Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02070 and OHPLBJKB_02071 are separated by 333 nucleotides OHPLBJKB_02071 and OHPLBJKB_02072 are separated by 50 nucleotides
OHPLBJKB_02070: OHPLBJKB_02070 - Murein DD-endopeptidase MepH, at 2,145,443 to 2,146,258
_02070
OHPLBJKB_02071: OHPLBJKB_02071 - Glutaredoxin 4, at 2,146,592 to 2,146,939
_02071
OHPLBJKB_02072: OHPLBJKB_02072 - ATP-dependent RNA helicase SrmB, at 2,146,990 to 2,151,606
_02072
Position (kb)
2146
2147 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2145.614 kb on - strand, within OHPLBJKB_02070 at 2145.649 kb on + strand, within OHPLBJKB_02070 at 2145.681 kb on + strand, within OHPLBJKB_02070 at 2145.681 kb on + strand, within OHPLBJKB_02070 at 2145.682 kb on - strand, within OHPLBJKB_02070 at 2145.682 kb on - strand, within OHPLBJKB_02070 at 2145.682 kb on - strand, within OHPLBJKB_02070 at 2145.682 kb on - strand, within OHPLBJKB_02070 at 2145.729 kb on + strand, within OHPLBJKB_02070 at 2145.729 kb on + strand, within OHPLBJKB_02070 at 2145.735 kb on + strand, within OHPLBJKB_02070 at 2145.738 kb on + strand, within OHPLBJKB_02070 at 2145.925 kb on + strand, within OHPLBJKB_02070 at 2145.926 kb on - strand, within OHPLBJKB_02070 at 2145.935 kb on - strand, within OHPLBJKB_02070 at 2145.967 kb on + strand, within OHPLBJKB_02070 at 2145.967 kb on + strand, within OHPLBJKB_02070 at 2146.004 kb on - strand, within OHPLBJKB_02070 at 2146.063 kb on + strand, within OHPLBJKB_02070 at 2146.141 kb on + strand, within OHPLBJKB_02070 at 2146.141 kb on + strand, within OHPLBJKB_02070 at 2146.142 kb on - strand, within OHPLBJKB_02070 at 2146.142 kb on - strand, within OHPLBJKB_02070 at 2146.142 kb on - strand, within OHPLBJKB_02070 at 2146.196 kb on + strand at 2146.323 kb on + strand at 2146.323 kb on + strand at 2146.324 kb on - strand at 2146.330 kb on + strand at 2146.331 kb on - strand at 2146.331 kb on - strand at 2146.331 kb on - strand at 2146.349 kb on + strand at 2146.349 kb on + strand at 2146.423 kb on + strand at 2146.423 kb on + strand at 2146.498 kb on - strand at 2146.546 kb on + strand at 2146.547 kb on - strand at 2146.649 kb on + strand, within OHPLBJKB_02071 at 2146.737 kb on - strand, within OHPLBJKB_02071 at 2146.737 kb on - strand, within OHPLBJKB_02071 at 2146.784 kb on + strand, within OHPLBJKB_02071 at 2146.784 kb on + strand, within OHPLBJKB_02071 at 2146.784 kb on + strand, within OHPLBJKB_02071 at 2146.785 kb on - strand, within OHPLBJKB_02071 at 2146.785 kb on - strand, within OHPLBJKB_02071 at 2146.790 kb on - strand, within OHPLBJKB_02071 at 2146.910 kb on + strand at 2146.910 kb on + strand at 2146.910 kb on + strand at 2146.910 kb on + strand at 2146.910 kb on + strand at 2146.910 kb on + strand at 2146.911 kb on - strand at 2146.911 kb on - strand at 2146.952 kb on + strand at 2147.072 kb on - strand at 2147.210 kb on + strand at 2147.210 kb on + strand at 2147.210 kb on + strand at 2147.211 kb on - strand at 2147.211 kb on - strand at 2147.349 kb on + strand at 2147.349 kb on + strand at 2147.350 kb on - strand at 2147.400 kb on + strand at 2147.401 kb on - strand at 2147.441 kb on - strand at 2147.478 kb on + strand, within OHPLBJKB_02072 at 2147.478 kb on + strand, within OHPLBJKB_02072 at 2147.478 kb on + strand, within OHPLBJKB_02072 at 2147.478 kb on + strand, within OHPLBJKB_02072 at 2147.479 kb on - strand, within OHPLBJKB_02072 at 2147.571 kb on + strand, within OHPLBJKB_02072 at 2147.660 kb on + strand, within OHPLBJKB_02072 at 2147.660 kb on + strand, within OHPLBJKB_02072 at 2147.661 kb on - strand, within OHPLBJKB_02072 at 2147.661 kb on - strand, within OHPLBJKB_02072 at 2147.661 kb on - strand, within OHPLBJKB_02072 at 2147.661 kb on - strand, within OHPLBJKB_02072 at 2147.661 kb on - strand, within OHPLBJKB_02072 at 2147.661 kb on - strand, within OHPLBJKB_02072 at 2147.666 kb on - strand, within OHPLBJKB_02072 at 2147.690 kb on + strand, within OHPLBJKB_02072 at 2147.690 kb on + strand, within OHPLBJKB_02072 at 2147.930 kb on - strand, within OHPLBJKB_02072
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,145,614 - OHPLBJKB_02070 0.21 +0.7 2,145,649 + OHPLBJKB_02070 0.25 -0.2 2,145,681 + OHPLBJKB_02070 0.29 +0.1 2,145,681 + OHPLBJKB_02070 0.29 -1.3 2,145,682 - OHPLBJKB_02070 0.29 -1.7 2,145,682 - OHPLBJKB_02070 0.29 -0.1 2,145,682 - OHPLBJKB_02070 0.29 -1.2 2,145,682 - OHPLBJKB_02070 0.29 -1.6 2,145,729 + OHPLBJKB_02070 0.35 -1.6 2,145,729 + OHPLBJKB_02070 0.35 +1.2 2,145,735 + OHPLBJKB_02070 0.36 +1.6 2,145,738 + OHPLBJKB_02070 0.36 -0.3 2,145,925 + OHPLBJKB_02070 0.59 +0.3 2,145,926 - OHPLBJKB_02070 0.59 -1.3 2,145,935 - OHPLBJKB_02070 0.60 -0.0 2,145,967 + OHPLBJKB_02070 0.64 +0.2 2,145,967 + OHPLBJKB_02070 0.64 -0.2 2,146,004 - OHPLBJKB_02070 0.69 -0.9 2,146,063 + OHPLBJKB_02070 0.76 -0.3 2,146,141 + OHPLBJKB_02070 0.86 -0.7 2,146,141 + OHPLBJKB_02070 0.86 -0.6 2,146,142 - OHPLBJKB_02070 0.86 -0.3 2,146,142 - OHPLBJKB_02070 0.86 -0.4 2,146,142 - OHPLBJKB_02070 0.86 -0.8 2,146,196 + -1.0 2,146,323 + -0.7 2,146,323 + +0.3 2,146,324 - -0.7 2,146,330 + +1.1 2,146,331 - +0.8 2,146,331 - +0.4 2,146,331 - -1.3 2,146,349 + -1.3 2,146,349 + +0.4 2,146,423 + +0.5 2,146,423 + -0.1 2,146,498 - +0.1 2,146,546 + +0.6 2,146,547 - +0.8 2,146,649 + OHPLBJKB_02071 0.16 +0.1 2,146,737 - OHPLBJKB_02071 0.42 +0.4 2,146,737 - OHPLBJKB_02071 0.42 -0.8 2,146,784 + OHPLBJKB_02071 0.55 -0.9 2,146,784 + OHPLBJKB_02071 0.55 -0.5 2,146,784 + OHPLBJKB_02071 0.55 +0.1 2,146,785 - OHPLBJKB_02071 0.55 +0.7 2,146,785 - OHPLBJKB_02071 0.55 -1.3 2,146,790 - OHPLBJKB_02071 0.57 -1.3 2,146,910 + +0.3 2,146,910 + -0.1 2,146,910 + -0.4 2,146,910 + +0.3 2,146,910 + -2.4 2,146,910 + +0.3 2,146,911 - +0.7 2,146,911 - +0.6 2,146,952 + -2.0 2,147,072 - +0.2 2,147,210 + -1.1 2,147,210 + +1.2 2,147,210 + +0.3 2,147,211 - +1.4 2,147,211 - +0.1 2,147,349 + -0.1 2,147,349 + +0.8 2,147,350 - +0.3 2,147,400 + -0.1 2,147,401 - +0.3 2,147,441 - +0.5 2,147,478 + OHPLBJKB_02072 0.11 +0.2 2,147,478 + OHPLBJKB_02072 0.11 -1.1 2,147,478 + OHPLBJKB_02072 0.11 +0.2 2,147,478 + OHPLBJKB_02072 0.11 +0.1 2,147,479 - OHPLBJKB_02072 0.11 -0.5 2,147,571 + OHPLBJKB_02072 0.13 +0.8 2,147,660 + OHPLBJKB_02072 0.15 +0.3 2,147,660 + OHPLBJKB_02072 0.15 +0.2 2,147,661 - OHPLBJKB_02072 0.15 +0.4 2,147,661 - OHPLBJKB_02072 0.15 -0.3 2,147,661 - OHPLBJKB_02072 0.15 +2.1 2,147,661 - OHPLBJKB_02072 0.15 -0.8 2,147,661 - OHPLBJKB_02072 0.15 +0.2 2,147,661 - OHPLBJKB_02072 0.15 +0.1 2,147,666 - OHPLBJKB_02072 0.15 +1.1 2,147,690 + OHPLBJKB_02072 0.15 +0.0 2,147,690 + OHPLBJKB_02072 0.15 -0.6 2,147,930 - OHPLBJKB_02072 0.20 +0.9
Or see this region's nucleotide sequence