Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01454 and OHPLBJKB_01455 overlap by 1 nucleotides OHPLBJKB_01455 and OHPLBJKB_01456 overlap by 4 nucleotides
OHPLBJKB_01454: OHPLBJKB_01454 - Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase, at 1,497,279 to 1,498,931
_01454
OHPLBJKB_01455: OHPLBJKB_01455 - putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, at 1,498,931 to 1,499,821
_01455
OHPLBJKB_01456: OHPLBJKB_01456 - Bifunctional polymyxin resistance protein ArnA, at 1,499,818 to 1,501,800
_01456
Position (kb)
1498
1499
1500 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.988 kb on + strand, within OHPLBJKB_01454 at 1497.989 kb on - strand, within OHPLBJKB_01454 at 1497.989 kb on - strand, within OHPLBJKB_01454 at 1497.989 kb on - strand, within OHPLBJKB_01454 at 1498.001 kb on + strand, within OHPLBJKB_01454 at 1498.002 kb on - strand, within OHPLBJKB_01454 at 1498.054 kb on + strand, within OHPLBJKB_01454 at 1498.093 kb on + strand, within OHPLBJKB_01454 at 1498.093 kb on + strand, within OHPLBJKB_01454 at 1498.094 kb on - strand, within OHPLBJKB_01454 at 1498.094 kb on - strand, within OHPLBJKB_01454 at 1498.094 kb on - strand, within OHPLBJKB_01454 at 1498.111 kb on - strand, within OHPLBJKB_01454 at 1498.154 kb on - strand, within OHPLBJKB_01454 at 1498.154 kb on - strand, within OHPLBJKB_01454 at 1498.154 kb on - strand, within OHPLBJKB_01454 at 1498.154 kb on - strand, within OHPLBJKB_01454 at 1498.154 kb on - strand, within OHPLBJKB_01454 at 1498.154 kb on - strand, within OHPLBJKB_01454 at 1498.157 kb on - strand, within OHPLBJKB_01454 at 1498.172 kb on + strand, within OHPLBJKB_01454 at 1498.172 kb on + strand, within OHPLBJKB_01454 at 1498.173 kb on - strand, within OHPLBJKB_01454 at 1498.173 kb on - strand, within OHPLBJKB_01454 at 1498.173 kb on - strand, within OHPLBJKB_01454 at 1498.173 kb on - strand, within OHPLBJKB_01454 at 1498.205 kb on + strand, within OHPLBJKB_01454 at 1498.206 kb on - strand, within OHPLBJKB_01454 at 1498.206 kb on - strand, within OHPLBJKB_01454 at 1498.312 kb on + strand, within OHPLBJKB_01454 at 1498.365 kb on + strand, within OHPLBJKB_01454 at 1498.540 kb on + strand, within OHPLBJKB_01454 at 1498.540 kb on + strand, within OHPLBJKB_01454 at 1498.540 kb on + strand, within OHPLBJKB_01454 at 1498.541 kb on - strand, within OHPLBJKB_01454 at 1498.576 kb on + strand, within OHPLBJKB_01454 at 1498.581 kb on + strand, within OHPLBJKB_01454 at 1498.581 kb on + strand, within OHPLBJKB_01454 at 1498.581 kb on + strand, within OHPLBJKB_01454 at 1498.582 kb on - strand, within OHPLBJKB_01454 at 1498.618 kb on - strand, within OHPLBJKB_01454 at 1498.695 kb on - strand, within OHPLBJKB_01454 at 1498.707 kb on + strand, within OHPLBJKB_01454 at 1498.759 kb on + strand, within OHPLBJKB_01454 at 1498.759 kb on + strand, within OHPLBJKB_01454 at 1498.760 kb on - strand, within OHPLBJKB_01454 at 1498.764 kb on + strand, within OHPLBJKB_01454 at 1498.764 kb on + strand, within OHPLBJKB_01454 at 1498.765 kb on - strand, within OHPLBJKB_01454 at 1498.882 kb on + strand at 1498.882 kb on + strand at 1498.883 kb on - strand at 1498.892 kb on + strand at 1498.915 kb on + strand at 1498.916 kb on - strand at 1499.131 kb on + strand, within OHPLBJKB_01455 at 1499.131 kb on + strand, within OHPLBJKB_01455 at 1499.131 kb on + strand, within OHPLBJKB_01455 at 1499.131 kb on + strand, within OHPLBJKB_01455 at 1499.132 kb on - strand, within OHPLBJKB_01455 at 1499.133 kb on + strand, within OHPLBJKB_01455 at 1499.134 kb on - strand, within OHPLBJKB_01455 at 1499.150 kb on - strand, within OHPLBJKB_01455 at 1499.150 kb on - strand, within OHPLBJKB_01455 at 1499.231 kb on + strand, within OHPLBJKB_01455 at 1499.527 kb on + strand, within OHPLBJKB_01455 at 1499.572 kb on + strand, within OHPLBJKB_01455 at 1499.573 kb on - strand, within OHPLBJKB_01455 at 1499.613 kb on + strand, within OHPLBJKB_01455 at 1499.613 kb on + strand, within OHPLBJKB_01455 at 1499.614 kb on - strand, within OHPLBJKB_01455 at 1499.689 kb on + strand, within OHPLBJKB_01455 at 1499.731 kb on + strand, within OHPLBJKB_01455 at 1499.737 kb on + strand at 1499.738 kb on - strand at 1499.836 kb on - strand at 1499.890 kb on - strand at 1499.943 kb on + strand at 1499.953 kb on + strand at 1499.953 kb on + strand at 1499.953 kb on + strand at 1499.978 kb on + strand at 1499.979 kb on - strand at 1499.979 kb on - strand at 1500.158 kb on + strand, within OHPLBJKB_01456 at 1500.159 kb on - strand, within OHPLBJKB_01456 at 1500.226 kb on - strand, within OHPLBJKB_01456 at 1500.264 kb on + strand, within OHPLBJKB_01456 at 1500.297 kb on + strand, within OHPLBJKB_01456 at 1500.328 kb on - strand, within OHPLBJKB_01456 at 1500.353 kb on - strand, within OHPLBJKB_01456 at 1500.353 kb on - strand, within OHPLBJKB_01456 at 1500.394 kb on + strand, within OHPLBJKB_01456 at 1500.394 kb on + strand, within OHPLBJKB_01456 at 1500.394 kb on + strand, within OHPLBJKB_01456 at 1500.449 kb on - strand, within OHPLBJKB_01456 at 1500.473 kb on + strand, within OHPLBJKB_01456 at 1500.473 kb on + strand, within OHPLBJKB_01456 at 1500.473 kb on + strand, within OHPLBJKB_01456 at 1500.474 kb on - strand, within OHPLBJKB_01456 at 1500.474 kb on - strand, within OHPLBJKB_01456 at 1500.474 kb on - strand, within OHPLBJKB_01456 at 1500.474 kb on - strand, within OHPLBJKB_01456 at 1500.483 kb on + strand, within OHPLBJKB_01456 at 1500.534 kb on - strand, within OHPLBJKB_01456 at 1500.607 kb on - strand, within OHPLBJKB_01456 at 1500.668 kb on + strand, within OHPLBJKB_01456 at 1500.669 kb on - strand, within OHPLBJKB_01456 at 1500.690 kb on + strand, within OHPLBJKB_01456 at 1500.779 kb on + strand, within OHPLBJKB_01456
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 1,497,988 + OHPLBJKB_01454 0.43 -0.4 1,497,988 + OHPLBJKB_01454 0.43 -1.0 1,497,988 + OHPLBJKB_01454 0.43 +0.9 1,497,988 + OHPLBJKB_01454 0.43 +0.4 1,497,988 + OHPLBJKB_01454 0.43 -0.4 1,497,988 + OHPLBJKB_01454 0.43 +0.8 1,497,988 + OHPLBJKB_01454 0.43 -2.3 1,497,988 + OHPLBJKB_01454 0.43 +0.5 1,497,988 + OHPLBJKB_01454 0.43 +0.8 1,497,988 + OHPLBJKB_01454 0.43 +0.9 1,497,988 + OHPLBJKB_01454 0.43 -0.6 1,497,989 - OHPLBJKB_01454 0.43 -0.6 1,497,989 - OHPLBJKB_01454 0.43 +0.6 1,497,989 - OHPLBJKB_01454 0.43 +0.9 1,498,001 + OHPLBJKB_01454 0.44 +0.7 1,498,002 - OHPLBJKB_01454 0.44 +2.0 1,498,054 + OHPLBJKB_01454 0.47 -0.9 1,498,093 + OHPLBJKB_01454 0.49 +0.1 1,498,093 + OHPLBJKB_01454 0.49 -0.4 1,498,094 - OHPLBJKB_01454 0.49 -1.4 1,498,094 - OHPLBJKB_01454 0.49 -0.1 1,498,094 - OHPLBJKB_01454 0.49 +0.3 1,498,111 - OHPLBJKB_01454 0.50 +1.4 1,498,154 - OHPLBJKB_01454 0.53 +0.2 1,498,154 - OHPLBJKB_01454 0.53 +0.1 1,498,154 - OHPLBJKB_01454 0.53 -1.2 1,498,154 - OHPLBJKB_01454 0.53 -0.5 1,498,154 - OHPLBJKB_01454 0.53 -0.6 1,498,154 - OHPLBJKB_01454 0.53 +1.2 1,498,157 - OHPLBJKB_01454 0.53 +0.2 1,498,172 + OHPLBJKB_01454 0.54 +0.5 1,498,172 + OHPLBJKB_01454 0.54 -1.2 1,498,173 - OHPLBJKB_01454 0.54 +1.2 1,498,173 - OHPLBJKB_01454 0.54 +0.6 1,498,173 - OHPLBJKB_01454 0.54 -0.4 1,498,173 - OHPLBJKB_01454 0.54 +1.3 1,498,205 + OHPLBJKB_01454 0.56 -0.4 1,498,206 - OHPLBJKB_01454 0.56 -1.7 1,498,206 - OHPLBJKB_01454 0.56 -0.2 1,498,312 + OHPLBJKB_01454 0.62 -0.1 1,498,365 + OHPLBJKB_01454 0.66 +0.4 1,498,540 + OHPLBJKB_01454 0.76 -0.6 1,498,540 + OHPLBJKB_01454 0.76 +0.1 1,498,540 + OHPLBJKB_01454 0.76 -0.6 1,498,541 - OHPLBJKB_01454 0.76 -2.3 1,498,576 + OHPLBJKB_01454 0.78 -0.4 1,498,581 + OHPLBJKB_01454 0.79 +1.0 1,498,581 + OHPLBJKB_01454 0.79 -1.3 1,498,581 + OHPLBJKB_01454 0.79 +0.3 1,498,582 - OHPLBJKB_01454 0.79 -0.2 1,498,618 - OHPLBJKB_01454 0.81 +0.4 1,498,695 - OHPLBJKB_01454 0.86 +0.6 1,498,707 + OHPLBJKB_01454 0.86 -0.8 1,498,759 + OHPLBJKB_01454 0.90 -0.3 1,498,759 + OHPLBJKB_01454 0.90 -1.2 1,498,760 - OHPLBJKB_01454 0.90 -0.2 1,498,764 + OHPLBJKB_01454 0.90 -0.6 1,498,764 + OHPLBJKB_01454 0.90 -0.7 1,498,765 - OHPLBJKB_01454 0.90 +0.1 1,498,882 + -1.2 1,498,882 + -0.4 1,498,883 - +0.2 1,498,892 + -0.9 1,498,915 + -1.4 1,498,916 - -0.5 1,499,131 + OHPLBJKB_01455 0.22 +0.0 1,499,131 + OHPLBJKB_01455 0.22 +0.4 1,499,131 + OHPLBJKB_01455 0.22 -0.1 1,499,131 + OHPLBJKB_01455 0.22 -0.2 1,499,132 - OHPLBJKB_01455 0.23 -1.0 1,499,133 + OHPLBJKB_01455 0.23 -0.7 1,499,134 - OHPLBJKB_01455 0.23 -0.0 1,499,150 - OHPLBJKB_01455 0.25 -0.2 1,499,150 - OHPLBJKB_01455 0.25 -0.0 1,499,231 + OHPLBJKB_01455 0.34 -0.0 1,499,527 + OHPLBJKB_01455 0.67 -1.5 1,499,572 + OHPLBJKB_01455 0.72 +0.1 1,499,573 - OHPLBJKB_01455 0.72 +0.1 1,499,613 + OHPLBJKB_01455 0.77 -0.2 1,499,613 + OHPLBJKB_01455 0.77 -0.7 1,499,614 - OHPLBJKB_01455 0.77 -1.1 1,499,689 + OHPLBJKB_01455 0.85 -0.4 1,499,731 + OHPLBJKB_01455 0.90 -0.9 1,499,737 + +0.7 1,499,738 - -1.2 1,499,836 - -0.3 1,499,890 - -0.2 1,499,943 + +0.3 1,499,953 + -0.1 1,499,953 + -1.7 1,499,953 + -1.2 1,499,978 + +0.1 1,499,979 - +0.1 1,499,979 - -0.2 1,500,158 + OHPLBJKB_01456 0.17 +0.8 1,500,159 - OHPLBJKB_01456 0.17 +0.2 1,500,226 - OHPLBJKB_01456 0.21 -1.3 1,500,264 + OHPLBJKB_01456 0.22 +1.5 1,500,297 + OHPLBJKB_01456 0.24 -0.1 1,500,328 - OHPLBJKB_01456 0.26 +0.9 1,500,353 - OHPLBJKB_01456 0.27 -0.9 1,500,353 - OHPLBJKB_01456 0.27 -1.9 1,500,394 + OHPLBJKB_01456 0.29 -0.1 1,500,394 + OHPLBJKB_01456 0.29 -1.2 1,500,394 + OHPLBJKB_01456 0.29 -0.6 1,500,449 - OHPLBJKB_01456 0.32 -0.0 1,500,473 + OHPLBJKB_01456 0.33 +0.2 1,500,473 + OHPLBJKB_01456 0.33 +0.3 1,500,473 + OHPLBJKB_01456 0.33 -1.4 1,500,474 - OHPLBJKB_01456 0.33 +1.4 1,500,474 - OHPLBJKB_01456 0.33 +0.6 1,500,474 - OHPLBJKB_01456 0.33 +0.6 1,500,474 - OHPLBJKB_01456 0.33 +0.1 1,500,483 + OHPLBJKB_01456 0.34 -0.5 1,500,534 - OHPLBJKB_01456 0.36 +0.5 1,500,607 - OHPLBJKB_01456 0.40 -1.7 1,500,668 + OHPLBJKB_01456 0.43 -0.7 1,500,669 - OHPLBJKB_01456 0.43 -0.5 1,500,690 + OHPLBJKB_01456 0.44 +0.3 1,500,779 + OHPLBJKB_01456 0.48 +1.2
Or see this region's nucleotide sequence