Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt thiC and OKGIIK_16970 are separated by 109 nucleotides OKGIIK_16970 and qor are separated by 15 nucleotides qor and ppa are separated by 309 nucleotides ppa and OKGIIK_16985 are separated by 96 nucleotides
OKGIIK_16965: thiC - phosphomethylpyrimidine synthase ThiC, at 3,722,741 to 3,724,618
thiC
OKGIIK_16970: OKGIIK_16970 - Bacterioferritin, at 3,724,728 to 3,725,324
_16970
OKGIIK_16975: qor - zinc-binding alcohol dehydrogenase family protein, at 3,725,340 to 3,726,356
qor
OKGIIK_16980: ppa - inorganic diphosphatase, at 3,726,666 to 3,727,205
ppa
OKGIIK_16985: OKGIIK_16985 - Proline dioxygenase, at 3,727,302 to 3,728,156
_16985
Position (kb)
3725
3726
3727 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3724.604 kb on + strand at 3724.604 kb on + strand at 3724.692 kb on + strand at 3724.693 kb on - strand at 3724.893 kb on + strand, within OKGIIK_16970 at 3724.893 kb on + strand, within OKGIIK_16970 at 3724.894 kb on - strand, within OKGIIK_16970 at 3724.894 kb on - strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.899 kb on + strand, within OKGIIK_16970 at 3724.900 kb on - strand, within OKGIIK_16970 at 3724.900 kb on - strand, within OKGIIK_16970 at 3724.900 kb on - strand, within OKGIIK_16970 at 3724.900 kb on - strand, within OKGIIK_16970 at 3724.905 kb on + strand, within OKGIIK_16970 at 3724.905 kb on + strand, within OKGIIK_16970 at 3724.905 kb on + strand, within OKGIIK_16970 at 3724.905 kb on + strand, within OKGIIK_16970 at 3724.906 kb on - strand, within OKGIIK_16970 at 3724.906 kb on - strand, within OKGIIK_16970 at 3724.906 kb on - strand, within OKGIIK_16970 at 3724.906 kb on - strand, within OKGIIK_16970 at 3724.906 kb on - strand, within OKGIIK_16970 at 3724.906 kb on - strand, within OKGIIK_16970 at 3724.906 kb on - strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.908 kb on + strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3724.909 kb on - strand, within OKGIIK_16970 at 3725.070 kb on + strand, within OKGIIK_16970 at 3725.071 kb on - strand, within OKGIIK_16970 at 3725.071 kb on - strand, within OKGIIK_16970 at 3725.142 kb on + strand, within OKGIIK_16970 at 3725.142 kb on + strand, within OKGIIK_16970 at 3725.143 kb on - strand, within OKGIIK_16970 at 3725.160 kb on + strand, within OKGIIK_16970 at 3725.160 kb on + strand, within OKGIIK_16970 at 3725.160 kb on + strand, within OKGIIK_16970 at 3725.160 kb on + strand, within OKGIIK_16970 at 3725.161 kb on - strand, within OKGIIK_16970 at 3725.161 kb on - strand, within OKGIIK_16970 at 3725.161 kb on - strand, within OKGIIK_16970 at 3725.161 kb on - strand, within OKGIIK_16970 at 3725.161 kb on - strand, within OKGIIK_16970 at 3725.161 kb on - strand, within OKGIIK_16970 at 3725.581 kb on + strand, within qor at 3725.581 kb on + strand, within qor at 3725.581 kb on + strand, within qor at 3725.581 kb on + strand, within qor at 3725.582 kb on - strand, within qor at 3725.582 kb on - strand, within qor at 3725.582 kb on - strand, within qor at 3725.582 kb on - strand, within qor at 3725.582 kb on - strand, within qor at 3725.582 kb on - strand, within qor at 3725.582 kb on - strand, within qor at 3725.582 kb on - strand, within qor at 3725.671 kb on + strand, within qor at 3725.672 kb on - strand, within qor at 3725.672 kb on - strand, within qor at 3725.672 kb on - strand, within qor at 3725.672 kb on - strand, within qor at 3726.091 kb on + strand, within qor at 3726.092 kb on - strand, within qor at 3726.092 kb on - strand, within qor at 3726.092 kb on - strand, within qor at 3726.092 kb on - strand, within qor at 3726.092 kb on - strand, within qor at 3726.094 kb on + strand, within qor at 3726.094 kb on + strand, within qor at 3726.094 kb on + strand, within qor at 3726.094 kb on + strand, within qor at 3726.094 kb on + strand, within qor at 3726.094 kb on + strand, within qor at 3726.094 kb on + strand, within qor at 3726.094 kb on + strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.095 kb on - strand, within qor at 3726.163 kb on + strand, within qor at 3726.164 kb on - strand, within qor at 3726.331 kb on + strand at 3726.332 kb on - strand at 3726.332 kb on - strand at 3726.332 kb on - strand at 3726.447 kb on - strand at 3726.536 kb on + strand at 3726.536 kb on + strand at 3726.536 kb on + strand at 3726.536 kb on + strand at 3726.537 kb on - strand at 3726.537 kb on - strand at 3726.537 kb on - strand at 3726.537 kb on - strand at 3726.537 kb on - strand at 3726.537 kb on - strand at 3726.537 kb on - strand at 3726.537 kb on - strand at 3727.251 kb on - strand at 3727.324 kb on + strand at 3727.324 kb on + strand at 3727.324 kb on + strand at 3727.324 kb on + strand at 3727.324 kb on + strand at 3727.325 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,724,604 + +1.1 3,724,604 + +0.3 3,724,692 + -0.3 3,724,693 - +1.3 3,724,893 + OKGIIK_16970 0.28 +0.5 3,724,893 + OKGIIK_16970 0.28 -0.3 3,724,894 - OKGIIK_16970 0.28 -1.3 3,724,894 - OKGIIK_16970 0.28 -1.7 3,724,899 + OKGIIK_16970 0.29 +1.1 3,724,899 + OKGIIK_16970 0.29 +0.1 3,724,899 + OKGIIK_16970 0.29 -1.6 3,724,899 + OKGIIK_16970 0.29 -0.1 3,724,899 + OKGIIK_16970 0.29 -0.4 3,724,899 + OKGIIK_16970 0.29 -0.1 3,724,899 + OKGIIK_16970 0.29 -0.7 3,724,899 + OKGIIK_16970 0.29 -0.7 3,724,899 + OKGIIK_16970 0.29 -0.8 3,724,899 + OKGIIK_16970 0.29 -0.4 3,724,900 - OKGIIK_16970 0.29 +1.5 3,724,900 - OKGIIK_16970 0.29 -0.3 3,724,900 - OKGIIK_16970 0.29 -0.9 3,724,900 - OKGIIK_16970 0.29 -0.5 3,724,905 + OKGIIK_16970 0.30 +0.9 3,724,905 + OKGIIK_16970 0.30 +0.7 3,724,905 + OKGIIK_16970 0.30 -0.1 3,724,905 + OKGIIK_16970 0.30 +1.4 3,724,906 - OKGIIK_16970 0.30 -0.0 3,724,906 - OKGIIK_16970 0.30 -2.3 3,724,906 - OKGIIK_16970 0.30 +0.9 3,724,906 - OKGIIK_16970 0.30 -1.4 3,724,906 - OKGIIK_16970 0.30 -0.7 3,724,906 - OKGIIK_16970 0.30 -1.5 3,724,906 - OKGIIK_16970 0.30 +0.1 3,724,908 + OKGIIK_16970 0.30 -0.2 3,724,908 + OKGIIK_16970 0.30 -1.0 3,724,908 + OKGIIK_16970 0.30 +0.0 3,724,908 + OKGIIK_16970 0.30 +1.7 3,724,908 + OKGIIK_16970 0.30 -0.1 3,724,908 + OKGIIK_16970 0.30 +1.1 3,724,908 + OKGIIK_16970 0.30 -0.4 3,724,908 + OKGIIK_16970 0.30 -1.3 3,724,908 + OKGIIK_16970 0.30 -0.2 3,724,908 + OKGIIK_16970 0.30 +0.9 3,724,908 + OKGIIK_16970 0.30 +0.3 3,724,908 + OKGIIK_16970 0.30 -0.3 3,724,908 + OKGIIK_16970 0.30 -0.3 3,724,908 + OKGIIK_16970 0.30 -0.7 3,724,908 + OKGIIK_16970 0.30 -2.9 3,724,908 + OKGIIK_16970 0.30 -2.5 3,724,908 + OKGIIK_16970 0.30 +0.3 3,724,908 + OKGIIK_16970 0.30 -0.5 3,724,908 + OKGIIK_16970 0.30 -0.7 3,724,908 + OKGIIK_16970 0.30 -0.0 3,724,908 + OKGIIK_16970 0.30 +0.2 3,724,908 + OKGIIK_16970 0.30 -1.4 3,724,908 + OKGIIK_16970 0.30 +0.3 3,724,908 + OKGIIK_16970 0.30 -0.7 3,724,908 + OKGIIK_16970 0.30 +1.3 3,724,908 + OKGIIK_16970 0.30 +0.6 3,724,908 + OKGIIK_16970 0.30 -0.8 3,724,908 + OKGIIK_16970 0.30 +0.2 3,724,909 - OKGIIK_16970 0.30 -0.1 3,724,909 - OKGIIK_16970 0.30 +0.2 3,724,909 - OKGIIK_16970 0.30 -1.1 3,724,909 - OKGIIK_16970 0.30 -1.3 3,724,909 - OKGIIK_16970 0.30 -0.8 3,724,909 - OKGIIK_16970 0.30 -0.5 3,724,909 - OKGIIK_16970 0.30 +1.3 3,724,909 - OKGIIK_16970 0.30 +0.4 3,724,909 - OKGIIK_16970 0.30 -0.3 3,724,909 - OKGIIK_16970 0.30 -0.2 3,724,909 - OKGIIK_16970 0.30 +0.1 3,724,909 - OKGIIK_16970 0.30 -0.7 3,724,909 - OKGIIK_16970 0.30 -1.9 3,724,909 - OKGIIK_16970 0.30 -0.3 3,724,909 - OKGIIK_16970 0.30 -0.9 3,724,909 - OKGIIK_16970 0.30 -0.6 3,724,909 - OKGIIK_16970 0.30 -0.6 3,724,909 - OKGIIK_16970 0.30 -0.0 3,724,909 - OKGIIK_16970 0.30 -0.0 3,724,909 - OKGIIK_16970 0.30 -0.9 3,724,909 - OKGIIK_16970 0.30 -0.3 3,724,909 - OKGIIK_16970 0.30 -0.5 3,725,070 + OKGIIK_16970 0.57 +0.2 3,725,071 - OKGIIK_16970 0.57 +0.1 3,725,071 - OKGIIK_16970 0.57 -1.5 3,725,142 + OKGIIK_16970 0.69 -0.8 3,725,142 + OKGIIK_16970 0.69 +0.2 3,725,143 - OKGIIK_16970 0.70 +0.7 3,725,160 + OKGIIK_16970 0.72 -1.0 3,725,160 + OKGIIK_16970 0.72 -0.1 3,725,160 + OKGIIK_16970 0.72 +0.5 3,725,160 + OKGIIK_16970 0.72 +1.3 3,725,161 - OKGIIK_16970 0.73 -2.0 3,725,161 - OKGIIK_16970 0.73 -2.7 3,725,161 - OKGIIK_16970 0.73 +0.4 3,725,161 - OKGIIK_16970 0.73 -0.5 3,725,161 - OKGIIK_16970 0.73 +0.1 3,725,161 - OKGIIK_16970 0.73 +0.2 3,725,581 + qor OKGIIK_16975 0.24 -0.7 3,725,581 + qor OKGIIK_16975 0.24 -0.2 3,725,581 + qor OKGIIK_16975 0.24 -1.3 3,725,581 + qor OKGIIK_16975 0.24 -0.4 3,725,582 - qor OKGIIK_16975 0.24 -0.9 3,725,582 - qor OKGIIK_16975 0.24 +1.2 3,725,582 - qor OKGIIK_16975 0.24 -0.6 3,725,582 - qor OKGIIK_16975 0.24 -1.5 3,725,582 - qor OKGIIK_16975 0.24 -0.4 3,725,582 - qor OKGIIK_16975 0.24 -0.4 3,725,582 - qor OKGIIK_16975 0.24 -1.5 3,725,582 - qor OKGIIK_16975 0.24 -0.7 3,725,671 + qor OKGIIK_16975 0.33 -0.7 3,725,672 - qor OKGIIK_16975 0.33 -0.3 3,725,672 - qor OKGIIK_16975 0.33 -1.7 3,725,672 - qor OKGIIK_16975 0.33 -1.8 3,725,672 - qor OKGIIK_16975 0.33 -0.4 3,726,091 + qor OKGIIK_16975 0.74 +0.1 3,726,092 - qor OKGIIK_16975 0.74 -1.0 3,726,092 - qor OKGIIK_16975 0.74 +1.3 3,726,092 - qor OKGIIK_16975 0.74 +0.2 3,726,092 - qor OKGIIK_16975 0.74 -0.5 3,726,092 - qor OKGIIK_16975 0.74 -0.6 3,726,094 + qor OKGIIK_16975 0.74 -0.1 3,726,094 + qor OKGIIK_16975 0.74 -1.0 3,726,094 + qor OKGIIK_16975 0.74 -1.0 3,726,094 + qor OKGIIK_16975 0.74 +0.7 3,726,094 + qor OKGIIK_16975 0.74 +0.4 3,726,094 + qor OKGIIK_16975 0.74 -0.3 3,726,094 + qor OKGIIK_16975 0.74 +0.3 3,726,094 + qor OKGIIK_16975 0.74 -0.8 3,726,095 - qor OKGIIK_16975 0.74 -0.7 3,726,095 - qor OKGIIK_16975 0.74 +1.5 3,726,095 - qor OKGIIK_16975 0.74 -2.7 3,726,095 - qor OKGIIK_16975 0.74 +0.6 3,726,095 - qor OKGIIK_16975 0.74 +1.0 3,726,095 - qor OKGIIK_16975 0.74 -1.7 3,726,095 - qor OKGIIK_16975 0.74 -0.7 3,726,095 - qor OKGIIK_16975 0.74 +0.3 3,726,095 - qor OKGIIK_16975 0.74 -2.5 3,726,095 - qor OKGIIK_16975 0.74 -2.1 3,726,095 - qor OKGIIK_16975 0.74 -0.6 3,726,095 - qor OKGIIK_16975 0.74 -0.9 3,726,163 + qor OKGIIK_16975 0.81 -0.3 3,726,164 - qor OKGIIK_16975 0.81 +0.3 3,726,331 + +0.2 3,726,332 - +0.9 3,726,332 - -1.7 3,726,332 - +0.4 3,726,447 - -0.5 3,726,536 + -0.0 3,726,536 + +0.8 3,726,536 + +0.0 3,726,536 + -1.0 3,726,537 - +0.5 3,726,537 - -0.9 3,726,537 - -1.0 3,726,537 - -0.4 3,726,537 - -0.3 3,726,537 - -1.8 3,726,537 - -0.3 3,726,537 - -0.0 3,727,251 - -1.3 3,727,324 + +0.1 3,727,324 + +0.5 3,727,324 + -0.2 3,727,324 + -2.0 3,727,324 + +1.1 3,727,325 - -0.6
Or see this region's nucleotide sequence