJKB_00210 at 229.721 kb on + strand, within OHPLBJKB_00210 at 229.722 kb on - strand, within OHPLBJKB_00210 at 229.722 kb on - strand, within OHPLBJKB_00210 at 229.740 kb on - strand, within OHPLBJKB_00210 at 229.881 kb on + strand, within OHPLBJKB_00210 at 229.881 kb on + strand, within OHPLBJKB_00210 at 229.934 kb on - strand, within OHPLBJKB_00210 at 229.994 kb on + strand, within OHPLBJKB_00210 at 230.040 kb on - strand, within OHPLBJKB_00210 at 230.040 kb on - strand, within OHPLBJKB_00210 at 230.385 kb on - strand, within OHPLBJKB_00210 at 230.403 kb on + strand, within OHPLBJKB_00210 at 230.414 kb on - strand, within OHPLBJKB_00210 at 230.414 kb on - strand, within OHPLBJKB_00210 at 230.454 kb on - strand, within OHPLBJKB_00210 at 230.454 kb on - strand, within OHPLBJKB_00210 at 230.454 kb on - strand, within OHPLBJKB_00210 at 230.492 kb on + strand, within OHPLBJKB_00210 at 230.620 kb on + strand at 230.620 kb on + strand at 230.620 kb on + strand at 230.620 kb on + strand at 230.621 kb on - strand at 230.621 kb on - strand at 230.706 kb on + strand at 230.707 kb on - strand at 230.745 kb on + strand at 230.745 kb on + strand at 230.745 kb on + strand at 230.745 kb on + strand at 230.745 kb on + strand at 230.746 kb on - strand at 230.746 kb on - strand at 230.750 kb on + strand at 230.751 kb on - strand at 230.791 kb on - strand at 230.825 kb on - strand at 230.884 kb on + strand at 230.967 kb on + strand at 231.002 kb on + strand at 231.005 kb on + strand at 231.006 kb on - strand at 231.110 kb on + strand, within OHPLBJKB_00211 at 231.110 kb on + strand, within OHPLBJKB_00211 at 231.111 kb on - strand, within OHPLBJKB_00211 at 231.147 kb on + strand, within OHPLBJKB_00211 at 231.147 kb on + strand, within OHPLBJKB_00211 at 231.147 kb on + strand, within OHPLBJKB_00211 at 231.148 kb on - strand, within OHPLBJKB_00211 at 231.166 kb on - strand, within OHPLBJKB_00211 at 231.166 kb on - strand, within OHPLBJKB_00211 at 231.212 kb on + strand, within OHPLBJKB_00211 at 231.349 kb on + strand, within OHPLBJKB_00211 at 231.349 kb on + strand, within OHPLBJKB_00211 at 231.349 kb on + strand, within OHPLBJKB_00211 at 231.349 kb on + strand, within OHPLBJKB_00211 at 231.349 kb on + strand, within OHPLBJKB_00211 at 231.349 kb on + strand, within OHPLBJKB_00211 at 231.350 kb on - strand, within OHPLBJKB_00211 at 231.350 kb on - strand, within OHPLBJKB_00211 at 231.350 kb on - strand, within OHPLBJKB_00211 at 231.501 kb on + strand, within OHPLBJKB_00211 at 231.503 kb on + strand, within OHPLBJKB_00211 at 231.504 kb on - strand, within OHPLBJKB_00211 at 231.504 kb on - strand, within OHPLBJKB_00211 at 231.572 kb on + strand, within OHPLBJKB_00211 at 231.572 kb on + strand, within OHPLBJKB_00211 at 231.573 kb on - strand, within OHPLBJKB_00211 at 231.573 kb on - strand, within OHPLBJKB_00211 at 231.592 kb on + strand, within OHPLBJKB_00211 at 231.593 kb on - strand, within OHPLBJKB_00211 at 231.664 kb on + strand, within OHPLBJKB_00211 at 231.665 kb on - strand, within OHPLBJKB_00211 at 231.665 kb on - strand, within OHPLBJKB_00211 at 231.743 kb on + strand, within OHPLBJKB_00211
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 228,271 + -0.7 228,271 + +0.9 228,272 - +0.2 228,273 + +0.6 228,274 - +0.2 228,274 - -0.3 228,280 + -0.0 228,286 + +0.3 228,298 - -0.5 228,339 + -0.2 228,362 + -0.1 228,362 + +0.6 228,362 + -0.2 228,362 + -0.2 228,362 + -0.4 228,363 - +0.3 228,402 - +1.1 228,402 - -0.0 228,413 + +0.2 228,413 + +0.7 228,414 - +0.1 228,414 - +0.4 228,414 - -1.7 228,420 + +0.5 228,421 - -0.3 228,455 - -0.5 228,462 - -0.9 228,466 - -1.4 228,486 + +0.2 228,486 + +0.3 228,486 + +1.0 228,486 + -0.2 228,486 + -0.7 228,486 + -0.2 228,486 + +0.9 228,486 + +0.2 228,486 + +1.6 228,486 + -0.6 228,486 + -0.6 228,486 + +0.7 228,486 + -1.4 228,487 - -0.5 228,487 - +1.7 228,487 - +0.4 228,488 + +0.9 228,488 + +0.2 228,488 + -1.0 228,489 - -0.7 228,495 - +0.4 228,533 + -0.2 228,533 + +1.4 228,533 + +0.6 228,534 - -1.2 228,538 + -0.2 228,538 + +0.6 228,538 + +0.1 228,538 + +0.8 228,538 + -0.7 228,538 + -0.2 228,538 + +0.3 228,538 + +0.3 228,538 + +0.1 228,538 + -0.4 228,538 + +1.3 228,538 + -0.3 228,538 + -0.2 228,538 + +0.6 228,539 - +0.8 228,539 - +0.6 228,539 - +0.3 228,539 - -0.3 228,539 - -0.2 228,539 - +1.1 228,539 - -0.1 228,539 - +0.8 228,539 - -0.7 228,539 - -0.2 228,542 + +1.3 228,542 + -0.2 228,542 + +0.7 228,542 + -0.4 228,542 + +0.9 228,542 + -0.5 228,542 + +1.6 228,543 - +0.8 228,543 - -0.0 228,543 - -0.6 228,543 - -1.8 228,598 + +1.0 228,670 + +0.4 228,670 + +0.4 228,670 + +1.7 228,670 + +0.9 228,671 - +0.1 228,671 - +0.3 228,671 - -0.2 228,671 - -0.5 228,671 - +0.1 228,671 - -0.8 228,671 - +0.0 228,671 - -0.8 228,690 + -0.3 228,691 - -0.4 228,702 + -0.1 228,702 + -0.1 228,734 + OHPLBJKB_00209 0.19 -0.1 228,766 - OHPLBJKB_00209 0.28 -1.1 228,766 - OHPLBJKB_00209 0.28 -0.9 228,791 + OHPLBJKB_00209 0.36 -0.3 228,792 - OHPLBJKB_00209 0.36 +0.4 228,797 + OHPLBJKB_00209 0.38 -1.0 228,797 + OHPLBJKB_00209 0.38 +0.6 228,797 + OHPLBJKB_00209 0.38 +0.0 228,797 + OHPLBJKB_00209 0.38 +0.3 228,797 + OHPLBJKB_00209 0.38 +0.1 228,798 - OHPLBJKB_00209 0.38 +0.4 228,798 - OHPLBJKB_00209 0.38 -0.1 228,864 - OHPLBJKB_00209 0.57 -0.7 228,864 - OHPLBJKB_00209 0.57 -0.4 228,864 - OHPLBJKB_00209 0.57 -0.2 228,864 - OHPLBJKB_00209 0.57 +1.1 228,864 - OHPLBJKB_00209 0.57 -0.1 228,865 + OHPLBJKB_00209 0.58 -1.4 228,865 + OHPLBJKB_00209 0.58 -0.2 228,865 + OHPLBJKB_00209 0.58 -0.5 228,865 + OHPLBJKB_00209 0.58 +0.1 228,865 + OHPLBJKB_00209 0.58 +0.2 228,866 - OHPLBJKB_00209 0.58 +0.3 228,866 - OHPLBJKB_00209 0.58 -0.1 228,866 - OHPLBJKB_00209 0.58 +0.0 228,866 - OHPLBJKB_00209 0.58 -0.8 228,866 - OHPLBJKB_00209 0.58 -0.6 228,866 - OHPLBJKB_00209 0.58 +0.0 228,869 + OHPLBJKB_00209 0.59 -0.1 228,869 + OHPLBJKB_00209 0.59 -0.2 228,869 + OHPLBJKB_00209 0.59 +0.9 228,869 + OHPLBJKB_00209 0.59 -0.3 228,869 + OHPLBJKB_00209 0.59 -0.8 228,869 + OHPLBJKB_00209 0.59 -0.1 228,869 + OHPLBJKB_00209 0.59 -0.1 228,869 + OHPLBJKB_00209 0.59 -0.1 228,870 - OHPLBJKB_00209 0.59 -0.3 228,870 - OHPLBJKB_00209 0.59 -0.1 228,870 - OHPLBJKB_00209 0.59 +1.0 228,870 - OHPLBJKB_00209 0.59 -1.3 228,870 - OHPLBJKB_00209 0.59 +0.7 228,870 - OHPLBJKB_00209 0.59 -0.3 228,870 - OHPLBJKB_00209 0.59 +0.7 228,870 - OHPLBJKB_00209 0.59 -0.7 228,941 - OHPLBJKB_00209 0.80 +0.2 228,941 - OHPLBJKB_00209 0.80 +0.4 229,004 + -1.6 229,020 - -0.9 229,027 + -0.4 229,027 + -0.4 229,027 + -0.7 229,028 - +0.6 229,028 - +0.3 229,028 - +1.5 229,029 + -0.2 229,071 - +0.9 229,111 + +0.6 229,115 + +0.7 229,198 + -0.6 229,198 + -0.7 229,246 + -0.9 229,246 + -0.1 229,314 - +1.3 229,334 + -0.3 229,356 + +0.3 229,371 + -0.6 229,372 - +0.7 229,404 + OHPLBJKB_00210 0.10 -0.1 229,405 - OHPLBJKB_00210 0.10 -0.1 229,405 - OHPLBJKB_00210 0.10 -1.2 229,413 - OHPLBJKB_00210 0.11 +0.7 229,435 + OHPLBJKB_00210 0.12 -0.1 229,435 + OHPLBJKB_00210 0.12 -1.3 229,435 + OHPLBJKB_00210 0.12 +0.3 229,436 - OHPLBJKB_00210 0.12 -1.2 229,436 - OHPLBJKB_00210 0.12 -0.2 229,436 - OHPLBJKB_00210 0.12 -0.9 229,492 + OHPLBJKB_00210 0.16 -0.3 229,493 - OHPLBJKB_00210 0.16 -0.7 229,610 - OHPLBJKB_00210 0.24 +0.3 229,622 + OHPLBJKB_00210 0.25 +0.4 229,721 + OHPLBJKB_00210 0.31 +0.3 229,722 - OHPLBJKB_00210 0.31 +0.7 229,722 - OHPLBJKB_00210 0.31 +0.3 229,740 - OHPLBJKB_00210 0.33 +0.7 229,881 + OHPLBJKB_00210 0.42 +0.7 229,881 + OHPLBJKB_00210 0.42 -0.3 229,934 - OHPLBJKB_00210 0.46 +0.7 229,994 + OHPLBJKB_00210 0.50 -0.1 230,040 - OHPLBJKB_00210 0.53 -0.1 230,040 - OHPLBJKB_00210 0.53 -1.8 230,385 - OHPLBJKB_00210 0.76 -0.1 230,403 + OHPLBJKB_00210 0.77 +0.3 230,414 - OHPLBJKB_00210 0.78 -0.1 230,414 - OHPLBJKB_00210 0.78 -0.9 230,454 - OHPLBJKB_00210 0.80 -1.2 230,454 - OHPLBJKB_00210 0.80 -2.3 230,454 - OHPLBJKB_00210 0.80 +0.7 230,492 + OHPLBJKB_00210 0.83 -0.3 230,620 + -0.7 230,620 + +0.7 230,620 + +0.9 230,620 + +0.1 230,621 - -0.9 230,621 - -0.3 230,706 + +0.1 230,707 - -1.1 230,745 + +0.7 230,745 + -0.1 230,745 + +0.9 230,745 + +0.7 230,745 + -0.6 230,746 - -0.1 230,746 - +0.1 230,750 + -0.3 230,751 - -0.1 230,791 - -0.8 230,825 - -1.4 230,884 + -0.9 230,967 + -0.3 231,002 + -1.0 231,005 + -0.3 231,006 - +0.0 231,110 + OHPLBJKB_00211 0.11 -0.5 231,110 + OHPLBJKB_00211 0.11 +0.5 231,111 - OHPLBJKB_00211 0.11 -0.1 231,147 + OHPLBJKB_00211 0.14 +0.2 231,147 + OHPLBJKB_00211 0.14 +0.7 231,147 + OHPLBJKB_00211 0.14 -0.7 231,148 - OHPLBJKB_00211 0.14 +0.1 231,166 - OHPLBJKB_00211 0.15 +0.7 231,166 - OHPLBJKB_00211 0.15 +0.2 231,212 + OHPLBJKB_00211 0.19 -1.2 231,349 + OHPLBJKB_00211 0.31 +0.9 231,349 + OHPLBJKB_00211 0.31 +0.4 231,349 + OHPLBJKB_00211 0.31 +0.7 231,349 + OHPLBJKB_00211 0.31 -0.2 231,349 + OHPLBJKB_00211 0.31 +0.7 231,349 + OHPLBJKB_00211 0.31 +0.4 231,350 - OHPLBJKB_00211 0.31 -1.3 231,350 - OHPLBJKB_00211 0.31 -0.9 231,350 - OHPLBJKB_00211 0.31 -0.3 231,501 + OHPLBJKB_00211 0.43 +0.7 231,503 + OHPLBJKB_00211 0.43 -0.4 231,504 - OHPLBJKB_00211 0.43 -1.1 231,504 - OHPLBJKB_00211 0.43 -1.5 231,572 + OHPLBJKB_00211 0.49 -0.7 231,572 + OHPLBJKB_00211 0.49 -1.8 231,573 - OHPLBJKB_00211 0.49 -0.8 231,573 - OHPLBJKB_00211 0.49 +0.1 231,592 + OHPLBJKB_00211 0.51 +0.1 231,593 - OHPLBJKB_00211 0.51 +0.3 231,664 + OHPLBJKB_00211 0.57 -0.2 231,665 - OHPLBJKB_00211 0.57 +0.5 231,665 - OHPLBJKB_00211 0.57 -0.2 231,743 + OHPLBJKB_00211 0.63 +0.0
Or see this region's nucleotide sequence