Strain Fitness in Escherichia coli ECRC100 around OKFHMN_08600

Experiment: Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas09
1,605,423	-	aroM	OKFHMN_08590	0.45	-0.1
1,605,491	+	aroM	OKFHMN_08590	0.55	+0.2
1,605,492	-	aroM	OKFHMN_08590	0.55	+1.2
1,605,492	-	aroM	OKFHMN_08590	0.55	-0.5
1,605,510	+	aroM	OKFHMN_08590	0.58	+0.9
1,605,515	+	aroM	OKFHMN_08590	0.58	+0.0
1,605,515	+	aroM	OKFHMN_08590	0.58	+0.2
1,605,527	-	aroM	OKFHMN_08590	0.60	+0.4
1,605,696	-	aroM	OKFHMN_08590	0.85	-0.4
1,605,707	+	aroM	OKFHMN_08590	0.87	+2.9
1,605,710	+	aroM	OKFHMN_08590	0.87	+1.0
1,605,725	-	aroM	OKFHMN_08590	0.89	-0.5
1,605,756	-				+0.4
1,605,756	-				+0.6
1,605,759	+				-0.6
1,605,867	-				-1.2
1,605,914	+				+0.5
1,606,209	-	yaiA	OKFHMN_08595	0.80	-0.4
1,606,210	+	yaiA	OKFHMN_08595	0.81	-0.4
1,606,210	+	yaiA	OKFHMN_08595	0.81	-1.2
1,606,211	-	yaiA	OKFHMN_08595	0.81	+0.3
1,606,211	-	yaiA	OKFHMN_08595	0.81	+0.1
1,606,211	-	yaiA	OKFHMN_08595	0.81	-0.3
1,606,212	+	yaiA	OKFHMN_08595	0.82	+0.0
1,606,212	+	yaiA	OKFHMN_08595	0.82	+0.6
1,606,212	+	yaiA	OKFHMN_08595	0.82	+0.2
1,606,213	-	yaiA	OKFHMN_08595	0.82	+2.0
1,606,213	-	yaiA	OKFHMN_08595	0.82	+0.8
1,606,213	-	yaiA	OKFHMN_08595	0.82	-0.1
1,606,213	-	yaiA	OKFHMN_08595	0.82	+0.0
1,606,213	-	yaiA	OKFHMN_08595	0.82	+0.8
1,606,281	-				+0.6
1,606,281	-				-0.9
1,606,281	-				+0.6
1,606,373	+	aroL	OKFHMN_08600	0.15	+0.9
1,606,377	-	aroL	OKFHMN_08600	0.15	-0.7
1,606,396	-	aroL	OKFHMN_08600	0.19	-0.5
1,607,122	+	yaiI	OKFHMN_08605	0.26	-1.8
1,607,123	-	yaiI	OKFHMN_08605	0.26	+0.0
1,607,172	+	yaiI	OKFHMN_08605	0.37	-0.3
1,607,234	+	yaiI	OKFHMN_08605	0.50	-1.1
1,607,234	+	yaiI	OKFHMN_08605	0.50	+1.6
1,607,235	-	yaiI	OKFHMN_08605	0.51	+0.2
1,607,324	-	yaiI	OKFHMN_08605	0.70	-1.3
1,607,390	-	yaiI	OKFHMN_08605	0.84	-0.4
1,607,390	-	yaiI	OKFHMN_08605	0.84	-0.4
1,607,390	-	yaiI	OKFHMN_08605	0.84	+0.3
1,607,489	+				-0.8
1,607,490	-				-0.9
1,607,527	+				-0.6
1,607,601	+				+0.2
1,607,683	+	proC	OKFHMN_08610	0.13	-1.1
1,607,683	+	proC	OKFHMN_08610	0.13	-1.2
1,607,684	-	proC	OKFHMN_08610	0.13	-1.0
1,607,686	-	proC	OKFHMN_08610	0.13	+1.6