Strain Fitness in Escherichia coli ECRC100 around OKFHMN_08650

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
1,613,279	+	ddlA	OKFHMN_08635	0.89	+1.3
1,613,280	-	ddlA	OKFHMN_08635	0.89	+1.6
1,613,280	-	ddlA	OKFHMN_08635	0.89	+0.5
1,613,280	-	ddlA	OKFHMN_08635	0.89	-0.1
1,613,317	-				+0.0
1,613,394	+				+0.1
1,613,395	-				+0.0
1,613,415	+				+1.6
1,613,482	+	yaiZ	OKFHMN_08640	0.29	+1.6
1,613,561	-	yaiZ	OKFHMN_08640	0.66	+0.3
1,613,570	+	yaiZ	OKFHMN_08640	0.70	-1.2
1,613,571	-	yaiZ	OKFHMN_08640	0.71	+0.8
1,613,573	-	yaiZ	OKFHMN_08640	0.72	+0.5
1,613,573	-	yaiZ	OKFHMN_08640	0.72	-1.6
1,613,573	-	yaiZ	OKFHMN_08640	0.72	+0.1
1,613,593	-	yaiZ	OKFHMN_08640	0.81	-0.1
1,613,593	-	yaiZ	OKFHMN_08640	0.81	+0.0
1,613,593	-	yaiZ	OKFHMN_08640	0.81	+1.0
1,613,596	-	yaiZ	OKFHMN_08640	0.83	+0.0
1,613,596	-	yaiZ	OKFHMN_08640	0.83	+0.1
1,613,596	-	yaiZ	OKFHMN_08640	0.83	+0.0
1,613,596	-	yaiZ	OKFHMN_08640	0.83	-0.4
1,613,596	-	yaiZ	OKFHMN_08640	0.83	-1.6
1,613,792	+				-1.4
1,613,793	-				-0.1
1,613,841	-				+0.2
1,613,971	-	yaiY	OKFHMN_08645	0.26	-0.6
1,614,206	-				-1.5
1,614,411	-	yaiW	OKFHMN_08650	0.14	+0.4
1,614,423	-	yaiW	OKFHMN_08650	0.15	+0.0
1,614,423	-	yaiW	OKFHMN_08650	0.15	-0.1
1,614,423	-	yaiW	OKFHMN_08650	0.15	+0.5
1,614,464	-	yaiW	OKFHMN_08650	0.19	+1.2
1,614,627	+	yaiW	OKFHMN_08650	0.34	+0.2
1,614,638	+	yaiW	OKFHMN_08650	0.35	-0.2
1,614,684	-	yaiW	OKFHMN_08650	0.39	-0.1
1,614,684	-	yaiW	OKFHMN_08650	0.39	+1.2
1,614,710	+	yaiW	OKFHMN_08650	0.41	-0.4
1,614,714	+	yaiW	OKFHMN_08650	0.42	+0.3
1,614,928	-	yaiW	OKFHMN_08650	0.61	+0.4
1,614,951	+	yaiW	OKFHMN_08650	0.63	+0.8
1,615,354	+				+0.9
1,615,354	+				+1.4
1,615,355	-				+0.4
1,615,377	+				-0.6
1,615,385	-				+0.1
1,615,439	+				-0.2
1,615,440	-				-0.0
1,615,485	-				-0.3
1,615,485	-				-0.2
1,615,521	+	sbmA	OKFHMN_08655	0.13	-1.0
1,615,522	-	sbmA	OKFHMN_08655	0.13	+0.6
1,615,634	+	sbmA	OKFHMN_08655	0.22	+0.0
1,615,634	+	sbmA	OKFHMN_08655	0.22	-0.0
1,615,635	-	sbmA	OKFHMN_08655	0.22	-0.9
1,615,635	-	sbmA	OKFHMN_08655	0.22	-0.7
1,615,638	+	sbmA	OKFHMN_08655	0.22	+2.6
1,615,639	-	sbmA	OKFHMN_08655	0.22	+1.1
1,615,639	-	sbmA	OKFHMN_08655	0.22	+0.2
1,615,639	-	sbmA	OKFHMN_08655	0.22	-0.3
1,615,639	-	sbmA	OKFHMN_08655	0.22	+0.4
1,615,640	+	sbmA	OKFHMN_08655	0.22	+0.1
1,615,746	+	sbmA	OKFHMN_08655	0.31	-0.2
1,615,747	-	sbmA	OKFHMN_08655	0.31	+0.0
1,615,960	-	sbmA	OKFHMN_08655	0.49	-0.1
1,615,975	-	sbmA	OKFHMN_08655	0.50	+0.0
1,616,038	-	sbmA	OKFHMN_08655	0.55	-0.7
1,616,066	+	sbmA	OKFHMN_08655	0.57	-0.2
1,616,066	+	sbmA	OKFHMN_08655	0.57	+0.6
1,616,067	-	sbmA	OKFHMN_08655	0.57	-0.2
1,616,067	-	sbmA	OKFHMN_08655	0.57	-0.8
1,616,240	+	sbmA	OKFHMN_08655	0.72	+0.7
1,616,324	-	sbmA	OKFHMN_08655	0.78	+0.6
1,616,333	+	sbmA	OKFHMN_08655	0.79	-0.2
1,616,334	-	sbmA	OKFHMN_08655	0.79	-1.0