Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01519

Experiment: lib only

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	lib only
1,578,502	-				-0.8
1,578,583	+		OHPLBJKB_01518	0.13	-0.2
1,578,584	-		OHPLBJKB_01518	0.13	-0.4
1,578,588	-		OHPLBJKB_01518	0.14	-0.4
1,578,611	-		OHPLBJKB_01518	0.17	+0.2
1,578,611	-		OHPLBJKB_01518	0.17	-0.1
1,578,734	+		OHPLBJKB_01518	0.36	+0.4
1,578,734	+		OHPLBJKB_01518	0.36	-0.6
1,578,734	+		OHPLBJKB_01518	0.36	+1.0
1,578,735	-		OHPLBJKB_01518	0.36	+0.1
1,578,735	-		OHPLBJKB_01518	0.36	-0.9
1,578,735	-		OHPLBJKB_01518	0.36	-0.6
1,578,738	+		OHPLBJKB_01518	0.37	-0.3
1,578,899	-		OHPLBJKB_01518	0.62	+0.1
1,578,955	+		OHPLBJKB_01518	0.70	-1.0
1,578,956	-		OHPLBJKB_01518	0.70	-0.2
1,578,956	-		OHPLBJKB_01518	0.70	-0.1
1,579,096	+				+0.7
1,579,148	-				-1.7
1,579,150	+				+1.3
1,579,150	+				-1.3
1,579,169	+				+0.3
1,579,170	-				+1.2
1,579,407	-				-0.8
1,579,445	-				+1.1
1,579,533	+				+0.1
1,579,618	-				-1.1
1,579,753	+		OHPLBJKB_01519	0.11	+0.6
1,579,754	-		OHPLBJKB_01519	0.11	+1.3
1,579,754	-		OHPLBJKB_01519	0.11	-0.5
1,579,812	-		OHPLBJKB_01519	0.13	+1.0
1,579,924	+		OHPLBJKB_01519	0.18	-0.7
1,579,982	+		OHPLBJKB_01519	0.20	-1.7
1,579,982	+		OHPLBJKB_01519	0.20	+0.2
1,580,055	-		OHPLBJKB_01519	0.23	-0.0
1,580,067	-		OHPLBJKB_01519	0.23	+1.5
1,580,067	-		OHPLBJKB_01519	0.23	-1.6
1,580,118	+		OHPLBJKB_01519	0.25	-0.5
1,580,120	+		OHPLBJKB_01519	0.25	-0.4
1,580,131	+		OHPLBJKB_01519	0.26	+1.0
1,580,136	-		OHPLBJKB_01519	0.26	+1.1
1,580,265	-		OHPLBJKB_01519	0.31	+1.4
1,580,266	+		OHPLBJKB_01519	0.31	+1.1
1,580,289	+		OHPLBJKB_01519	0.32	-0.4
1,580,345	+		OHPLBJKB_01519	0.34	+0.1
1,580,345	+		OHPLBJKB_01519	0.34	-0.2
1,580,345	+		OHPLBJKB_01519	0.34	-0.4
1,580,346	-		OHPLBJKB_01519	0.34	-0.1
1,580,391	-		OHPLBJKB_01519	0.36	-0.5
1,580,391	-		OHPLBJKB_01519	0.36	+0.3
1,580,421	+		OHPLBJKB_01519	0.37	+0.8
1,580,421	+		OHPLBJKB_01519	0.37	-1.3
1,580,421	+		OHPLBJKB_01519	0.37	+0.3
1,580,421	+		OHPLBJKB_01519	0.37	+0.3
1,580,421	+		OHPLBJKB_01519	0.37	+0.4
1,580,421	+		OHPLBJKB_01519	0.37	+0.4
1,580,422	-		OHPLBJKB_01519	0.37	+1.1
1,580,453	+		OHPLBJKB_01519	0.38	-0.7
1,580,454	-		OHPLBJKB_01519	0.38	-0.5
1,580,487	-		OHPLBJKB_01519	0.39	-0.8
1,580,592	+		OHPLBJKB_01519	0.43	-0.5
1,580,621	-		OHPLBJKB_01519	0.45	-0.2
1,580,790	-		OHPLBJKB_01519	0.51	-1.6
1,580,790	-		OHPLBJKB_01519	0.51	+1.1
1,580,846	+		OHPLBJKB_01519	0.53	+1.5
1,580,847	-		OHPLBJKB_01519	0.53	-0.3
1,580,861	+		OHPLBJKB_01519	0.54	+0.3
1,580,862	-		OHPLBJKB_01519	0.54	-0.6
1,580,888	+		OHPLBJKB_01519	0.55	-0.2
1,580,888	+		OHPLBJKB_01519	0.55	+2.1
1,580,888	+		OHPLBJKB_01519	0.55	+0.4
1,580,962	+		OHPLBJKB_01519	0.58	+1.3
1,581,003	-		OHPLBJKB_01519	0.59	-0.2
1,581,008	+		OHPLBJKB_01519	0.59	+0.1
1,581,008	+		OHPLBJKB_01519	0.59	+0.3
1,581,008	+		OHPLBJKB_01519	0.59	+0.2
1,581,009	-		OHPLBJKB_01519	0.59	-0.3
1,581,009	-		OHPLBJKB_01519	0.59	-0.6
1,581,044	+		OHPLBJKB_01519	0.61	-0.2
1,581,045	-		OHPLBJKB_01519	0.61	-0.5
1,581,080	+		OHPLBJKB_01519	0.62	+2.3
1,581,080	+		OHPLBJKB_01519	0.62	-0.2
1,581,084	+		OHPLBJKB_01519	0.62	+0.1
1,581,084	+		OHPLBJKB_01519	0.62	-1.2
1,581,084	+		OHPLBJKB_01519	0.62	-1.3
1,581,084	+		OHPLBJKB_01519	0.62	-0.6
1,581,085	-		OHPLBJKB_01519	0.62	+1.2
1,581,085	-		OHPLBJKB_01519	0.62	-1.0
1,581,085	-		OHPLBJKB_01519	0.62	-0.0
1,581,085	-		OHPLBJKB_01519	0.62	+0.2
1,581,085	-		OHPLBJKB_01519	0.62	-2.1
1,581,085	-		OHPLBJKB_01519	0.62	-0.3
1,581,085	-		OHPLBJKB_01519	0.62	-0.3
1,581,085	-		OHPLBJKB_01519	0.62	-0.7
1,581,090	+		OHPLBJKB_01519	0.63	+0.7
1,581,090	+		OHPLBJKB_01519	0.63	+0.4
1,581,090	+		OHPLBJKB_01519	0.63	+0.6
1,581,091	-		OHPLBJKB_01519	0.63	-1.2
1,581,091	-		OHPLBJKB_01519	0.63	-1.3
1,581,091	-		OHPLBJKB_01519	0.63	-0.5
1,581,091	-		OHPLBJKB_01519	0.63	+1.1
1,581,092	+		OHPLBJKB_01519	0.63	+1.1
1,581,092	+		OHPLBJKB_01519	0.63	-2.0
1,581,092	+		OHPLBJKB_01519	0.63	+0.2
1,581,093	-		OHPLBJKB_01519	0.63	+0.7
1,581,116	+		OHPLBJKB_01519	0.64	-1.3
1,581,117	-		OHPLBJKB_01519	0.64	-1.1
1,581,200	-		OHPLBJKB_01519	0.67	+0.0
1,581,200	-		OHPLBJKB_01519	0.67	-1.8
1,581,200	-		OHPLBJKB_01519	0.67	+0.8
1,581,244	+		OHPLBJKB_01519	0.69	-0.0
1,581,244	+		OHPLBJKB_01519	0.69	-0.2
1,581,287	+		OHPLBJKB_01519	0.70	+0.0
1,581,288	-		OHPLBJKB_01519	0.70	-0.0
1,581,432	-		OHPLBJKB_01519	0.76	-0.9
1,581,458	+		OHPLBJKB_01519	0.77	+0.1
1,581,458	+		OHPLBJKB_01519	0.77	+0.9
1,581,459	-		OHPLBJKB_01519	0.77	-0.6
1,581,462	-		OHPLBJKB_01519	0.77	-0.8
1,581,471	+		OHPLBJKB_01519	0.77	-0.2
1,581,471	+		OHPLBJKB_01519	0.77	-0.4
1,581,471	+		OHPLBJKB_01519	0.77	+0.3
1,581,471	+		OHPLBJKB_01519	0.77	+0.1
1,581,471	+		OHPLBJKB_01519	0.77	+0.5
1,581,471	+		OHPLBJKB_01519	0.77	+0.4
1,581,471	+		OHPLBJKB_01519	0.77	+0.4
1,581,472	-		OHPLBJKB_01519	0.77	-1.6
1,581,472	-		OHPLBJKB_01519	0.77	-0.3
1,581,472	-		OHPLBJKB_01519	0.77	+0.4
1,581,472	-		OHPLBJKB_01519	0.77	+0.6
1,581,472	-		OHPLBJKB_01519	0.77	-0.8
1,581,473	+		OHPLBJKB_01519	0.77	+0.4
1,581,474	-		OHPLBJKB_01519	0.77	+0.4
1,581,486	+		OHPLBJKB_01519	0.78	-0.0
1,581,486	+		OHPLBJKB_01519	0.78	+0.4
1,581,486	+		OHPLBJKB_01519	0.78	+0.1
1,581,516	+		OHPLBJKB_01519	0.79	+0.9
1,581,516	+		OHPLBJKB_01519	0.79	+0.7
1,581,516	+		OHPLBJKB_01519	0.79	+0.5
1,581,516	+		OHPLBJKB_01519	0.79	-0.4
1,581,516	+		OHPLBJKB_01519	0.79	+1.3
1,581,517	-		OHPLBJKB_01519	0.79	+0.0
1,581,517	-		OHPLBJKB_01519	0.79	+0.5
1,581,517	-		OHPLBJKB_01519	0.79	+2.3
1,581,517	-		OHPLBJKB_01519	0.79	-0.4
1,581,576	-		OHPLBJKB_01519	0.81	+1.5
1,581,600	+		OHPLBJKB_01519	0.82	-0.6
1,581,605	+		OHPLBJKB_01519	0.82	-0.2
1,581,605	+		OHPLBJKB_01519	0.82	-0.4
1,581,606	-		OHPLBJKB_01519	0.83	+0.7
1,581,675	+		OHPLBJKB_01519	0.85	+5.0
1,581,676	-		OHPLBJKB_01519	0.85	+0.1
1,581,715	-		OHPLBJKB_01519	0.87	-1.9
1,581,792	+		OHPLBJKB_01519	0.90	+1.1
1,581,792	+		OHPLBJKB_01519	0.90	-0.5
1,581,793	-		OHPLBJKB_01519	0.90	+0.1
1,581,793	-		OHPLBJKB_01519	0.90	+0.5
1,581,858	+				-0.6
1,581,859	-				-0.0
1,581,994	-				+1.7
1,582,107	+				-2.2
1,582,251	-				+0.1
1,582,253	+				-1.9
1,582,253	+				-0.5
1,582,254	-				-1.9
1,582,254	-				+0.2
1,582,254	-				-0.0
1,582,281	+				+0.1
1,582,282	-				-0.5
1,582,309	+				-0.8
1,582,399	+				+0.3
1,582,399	+				+0.7
1,582,406	+				-0.2
1,582,407	-				-0.4
1,582,407	-				-0.6
1,582,407	-				-0.5
1,582,407	-				+0.5
1,582,420	-				+0.5
1,582,420	-				-1.6
1,582,471	-				-1.4
1,582,471	-				-0.4
1,582,564	+		OHPLBJKB_01521	0.14	-0.6
1,582,565	-		OHPLBJKB_01521	0.14	+1.1
1,582,565	-		OHPLBJKB_01521	0.14	+0.2
1,582,599	+		OHPLBJKB_01521	0.16	-1.0
1,582,618	-		OHPLBJKB_01521	0.17	-0.3
1,582,618	-		OHPLBJKB_01521	0.17	+0.5
1,582,618	-		OHPLBJKB_01521	0.17	+0.7
1,582,620	+		OHPLBJKB_01521	0.17	-0.5
1,582,747	-		OHPLBJKB_01521	0.25	+0.5
1,582,826	+		OHPLBJKB_01521	0.29	-0.0
1,582,826	+		OHPLBJKB_01521	0.29	-0.6
1,582,827	-		OHPLBJKB_01521	0.29	-0.6
1,582,867	-		OHPLBJKB_01521	0.32	-0.5
1,582,869	+		OHPLBJKB_01521	0.32	+0.4
1,582,870	-		OHPLBJKB_01521	0.32	-0.0
1,582,870	-		OHPLBJKB_01521	0.32	-1.0