Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02443 and OHPLBJKB_02444 are separated by 476 nucleotides OHPLBJKB_02444 and OHPLBJKB_02445 are separated by 123 nucleotides OHPLBJKB_02445 and OHPLBJKB_02446 are separated by 120 nucleotides
OHPLBJKB_02443: OHPLBJKB_02443 - hypothetical protein, at 2,555,143 to 2,555,790
_02443
OHPLBJKB_02444: OHPLBJKB_02444 - Aldehyde-alcohol dehydrogenase, at 2,556,267 to 2,558,942
_02444
OHPLBJKB_02445: OHPLBJKB_02445 - IS4 family transposase ISCro3, at 2,559,066 to 2,559,251
_02445
OHPLBJKB_02446: OHPLBJKB_02446 - hypothetical protein, at 2,559,372 to 2,559,962
_02446
Position (kb)
2556
2557
2558
2559 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2555.305 kb on + strand, within OHPLBJKB_02443 at 2555.345 kb on + strand, within OHPLBJKB_02443 at 2555.345 kb on + strand, within OHPLBJKB_02443 at 2555.346 kb on - strand, within OHPLBJKB_02443 at 2555.349 kb on + strand, within OHPLBJKB_02443 at 2555.349 kb on + strand, within OHPLBJKB_02443 at 2555.349 kb on + strand, within OHPLBJKB_02443 at 2555.349 kb on + strand, within OHPLBJKB_02443 at 2555.349 kb on + strand, within OHPLBJKB_02443 at 2555.350 kb on - strand, within OHPLBJKB_02443 at 2555.350 kb on - strand, within OHPLBJKB_02443 at 2555.350 kb on - strand, within OHPLBJKB_02443 at 2555.350 kb on - strand, within OHPLBJKB_02443 at 2555.383 kb on - strand, within OHPLBJKB_02443 at 2555.569 kb on + strand, within OHPLBJKB_02443 at 2555.569 kb on + strand, within OHPLBJKB_02443 at 2555.570 kb on - strand, within OHPLBJKB_02443 at 2555.571 kb on + strand, within OHPLBJKB_02443 at 2555.572 kb on - strand, within OHPLBJKB_02443 at 2555.646 kb on + strand, within OHPLBJKB_02443 at 2555.646 kb on + strand, within OHPLBJKB_02443 at 2555.652 kb on + strand, within OHPLBJKB_02443 at 2555.710 kb on - strand, within OHPLBJKB_02443 at 2555.794 kb on + strand at 2555.817 kb on - strand at 2555.828 kb on + strand at 2555.829 kb on - strand at 2555.832 kb on + strand at 2555.832 kb on + strand at 2555.832 kb on + strand at 2555.832 kb on + strand at 2555.833 kb on - strand at 2555.833 kb on - strand at 2555.833 kb on - strand at 2555.886 kb on + strand at 2555.887 kb on - strand at 2555.891 kb on - strand at 2555.891 kb on - strand at 2555.894 kb on + strand at 2555.923 kb on + strand at 2555.942 kb on - strand at 2555.947 kb on - strand at 2555.980 kb on + strand at 2555.984 kb on + strand at 2555.984 kb on + strand at 2555.984 kb on + strand at 2555.985 kb on - strand at 2555.985 kb on - strand at 2555.985 kb on - strand at 2555.985 kb on - strand at 2556.099 kb on + strand at 2556.105 kb on + strand at 2556.105 kb on + strand at 2556.105 kb on + strand at 2556.106 kb on - strand at 2556.108 kb on + strand at 2556.108 kb on + strand at 2556.109 kb on - strand at 2556.114 kb on + strand at 2556.115 kb on - strand at 2556.207 kb on - strand at 2556.208 kb on + strand at 2556.208 kb on + strand at 2556.208 kb on + strand at 2556.234 kb on - strand at 2556.252 kb on + strand at 2556.276 kb on - strand at 2556.276 kb on - strand at 2556.279 kb on - strand at 2556.294 kb on - strand at 2556.305 kb on - strand at 2556.333 kb on + strand at 2556.359 kb on - strand at 2556.490 kb on - strand at 2556.490 kb on - strand at 2556.491 kb on + strand at 2556.492 kb on - strand at 2556.492 kb on - strand at 2556.492 kb on - strand at 2556.492 kb on - strand at 2556.492 kb on - strand at 2556.495 kb on + strand at 2556.495 kb on + strand at 2556.496 kb on - strand at 2556.496 kb on - strand at 2556.496 kb on - strand at 2556.496 kb on - strand at 2556.496 kb on - strand at 2556.496 kb on - strand at 2556.496 kb on - strand at 2556.506 kb on + strand at 2556.584 kb on + strand, within OHPLBJKB_02444 at 2556.584 kb on + strand, within OHPLBJKB_02444 at 2556.584 kb on + strand, within OHPLBJKB_02444 at 2556.585 kb on - strand, within OHPLBJKB_02444 at 2556.669 kb on - strand, within OHPLBJKB_02444 at 2556.873 kb on + strand, within OHPLBJKB_02444 at 2556.944 kb on + strand, within OHPLBJKB_02444 at 2556.967 kb on + strand, within OHPLBJKB_02444 at 2556.968 kb on - strand, within OHPLBJKB_02444 at 2557.041 kb on + strand, within OHPLBJKB_02444 at 2557.051 kb on + strand, within OHPLBJKB_02444 at 2557.172 kb on + strand, within OHPLBJKB_02444 at 2557.172 kb on + strand, within OHPLBJKB_02444 at 2557.173 kb on - strand, within OHPLBJKB_02444 at 2557.296 kb on + strand, within OHPLBJKB_02444 at 2557.296 kb on + strand, within OHPLBJKB_02444 at 2557.297 kb on - strand, within OHPLBJKB_02444 at 2557.350 kb on - strand, within OHPLBJKB_02444 at 2557.380 kb on + strand, within OHPLBJKB_02444 at 2557.416 kb on + strand, within OHPLBJKB_02444 at 2557.492 kb on - strand, within OHPLBJKB_02444 at 2557.492 kb on - strand, within OHPLBJKB_02444 at 2557.492 kb on - strand, within OHPLBJKB_02444 at 2557.493 kb on + strand, within OHPLBJKB_02444 at 2557.493 kb on + strand, within OHPLBJKB_02444 at 2557.494 kb on - strand, within OHPLBJKB_02444 at 2557.494 kb on - strand, within OHPLBJKB_02444 at 2557.644 kb on - strand, within OHPLBJKB_02444 at 2557.644 kb on - strand, within OHPLBJKB_02444 at 2557.644 kb on - strand, within OHPLBJKB_02444 at 2557.648 kb on - strand, within OHPLBJKB_02444 at 2557.648 kb on - strand, within OHPLBJKB_02444 at 2557.648 kb on - strand, within OHPLBJKB_02444 at 2557.938 kb on - strand, within OHPLBJKB_02444 at 2557.941 kb on + strand, within OHPLBJKB_02444 at 2557.942 kb on - strand, within OHPLBJKB_02444 at 2557.942 kb on - strand, within OHPLBJKB_02444 at 2557.942 kb on - strand, within OHPLBJKB_02444 at 2557.942 kb on - strand, within OHPLBJKB_02444 at 2557.985 kb on + strand, within OHPLBJKB_02444 at 2558.007 kb on + strand, within OHPLBJKB_02444 at 2558.008 kb on - strand, within OHPLBJKB_02444 at 2558.008 kb on - strand, within OHPLBJKB_02444 at 2558.098 kb on + strand, within OHPLBJKB_02444 at 2558.111 kb on + strand, within OHPLBJKB_02444 at 2558.250 kb on + strand, within OHPLBJKB_02444 at 2558.251 kb on - strand, within OHPLBJKB_02444 at 2558.251 kb on - strand, within OHPLBJKB_02444 at 2558.251 kb on - strand, within OHPLBJKB_02444 at 2558.251 kb on - strand, within OHPLBJKB_02444 at 2558.251 kb on - strand, within OHPLBJKB_02444 at 2558.319 kb on + strand, within OHPLBJKB_02444 at 2558.320 kb on - strand, within OHPLBJKB_02444 at 2558.320 kb on - strand, within OHPLBJKB_02444 at 2558.428 kb on + strand, within OHPLBJKB_02444 at 2558.428 kb on + strand, within OHPLBJKB_02444 at 2558.428 kb on + strand, within OHPLBJKB_02444 at 2558.428 kb on + strand, within OHPLBJKB_02444 at 2558.428 kb on + strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.429 kb on - strand, within OHPLBJKB_02444 at 2558.517 kb on + strand, within OHPLBJKB_02444 at 2558.562 kb on + strand, within OHPLBJKB_02444 at 2558.562 kb on + strand, within OHPLBJKB_02444 at 2558.645 kb on + strand, within OHPLBJKB_02444 at 2558.645 kb on + strand, within OHPLBJKB_02444 at 2558.645 kb on + strand, within OHPLBJKB_02444 at 2558.646 kb on - strand, within OHPLBJKB_02444 at 2558.756 kb on + strand at 2558.850 kb on + strand at 2558.851 kb on - strand at 2558.865 kb on + strand at 2558.865 kb on + strand at 2558.866 kb on - strand at 2558.870 kb on - strand at 2558.965 kb on + strand at 2559.004 kb on + strand at 2559.032 kb on + strand at 2559.032 kb on + strand at 2559.032 kb on + strand at 2559.033 kb on - strand at 2559.133 kb on + strand, within OHPLBJKB_02445 at 2559.133 kb on + strand, within OHPLBJKB_02445 at 2559.133 kb on + strand, within OHPLBJKB_02445 at 2559.134 kb on - strand, within OHPLBJKB_02445 at 2559.163 kb on + strand, within OHPLBJKB_02445 at 2559.415 kb on - strand at 2559.501 kb on + strand, within OHPLBJKB_02446 at 2559.505 kb on - strand, within OHPLBJKB_02446 at 2559.674 kb on + strand, within OHPLBJKB_02446 at 2559.790 kb on + strand, within OHPLBJKB_02446 at 2559.791 kb on - strand, within OHPLBJKB_02446 at 2559.791 kb on - strand, within OHPLBJKB_02446 at 2559.942 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,555,305 + OHPLBJKB_02443 0.25 +0.2 2,555,345 + OHPLBJKB_02443 0.31 -0.7 2,555,345 + OHPLBJKB_02443 0.31 -1.0 2,555,346 - OHPLBJKB_02443 0.31 +0.4 2,555,349 + OHPLBJKB_02443 0.32 -1.3 2,555,349 + OHPLBJKB_02443 0.32 -0.1 2,555,349 + OHPLBJKB_02443 0.32 +0.1 2,555,349 + OHPLBJKB_02443 0.32 -0.3 2,555,349 + OHPLBJKB_02443 0.32 +0.4 2,555,350 - OHPLBJKB_02443 0.32 +1.0 2,555,350 - OHPLBJKB_02443 0.32 +0.7 2,555,350 - OHPLBJKB_02443 0.32 +0.4 2,555,350 - OHPLBJKB_02443 0.32 -1.2 2,555,383 - OHPLBJKB_02443 0.37 -0.6 2,555,569 + OHPLBJKB_02443 0.66 +0.5 2,555,569 + OHPLBJKB_02443 0.66 -2.9 2,555,570 - OHPLBJKB_02443 0.66 +0.8 2,555,571 + OHPLBJKB_02443 0.66 -0.0 2,555,572 - OHPLBJKB_02443 0.66 -0.1 2,555,646 + OHPLBJKB_02443 0.78 -0.1 2,555,646 + OHPLBJKB_02443 0.78 +0.8 2,555,652 + OHPLBJKB_02443 0.79 +0.1 2,555,710 - OHPLBJKB_02443 0.88 +0.3 2,555,794 + -0.8 2,555,817 - +0.3 2,555,828 + -0.3 2,555,829 - -0.1 2,555,832 + +0.5 2,555,832 + -0.0 2,555,832 + +0.5 2,555,832 + +0.2 2,555,833 - -0.1 2,555,833 - -0.7 2,555,833 - -0.8 2,555,886 + +1.1 2,555,887 - +1.5 2,555,891 - -0.4 2,555,891 - +0.1 2,555,894 + +0.4 2,555,923 + -0.0 2,555,942 - -0.1 2,555,947 - +0.1 2,555,980 + +0.5 2,555,984 + -0.0 2,555,984 + +0.8 2,555,984 + -0.7 2,555,985 - -0.3 2,555,985 - +0.2 2,555,985 - -0.1 2,555,985 - +1.1 2,556,099 + -0.6 2,556,105 + +0.5 2,556,105 + -1.0 2,556,105 + -0.1 2,556,106 - -0.9 2,556,108 + +0.8 2,556,108 + -0.1 2,556,109 - +0.9 2,556,114 + -0.8 2,556,115 - +1.1 2,556,207 - -0.1 2,556,208 + +0.3 2,556,208 + +0.1 2,556,208 + -1.0 2,556,234 - -0.4 2,556,252 + -0.4 2,556,276 - +0.3 2,556,276 - +0.7 2,556,279 - -0.7 2,556,294 - +1.0 2,556,305 - -0.4 2,556,333 + -0.1 2,556,359 - -0.0 2,556,490 - +0.3 2,556,490 - -1.2 2,556,491 + +0.1 2,556,492 - -0.0 2,556,492 - +1.1 2,556,492 - -0.2 2,556,492 - -0.2 2,556,492 - -1.3 2,556,495 + -1.0 2,556,495 + +0.2 2,556,496 - -1.3 2,556,496 - +0.6 2,556,496 - +0.3 2,556,496 - +0.3 2,556,496 - -0.1 2,556,496 - -0.2 2,556,496 - -0.3 2,556,506 + +0.4 2,556,584 + OHPLBJKB_02444 0.12 -0.2 2,556,584 + OHPLBJKB_02444 0.12 -0.0 2,556,584 + OHPLBJKB_02444 0.12 -0.7 2,556,585 - OHPLBJKB_02444 0.12 -0.3 2,556,669 - OHPLBJKB_02444 0.15 +0.2 2,556,873 + OHPLBJKB_02444 0.23 -0.2 2,556,944 + OHPLBJKB_02444 0.25 -1.0 2,556,967 + OHPLBJKB_02444 0.26 -0.2 2,556,968 - OHPLBJKB_02444 0.26 -0.2 2,557,041 + OHPLBJKB_02444 0.29 -0.2 2,557,051 + OHPLBJKB_02444 0.29 +1.7 2,557,172 + OHPLBJKB_02444 0.34 +0.8 2,557,172 + OHPLBJKB_02444 0.34 -0.5 2,557,173 - OHPLBJKB_02444 0.34 +0.4 2,557,296 + OHPLBJKB_02444 0.38 -0.7 2,557,296 + OHPLBJKB_02444 0.38 -0.1 2,557,297 - OHPLBJKB_02444 0.38 +0.4 2,557,350 - OHPLBJKB_02444 0.40 -2.3 2,557,380 + OHPLBJKB_02444 0.42 -0.3 2,557,416 + OHPLBJKB_02444 0.43 -0.7 2,557,492 - OHPLBJKB_02444 0.46 -0.7 2,557,492 - OHPLBJKB_02444 0.46 +0.7 2,557,492 - OHPLBJKB_02444 0.46 -0.6 2,557,493 + OHPLBJKB_02444 0.46 -0.3 2,557,493 + OHPLBJKB_02444 0.46 -1.9 2,557,494 - OHPLBJKB_02444 0.46 +0.3 2,557,494 - OHPLBJKB_02444 0.46 -0.7 2,557,644 - OHPLBJKB_02444 0.51 +0.2 2,557,644 - OHPLBJKB_02444 0.51 -0.7 2,557,644 - OHPLBJKB_02444 0.51 -1.5 2,557,648 - OHPLBJKB_02444 0.52 +0.4 2,557,648 - OHPLBJKB_02444 0.52 +0.8 2,557,648 - OHPLBJKB_02444 0.52 -0.3 2,557,938 - OHPLBJKB_02444 0.62 +0.2 2,557,941 + OHPLBJKB_02444 0.63 -0.1 2,557,942 - OHPLBJKB_02444 0.63 -0.5 2,557,942 - OHPLBJKB_02444 0.63 -0.3 2,557,942 - OHPLBJKB_02444 0.63 -0.5 2,557,942 - OHPLBJKB_02444 0.63 +0.0 2,557,985 + OHPLBJKB_02444 0.64 +0.6 2,558,007 + OHPLBJKB_02444 0.65 +0.7 2,558,008 - OHPLBJKB_02444 0.65 +1.5 2,558,008 - OHPLBJKB_02444 0.65 +1.0 2,558,098 + OHPLBJKB_02444 0.68 -0.4 2,558,111 + OHPLBJKB_02444 0.69 +0.0 2,558,250 + OHPLBJKB_02444 0.74 -0.3 2,558,251 - OHPLBJKB_02444 0.74 -1.0 2,558,251 - OHPLBJKB_02444 0.74 +0.2 2,558,251 - OHPLBJKB_02444 0.74 +0.4 2,558,251 - OHPLBJKB_02444 0.74 +1.0 2,558,251 - OHPLBJKB_02444 0.74 -1.4 2,558,319 + OHPLBJKB_02444 0.77 +0.7 2,558,320 - OHPLBJKB_02444 0.77 -1.3 2,558,320 - OHPLBJKB_02444 0.77 +0.4 2,558,428 + OHPLBJKB_02444 0.81 +0.6 2,558,428 + OHPLBJKB_02444 0.81 -0.4 2,558,428 + OHPLBJKB_02444 0.81 +0.7 2,558,428 + OHPLBJKB_02444 0.81 -0.4 2,558,428 + OHPLBJKB_02444 0.81 -1.4 2,558,429 - OHPLBJKB_02444 0.81 -0.0 2,558,429 - OHPLBJKB_02444 0.81 -0.4 2,558,429 - OHPLBJKB_02444 0.81 -0.8 2,558,429 - OHPLBJKB_02444 0.81 -2.1 2,558,429 - OHPLBJKB_02444 0.81 -0.0 2,558,429 - OHPLBJKB_02444 0.81 +0.2 2,558,429 - OHPLBJKB_02444 0.81 -0.0 2,558,429 - OHPLBJKB_02444 0.81 +1.4 2,558,429 - OHPLBJKB_02444 0.81 +0.4 2,558,429 - OHPLBJKB_02444 0.81 +0.6 2,558,517 + OHPLBJKB_02444 0.84 -0.0 2,558,562 + OHPLBJKB_02444 0.86 +0.5 2,558,562 + OHPLBJKB_02444 0.86 +0.1 2,558,645 + OHPLBJKB_02444 0.89 -1.7 2,558,645 + OHPLBJKB_02444 0.89 -1.3 2,558,645 + OHPLBJKB_02444 0.89 +0.2 2,558,646 - OHPLBJKB_02444 0.89 -0.1 2,558,756 + -0.1 2,558,850 + -1.3 2,558,851 - +0.6 2,558,865 + +0.4 2,558,865 + -0.6 2,558,866 - -0.3 2,558,870 - -0.5 2,558,965 + -0.1 2,559,004 + -0.5 2,559,032 + -0.8 2,559,032 + -0.3 2,559,032 + +0.4 2,559,033 - -0.2 2,559,133 + OHPLBJKB_02445 0.36 -1.2 2,559,133 + OHPLBJKB_02445 0.36 -0.5 2,559,133 + OHPLBJKB_02445 0.36 -0.1 2,559,134 - OHPLBJKB_02445 0.37 +1.0 2,559,163 + OHPLBJKB_02445 0.52 +0.4 2,559,415 - -0.1 2,559,501 + OHPLBJKB_02446 0.22 +0.6 2,559,505 - OHPLBJKB_02446 0.23 -0.5 2,559,674 + OHPLBJKB_02446 0.51 -0.1 2,559,790 + OHPLBJKB_02446 0.71 +0.4 2,559,791 - OHPLBJKB_02446 0.71 +0.2 2,559,791 - OHPLBJKB_02446 0.71 +0.4 2,559,942 - +0.9
Or see this region's nucleotide sequence