Experiment: Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybhR and ybhQ overlap by 39 nucleotides ybhQ and ybhP are separated by 132 nucleotides ybhP and clsB overlap by 4 nucleotides
OKFHMN_06315: ybhR - putative multidrug ABC transporter permease YbhR, at 1,124,799 to 1,125,905
ybhR
OKFHMN_06320: ybhQ - Inner membrane protein YbhQ, at 1,125,867 to 1,126,277
ybhQ
OKFHMN_06325: ybhP - Uncharacterized protein YbhP, at 1,126,410 to 1,127,171
ybhP
OKFHMN_06330: clsB - cardiolipin synthase ClsB, at 1,127,168 to 1,128,409
clsB
Position (kb) 1126
1127
1128 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1125.671 kb on + strand, within ybhR at 1125.672 kb on - strand, within ybhR at 1125.827 kb on + strand at 1125.893 kb on + strand at 1125.894 kb on - strand at 1125.904 kb on - strand at 1126.037 kb on - strand, within ybhQ at 1126.136 kb on - strand, within ybhQ at 1126.136 kb on - strand, within ybhQ at 1126.176 kb on - strand, within ybhQ at 1126.240 kb on - strand at 1126.304 kb on + strand at 1126.305 kb on - strand at 1126.305 kb on - strand at 1126.308 kb on + strand at 1126.369 kb on + strand at 1126.375 kb on - strand at 1126.388 kb on - strand at 1126.637 kb on + strand, within ybhP at 1126.637 kb on + strand, within ybhP at 1126.637 kb on + strand, within ybhP at 1126.638 kb on - strand, within ybhP at 1126.673 kb on - strand, within ybhP at 1126.831 kb on + strand, within ybhP at 1126.831 kb on + strand, within ybhP at 1126.831 kb on + strand, within ybhP at 1126.832 kb on - strand, within ybhP at 1126.832 kb on - strand, within ybhP at 1126.959 kb on - strand, within ybhP at 1127.226 kb on - strand at 1127.228 kb on + strand at 1127.447 kb on + strand, within clsB at 1127.476 kb on + strand, within clsB at 1127.542 kb on + strand, within clsB at 1127.572 kb on + strand, within clsB at 1127.572 kb on + strand, within clsB at 1127.789 kb on - strand, within clsB at 1127.789 kb on - strand, within clsB at 1127.802 kb on - strand, within clsB at 1127.853 kb on - strand, within clsB at 1127.891 kb on - strand, within clsB at 1127.980 kb on + strand, within clsB at 1127.981 kb on - strand, within clsB at 1127.981 kb on - strand, within clsB at 1127.981 kb on - strand, within clsB at 1127.981 kb on - strand, within clsB at 1127.984 kb on + strand, within clsB at 1127.985 kb on - strand, within clsB at 1128.076 kb on - strand, within clsB
Per-strain Table
Position Strand Gene LocusTag Fraction Bas09 remove 1,125,671 + ybhR OKFHMN_06315 0.79 +2.4 1,125,672 - ybhR OKFHMN_06315 0.79 -0.1 1,125,827 + +1.1 1,125,893 + -0.4 1,125,894 - -0.9 1,125,904 - +0.2 1,126,037 - ybhQ OKFHMN_06320 0.41 -0.1 1,126,136 - ybhQ OKFHMN_06320 0.65 +0.4 1,126,136 - ybhQ OKFHMN_06320 0.65 +0.9 1,126,176 - ybhQ OKFHMN_06320 0.75 +0.4 1,126,240 - +0.4 1,126,304 + -0.4 1,126,305 - -0.1 1,126,305 - +1.1 1,126,308 + -1.0 1,126,369 + -1.2 1,126,375 - -0.4 1,126,388 - +0.2 1,126,637 + ybhP OKFHMN_06325 0.30 -1.1 1,126,637 + ybhP OKFHMN_06325 0.30 -2.0 1,126,637 + ybhP OKFHMN_06325 0.30 -0.1 1,126,638 - ybhP OKFHMN_06325 0.30 -0.8 1,126,673 - ybhP OKFHMN_06325 0.35 -0.3 1,126,831 + ybhP OKFHMN_06325 0.55 +0.2 1,126,831 + ybhP OKFHMN_06325 0.55 +0.6 1,126,831 + ybhP OKFHMN_06325 0.55 -0.1 1,126,832 - ybhP OKFHMN_06325 0.55 +0.0 1,126,832 - ybhP OKFHMN_06325 0.55 -0.2 1,126,959 - ybhP OKFHMN_06325 0.72 -0.7 1,127,226 - -0.6 1,127,228 + +0.9 1,127,447 + clsB OKFHMN_06330 0.22 +0.1 1,127,476 + clsB OKFHMN_06330 0.25 -0.9 1,127,542 + clsB OKFHMN_06330 0.30 -0.6 1,127,572 + clsB OKFHMN_06330 0.33 +0.6 1,127,572 + clsB OKFHMN_06330 0.33 -1.6 1,127,789 - clsB OKFHMN_06330 0.50 +0.6 1,127,789 - clsB OKFHMN_06330 0.50 +0.4 1,127,802 - clsB OKFHMN_06330 0.51 +0.0 1,127,853 - clsB OKFHMN_06330 0.55 -1.8 1,127,891 - clsB OKFHMN_06330 0.58 +1.4 1,127,980 + clsB OKFHMN_06330 0.65 +0.0 1,127,981 - clsB OKFHMN_06330 0.65 -0.3 1,127,981 - clsB OKFHMN_06330 0.65 -0.7 1,127,981 - clsB OKFHMN_06330 0.65 -0.9 1,127,981 - clsB OKFHMN_06330 0.65 +0.4 1,127,984 + clsB OKFHMN_06330 0.66 -0.6 1,127,985 - clsB OKFHMN_06330 0.66 +0.9 1,128,076 - clsB OKFHMN_06330 0.73 +1.2
Or see this region's nucleotide sequence