Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02511

Experiment: lib only

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02509 and OHPLBJKB_02510 are separated by 206 nucleotidesOHPLBJKB_02510 and OHPLBJKB_02511 are separated by 91 nucleotidesOHPLBJKB_02511 and OHPLBJKB_02512 are separated by 71 nucleotidesOHPLBJKB_02512 and OHPLBJKB_02513 are separated by 241 nucleotides OHPLBJKB_02509: OHPLBJKB_02509 - Hemolysin E, chromosomal, at 2,624,452 to 2,624,712 _02509 OHPLBJKB_02510: OHPLBJKB_02510 - hypothetical protein, at 2,624,919 to 2,625,365 _02510 OHPLBJKB_02511: OHPLBJKB_02511 - putative protein YcgM, at 2,625,457 to 2,626,116 _02511 OHPLBJKB_02512: OHPLBJKB_02512 - Protein YcgL, at 2,626,188 to 2,626,481 _02512 OHPLBJKB_02513: OHPLBJKB_02513 - Inhibitor of g-type lysozyme, at 2,626,723 to 2,627,124 _02513 Position (kb) 2625 2626 2627Strain fitness (log2 ratio) -2 -1 0 1at 2624.596 kb on + strand, within OHPLBJKB_02509at 2624.734 kb on + strandat 2624.745 kb on + strandat 2624.830 kb on - strandat 2624.882 kb on - strandat 2624.944 kb on - strandat 2624.944 kb on - strandat 2625.006 kb on - strand, within OHPLBJKB_02510at 2625.061 kb on - strand, within OHPLBJKB_02510at 2625.143 kb on + strand, within OHPLBJKB_02510at 2625.143 kb on + strand, within OHPLBJKB_02510at 2625.144 kb on - strand, within OHPLBJKB_02510at 2625.179 kb on - strand, within OHPLBJKB_02510at 2625.203 kb on + strand, within OHPLBJKB_02510at 2625.235 kb on + strand, within OHPLBJKB_02510at 2625.339 kb on - strandat 2625.354 kb on + strandat 2625.382 kb on - strandat 2625.386 kb on + strandat 2625.398 kb on + strandat 2625.398 kb on + strandat 2625.398 kb on + strandat 2625.398 kb on + strandat 2625.398 kb on + strandat 2625.398 kb on + strandat 2625.399 kb on - strandat 2625.399 kb on - strandat 2625.399 kb on - strandat 2625.400 kb on + strandat 2625.455 kb on + strandat 2625.591 kb on + strand, within OHPLBJKB_02511at 2625.591 kb on + strand, within OHPLBJKB_02511at 2625.591 kb on + strand, within OHPLBJKB_02511at 2625.591 kb on + strand, within OHPLBJKB_02511at 2625.591 kb on + strand, within OHPLBJKB_02511at 2625.591 kb on + strand, within OHPLBJKB_02511at 2625.592 kb on - strand, within OHPLBJKB_02511at 2625.593 kb on + strand, within OHPLBJKB_02511at 2625.593 kb on + strand, within OHPLBJKB_02511at 2625.594 kb on - strand, within OHPLBJKB_02511at 2625.594 kb on - strand, within OHPLBJKB_02511at 2625.616 kb on - strand, within OHPLBJKB_02511at 2625.637 kb on - strand, within OHPLBJKB_02511at 2625.681 kb on + strand, within OHPLBJKB_02511at 2625.682 kb on - strand, within OHPLBJKB_02511at 2625.741 kb on + strand, within OHPLBJKB_02511at 2625.754 kb on - strand, within OHPLBJKB_02511at 2625.984 kb on + strand, within OHPLBJKB_02511at 2625.984 kb on + strand, within OHPLBJKB_02511at 2626.029 kb on + strand, within OHPLBJKB_02511at 2626.029 kb on + strand, within OHPLBJKB_02511at 2626.029 kb on + strand, within OHPLBJKB_02511at 2626.040 kb on + strand, within OHPLBJKB_02511at 2626.040 kb on + strand, within OHPLBJKB_02511at 2626.041 kb on - strand, within OHPLBJKB_02511at 2626.061 kb on - strandat 2626.061 kb on - strandat 2626.061 kb on - strandat 2626.066 kb on - strandat 2626.112 kb on + strandat 2626.112 kb on + strandat 2626.112 kb on + strandat 2626.112 kb on + strandat 2626.113 kb on - strandat 2626.113 kb on - strandat 2626.113 kb on - strandat 2626.113 kb on - strandat 2626.113 kb on - strandat 2626.116 kb on + strandat 2626.116 kb on + strandat 2626.116 kb on + strandat 2626.117 kb on - strandat 2626.117 kb on - strandat 2626.167 kb on - strandat 2626.167 kb on - strandat 2626.167 kb on - strandat 2626.189 kb on + strandat 2626.190 kb on - strandat 2626.190 kb on - strandat 2626.196 kb on + strandat 2626.273 kb on + strand, within OHPLBJKB_02512at 2626.274 kb on - strand, within OHPLBJKB_02512at 2626.274 kb on - strand, within OHPLBJKB_02512at 2626.274 kb on - strand, within OHPLBJKB_02512at 2626.277 kb on - strand, within OHPLBJKB_02512at 2626.432 kb on + strand, within OHPLBJKB_02512at 2626.433 kb on - strand, within OHPLBJKB_02512at 2626.434 kb on + strand, within OHPLBJKB_02512at 2626.435 kb on - strand, within OHPLBJKB_02512at 2626.435 kb on - strand, within OHPLBJKB_02512at 2626.435 kb on - strand, within OHPLBJKB_02512at 2626.435 kb on - strand, within OHPLBJKB_02512at 2626.435 kb on - strand, within OHPLBJKB_02512at 2626.435 kb on - strand, within OHPLBJKB_02512at 2626.438 kb on + strand, within OHPLBJKB_02512at 2626.438 kb on + strand, within OHPLBJKB_02512at 2626.466 kb on - strandat 2626.494 kb on + strandat 2626.519 kb on + strandat 2626.519 kb on + strandat 2626.519 kb on + strandat 2626.520 kb on - strandat 2626.591 kb on + strandat 2626.591 kb on + strandat 2626.591 kb on + strandat 2626.591 kb on + strandat 2626.592 kb on - strandat 2626.593 kb on + strandat 2626.593 kb on + strandat 2626.593 kb on + strandat 2626.594 kb on - strandat 2626.594 kb on - strandat 2626.594 kb on - strandat 2626.594 kb on - strandat 2626.594 kb on - strandat 2626.594 kb on - strandat 2626.598 kb on - strandat 2626.678 kb on - strandat 2626.680 kb on - strandat 2626.683 kb on - strandat 2626.718 kb on + strandat 2626.828 kb on - strand, within OHPLBJKB_02513at 2626.872 kb on + strand, within OHPLBJKB_02513at 2626.872 kb on + strand, within OHPLBJKB_02513at 2626.872 kb on + strand, within OHPLBJKB_02513at 2626.873 kb on - strand, within OHPLBJKB_02513at 2626.873 kb on - strand, within OHPLBJKB_02513at 2626.876 kb on + strand, within OHPLBJKB_02513at 2626.876 kb on + strand, within OHPLBJKB_02513at 2626.877 kb on - strand, within OHPLBJKB_02513at 2626.877 kb on - strand, within OHPLBJKB_02513at 2626.877 kb on - strand, within OHPLBJKB_02513at 2626.877 kb on - strand, within OHPLBJKB_02513at 2626.877 kb on - strand, within OHPLBJKB_02513at 2626.877 kb on - strand, within OHPLBJKB_02513at 2626.877 kb on - strand, within OHPLBJKB_02513at 2626.878 kb on + strand, within OHPLBJKB_02513at 2626.878 kb on + strand, within OHPLBJKB_02513at 2626.879 kb on - strand, within OHPLBJKB_02513at 2626.879 kb on - strand, within OHPLBJKB_02513at 2626.879 kb on - strand, within OHPLBJKB_02513at 2626.879 kb on - strand, within OHPLBJKB_02513at 2626.885 kb on + strand, within OHPLBJKB_02513at 2626.885 kb on + strand, within OHPLBJKB_02513at 2626.938 kb on + strand, within OHPLBJKB_02513at 2626.938 kb on + strand, within OHPLBJKB_02513at 2626.939 kb on - strand, within OHPLBJKB_02513at 2626.942 kb on + strand, within OHPLBJKB_02513at 2626.942 kb on + strand, within OHPLBJKB_02513at 2626.943 kb on - strand, within OHPLBJKB_02513at 2627.018 kb on - strand, within OHPLBJKB_02513

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Per-strain Table

Position Strand Gene LocusTag Fraction lib only
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2,624,596 + OHPLBJKB_02509 0.55 +0.1
2,624,734 + +1.1
2,624,745 + -1.2
2,624,830 - +0.1
2,624,882 - -0.2
2,624,944 - +0.2
2,624,944 - -0.9
2,625,006 - OHPLBJKB_02510 0.19 +1.3
2,625,061 - OHPLBJKB_02510 0.32 +0.4
2,625,143 + OHPLBJKB_02510 0.50 -0.6
2,625,143 + OHPLBJKB_02510 0.50 -0.0
2,625,144 - OHPLBJKB_02510 0.50 +0.2
2,625,179 - OHPLBJKB_02510 0.58 -1.0
2,625,203 + OHPLBJKB_02510 0.64 -2.2
2,625,235 + OHPLBJKB_02510 0.71 -0.9
2,625,339 - -0.8
2,625,354 + -2.0
2,625,382 - -0.6
2,625,386 + -1.1
2,625,398 + -0.1
2,625,398 + +0.6
2,625,398 + -2.0
2,625,398 + -1.3
2,625,398 + +0.7
2,625,398 + -1.5
2,625,399 - -0.1
2,625,399 - -0.9
2,625,399 - -0.2
2,625,400 + +0.7
2,625,455 + +0.3
2,625,591 + OHPLBJKB_02511 0.20 -0.1
2,625,591 + OHPLBJKB_02511 0.20 -1.3
2,625,591 + OHPLBJKB_02511 0.20 -0.7
2,625,591 + OHPLBJKB_02511 0.20 -1.8
2,625,591 + OHPLBJKB_02511 0.20 +0.5
2,625,591 + OHPLBJKB_02511 0.20 -0.3
2,625,592 - OHPLBJKB_02511 0.20 -0.5
2,625,593 + OHPLBJKB_02511 0.21 -0.3
2,625,593 + OHPLBJKB_02511 0.21 -0.0
2,625,594 - OHPLBJKB_02511 0.21 +0.3
2,625,594 - OHPLBJKB_02511 0.21 -1.5
2,625,616 - OHPLBJKB_02511 0.24 +0.4
2,625,637 - OHPLBJKB_02511 0.27 +0.2
2,625,681 + OHPLBJKB_02511 0.34 -1.8
2,625,682 - OHPLBJKB_02511 0.34 +0.4
2,625,741 + OHPLBJKB_02511 0.43 -0.9
2,625,754 - OHPLBJKB_02511 0.45 -1.2
2,625,984 + OHPLBJKB_02511 0.80 -0.3
2,625,984 + OHPLBJKB_02511 0.80 +0.2
2,626,029 + OHPLBJKB_02511 0.87 +1.0
2,626,029 + OHPLBJKB_02511 0.87 +1.7
2,626,029 + OHPLBJKB_02511 0.87 -0.3
2,626,040 + OHPLBJKB_02511 0.88 -1.5
2,626,040 + OHPLBJKB_02511 0.88 +0.5
2,626,041 - OHPLBJKB_02511 0.88 -0.8
2,626,061 - -0.5
2,626,061 - -0.6
2,626,061 - -0.6
2,626,066 - +0.4
2,626,112 + -0.3
2,626,112 + -0.9
2,626,112 + +0.5
2,626,112 + -1.2
2,626,113 - +0.4
2,626,113 - +0.4
2,626,113 - +0.9
2,626,113 - -1.1
2,626,113 - +0.3
2,626,116 + -0.1
2,626,116 + +0.3
2,626,116 + +1.5
2,626,117 - -0.3
2,626,117 - -0.2
2,626,167 - +1.4
2,626,167 - +0.3
2,626,167 - +1.0
2,626,189 + +1.6
2,626,190 - +0.2
2,626,190 - +0.1
2,626,196 + -0.6
2,626,273 + OHPLBJKB_02512 0.29 -0.8
2,626,274 - OHPLBJKB_02512 0.29 +0.8
2,626,274 - OHPLBJKB_02512 0.29 -1.5
2,626,274 - OHPLBJKB_02512 0.29 +0.1
2,626,277 - OHPLBJKB_02512 0.30 -0.1
2,626,432 + OHPLBJKB_02512 0.83 +0.7
2,626,433 - OHPLBJKB_02512 0.83 -0.2
2,626,434 + OHPLBJKB_02512 0.84 -0.1
2,626,435 - OHPLBJKB_02512 0.84 +0.1
2,626,435 - OHPLBJKB_02512 0.84 -0.8
2,626,435 - OHPLBJKB_02512 0.84 +0.4
2,626,435 - OHPLBJKB_02512 0.84 -0.3
2,626,435 - OHPLBJKB_02512 0.84 -0.2
2,626,435 - OHPLBJKB_02512 0.84 -0.7
2,626,438 + OHPLBJKB_02512 0.85 +0.5
2,626,438 + OHPLBJKB_02512 0.85 -0.9
2,626,466 - -0.6
2,626,494 + +1.6
2,626,519 + +1.0
2,626,519 + -0.6
2,626,519 + +0.4
2,626,520 - +0.8
2,626,591 + +0.9
2,626,591 + -0.1
2,626,591 + -0.1
2,626,591 + +0.0
2,626,592 - -0.8
2,626,593 + -0.9
2,626,593 + -0.3
2,626,593 + -0.2
2,626,594 - -0.5
2,626,594 - +0.0
2,626,594 - -0.6
2,626,594 - -0.7
2,626,594 - -0.7
2,626,594 - +1.0
2,626,598 - +0.7
2,626,678 - +0.1
2,626,680 - +0.3
2,626,683 - -0.7
2,626,718 + +0.3
2,626,828 - OHPLBJKB_02513 0.26 +0.9
2,626,872 + OHPLBJKB_02513 0.37 +0.2
2,626,872 + OHPLBJKB_02513 0.37 -0.0
2,626,872 + OHPLBJKB_02513 0.37 +0.9
2,626,873 - OHPLBJKB_02513 0.37 +0.7
2,626,873 - OHPLBJKB_02513 0.37 -0.1
2,626,876 + OHPLBJKB_02513 0.38 +0.7
2,626,876 + OHPLBJKB_02513 0.38 -0.2
2,626,877 - OHPLBJKB_02513 0.38 -0.7
2,626,877 - OHPLBJKB_02513 0.38 +0.7
2,626,877 - OHPLBJKB_02513 0.38 -0.2
2,626,877 - OHPLBJKB_02513 0.38 +0.5
2,626,877 - OHPLBJKB_02513 0.38 +0.3
2,626,877 - OHPLBJKB_02513 0.38 +0.5
2,626,877 - OHPLBJKB_02513 0.38 +1.3
2,626,878 + OHPLBJKB_02513 0.39 +0.6
2,626,878 + OHPLBJKB_02513 0.39 +0.6
2,626,879 - OHPLBJKB_02513 0.39 -0.2
2,626,879 - OHPLBJKB_02513 0.39 -0.1
2,626,879 - OHPLBJKB_02513 0.39 +0.7
2,626,879 - OHPLBJKB_02513 0.39 +0.6
2,626,885 + OHPLBJKB_02513 0.40 -0.9
2,626,885 + OHPLBJKB_02513 0.40 +0.3
2,626,938 + OHPLBJKB_02513 0.53 -1.5
2,626,938 + OHPLBJKB_02513 0.53 +0.4
2,626,939 - OHPLBJKB_02513 0.54 -0.6
2,626,942 + OHPLBJKB_02513 0.54 -1.1
2,626,942 + OHPLBJKB_02513 0.54 +0.3
2,626,943 - OHPLBJKB_02513 0.55 +0.5
2,627,018 - OHPLBJKB_02513 0.73 -0.2

Or see this region's nucleotide sequence