Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01966 and OHPLBJKB_01967 are separated by 160 nucleotides OHPLBJKB_01967 and OHPLBJKB_01968 are separated by 116 nucleotides OHPLBJKB_01968 and OHPLBJKB_01969 are separated by 4 nucleotides
OHPLBJKB_01966: OHPLBJKB_01966 - Protease 4, at 2,041,851 to 2,043,707
_01966
OHPLBJKB_01967: OHPLBJKB_01967 - Putative NAD(P)H nitroreductase YdjA, at 2,043,868 to 2,044,419
_01967
OHPLBJKB_01968: OHPLBJKB_01968 - Selenide, water dikinase, at 2,044,536 to 2,045,579
_01968
OHPLBJKB_01969: OHPLBJKB_01969 - DNA topoisomerase 3, at 2,045,584 to 2,047,545
_01969
Position (kb)
2044
2045
2046 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2043.604 kb on - strand at 2043.614 kb on + strand at 2043.626 kb on + strand at 2043.626 kb on + strand at 2043.626 kb on + strand at 2043.626 kb on + strand at 2043.627 kb on - strand at 2043.627 kb on - strand at 2043.627 kb on - strand at 2043.630 kb on + strand at 2043.630 kb on + strand at 2043.631 kb on - strand at 2043.631 kb on - strand at 2043.686 kb on + strand at 2043.709 kb on + strand at 2043.710 kb on - strand at 2043.710 kb on - strand at 2043.710 kb on - strand at 2043.710 kb on - strand at 2043.710 kb on - strand at 2043.722 kb on + strand at 2043.722 kb on + strand at 2043.723 kb on - strand at 2043.723 kb on - strand at 2043.723 kb on - strand at 2043.748 kb on + strand at 2043.748 kb on + strand at 2043.748 kb on + strand at 2043.749 kb on - strand at 2043.749 kb on - strand at 2043.763 kb on + strand at 2043.779 kb on - strand at 2043.861 kb on + strand at 2043.984 kb on + strand, within OHPLBJKB_01967 at 2043.985 kb on - strand, within OHPLBJKB_01967 at 2043.985 kb on - strand, within OHPLBJKB_01967 at 2043.985 kb on - strand, within OHPLBJKB_01967 at 2044.343 kb on - strand, within OHPLBJKB_01967 at 2044.371 kb on + strand at 2044.371 kb on + strand at 2044.372 kb on - strand at 2044.372 kb on - strand at 2044.407 kb on - strand at 2044.411 kb on + strand at 2044.412 kb on - strand at 2044.412 kb on - strand at 2044.421 kb on - strand at 2044.421 kb on - strand at 2044.480 kb on + strand at 2044.592 kb on + strand at 2044.699 kb on - strand, within OHPLBJKB_01968 at 2044.746 kb on - strand, within OHPLBJKB_01968 at 2044.760 kb on + strand, within OHPLBJKB_01968 at 2044.914 kb on + strand, within OHPLBJKB_01968 at 2044.915 kb on - strand, within OHPLBJKB_01968 at 2045.289 kb on + strand, within OHPLBJKB_01968 at 2045.290 kb on - strand, within OHPLBJKB_01968 at 2045.325 kb on + strand, within OHPLBJKB_01968 at 2045.325 kb on + strand, within OHPLBJKB_01968 at 2045.325 kb on + strand, within OHPLBJKB_01968 at 2045.325 kb on + strand, within OHPLBJKB_01968 at 2045.326 kb on - strand, within OHPLBJKB_01968 at 2045.326 kb on - strand, within OHPLBJKB_01968 at 2045.326 kb on - strand, within OHPLBJKB_01968 at 2045.330 kb on + strand, within OHPLBJKB_01968 at 2045.330 kb on + strand, within OHPLBJKB_01968 at 2045.330 kb on + strand, within OHPLBJKB_01968 at 2045.330 kb on + strand, within OHPLBJKB_01968 at 2045.331 kb on - strand, within OHPLBJKB_01968 at 2045.331 kb on - strand, within OHPLBJKB_01968 at 2045.363 kb on + strand, within OHPLBJKB_01968 at 2045.364 kb on - strand, within OHPLBJKB_01968 at 2045.808 kb on - strand, within OHPLBJKB_01969 at 2045.808 kb on - strand, within OHPLBJKB_01969 at 2045.838 kb on + strand, within OHPLBJKB_01969 at 2045.839 kb on - strand, within OHPLBJKB_01969 at 2045.839 kb on - strand, within OHPLBJKB_01969 at 2045.839 kb on - strand, within OHPLBJKB_01969 at 2046.050 kb on + strand, within OHPLBJKB_01969 at 2046.097 kb on + strand, within OHPLBJKB_01969 at 2046.108 kb on + strand, within OHPLBJKB_01969 at 2046.121 kb on + strand, within OHPLBJKB_01969 at 2046.121 kb on + strand, within OHPLBJKB_01969 at 2046.121 kb on + strand, within OHPLBJKB_01969 at 2046.291 kb on + strand, within OHPLBJKB_01969 at 2046.353 kb on + strand, within OHPLBJKB_01969 at 2046.353 kb on + strand, within OHPLBJKB_01969 at 2046.353 kb on + strand, within OHPLBJKB_01969 at 2046.353 kb on + strand, within OHPLBJKB_01969 at 2046.418 kb on + strand, within OHPLBJKB_01969 at 2046.419 kb on - strand, within OHPLBJKB_01969 at 2046.419 kb on - strand, within OHPLBJKB_01969 at 2046.525 kb on + strand, within OHPLBJKB_01969 at 2046.558 kb on - strand, within OHPLBJKB_01969 at 2046.558 kb on - strand, within OHPLBJKB_01969 at 2046.558 kb on - strand, within OHPLBJKB_01969 at 2046.565 kb on + strand, within OHPLBJKB_01969
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,043,604 - -0.1 2,043,614 + +1.3 2,043,626 + -0.4 2,043,626 + +0.1 2,043,626 + -0.1 2,043,626 + -0.7 2,043,627 - +0.2 2,043,627 - +1.3 2,043,627 - -0.4 2,043,630 + +2.3 2,043,630 + -1.0 2,043,631 - +1.5 2,043,631 - -1.0 2,043,686 + +0.0 2,043,709 + +0.1 2,043,710 - +0.5 2,043,710 - -1.3 2,043,710 - -0.6 2,043,710 - -1.1 2,043,710 - +0.4 2,043,722 + -0.1 2,043,722 + -0.7 2,043,723 - -1.8 2,043,723 - -1.8 2,043,723 - -2.6 2,043,748 + -0.7 2,043,748 + +0.1 2,043,748 + +0.0 2,043,749 - +0.7 2,043,749 - +0.1 2,043,763 + -1.9 2,043,779 - -1.2 2,043,861 + -0.1 2,043,984 + OHPLBJKB_01967 0.21 -0.4 2,043,985 - OHPLBJKB_01967 0.21 +0.6 2,043,985 - OHPLBJKB_01967 0.21 -0.9 2,043,985 - OHPLBJKB_01967 0.21 -0.0 2,044,343 - OHPLBJKB_01967 0.86 +0.4 2,044,371 + +0.7 2,044,371 + +0.0 2,044,372 - -0.0 2,044,372 - -0.1 2,044,407 - -0.5 2,044,411 + -1.0 2,044,412 - -0.1 2,044,412 - -0.5 2,044,421 - -1.3 2,044,421 - +1.4 2,044,480 + -1.2 2,044,592 + +0.3 2,044,699 - OHPLBJKB_01968 0.16 +0.3 2,044,746 - OHPLBJKB_01968 0.20 -1.1 2,044,760 + OHPLBJKB_01968 0.21 +0.3 2,044,914 + OHPLBJKB_01968 0.36 +0.6 2,044,915 - OHPLBJKB_01968 0.36 +0.7 2,045,289 + OHPLBJKB_01968 0.72 +1.8 2,045,290 - OHPLBJKB_01968 0.72 -0.6 2,045,325 + OHPLBJKB_01968 0.76 +0.3 2,045,325 + OHPLBJKB_01968 0.76 -0.0 2,045,325 + OHPLBJKB_01968 0.76 +0.3 2,045,325 + OHPLBJKB_01968 0.76 -0.9 2,045,326 - OHPLBJKB_01968 0.76 +0.6 2,045,326 - OHPLBJKB_01968 0.76 +0.2 2,045,326 - OHPLBJKB_01968 0.76 -1.8 2,045,330 + OHPLBJKB_01968 0.76 +1.4 2,045,330 + OHPLBJKB_01968 0.76 +0.7 2,045,330 + OHPLBJKB_01968 0.76 -0.6 2,045,330 + OHPLBJKB_01968 0.76 +0.6 2,045,331 - OHPLBJKB_01968 0.76 +0.6 2,045,331 - OHPLBJKB_01968 0.76 -0.0 2,045,363 + OHPLBJKB_01968 0.79 +0.0 2,045,364 - OHPLBJKB_01968 0.79 +1.2 2,045,808 - OHPLBJKB_01969 0.11 +1.3 2,045,808 - OHPLBJKB_01969 0.11 -0.5 2,045,838 + OHPLBJKB_01969 0.13 +1.2 2,045,839 - OHPLBJKB_01969 0.13 -0.4 2,045,839 - OHPLBJKB_01969 0.13 -2.5 2,045,839 - OHPLBJKB_01969 0.13 -0.0 2,046,050 + OHPLBJKB_01969 0.24 +0.3 2,046,097 + OHPLBJKB_01969 0.26 +0.1 2,046,108 + OHPLBJKB_01969 0.27 -0.6 2,046,121 + OHPLBJKB_01969 0.27 +1.2 2,046,121 + OHPLBJKB_01969 0.27 +0.9 2,046,121 + OHPLBJKB_01969 0.27 -0.7 2,046,291 + OHPLBJKB_01969 0.36 +0.1 2,046,353 + OHPLBJKB_01969 0.39 -1.4 2,046,353 + OHPLBJKB_01969 0.39 +0.1 2,046,353 + OHPLBJKB_01969 0.39 +0.5 2,046,353 + OHPLBJKB_01969 0.39 -0.4 2,046,418 + OHPLBJKB_01969 0.43 +1.4 2,046,419 - OHPLBJKB_01969 0.43 +0.3 2,046,419 - OHPLBJKB_01969 0.43 -2.2 2,046,525 + OHPLBJKB_01969 0.48 +0.4 2,046,558 - OHPLBJKB_01969 0.50 -0.4 2,046,558 - OHPLBJKB_01969 0.50 -0.7 2,046,558 - OHPLBJKB_01969 0.50 -0.3 2,046,565 + OHPLBJKB_01969 0.50 -1.0
Or see this region's nucleotide sequence