Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt arfB and OKGIIK_13280 overlap by 4 nucleotides OKGIIK_13280 and OKGIIK_13285 are separated by 28 nucleotides OKGIIK_13285 and wcaG are separated by 258 nucleotides
OKGIIK_13275: arfB - aminoacyl-tRNA hydrolase, at 2,865,063 to 2,865,485
arfB
OKGIIK_13280: OKGIIK_13280 - Acyltransferase, at 2,865,482 to 2,866,078
_13280
OKGIIK_13285: OKGIIK_13285 - LysE type translocator, at 2,866,107 to 2,866,736
_13285
OKGIIK_13290: wcaG - nucleoside-diphosphate sugar epimerase, at 2,866,995 to 2,868,011
wcaG
Position (kb)
2866
2867 Strain fitness (log2 ratio)
-2
-1
0
1 at 2865.712 kb on + strand, within OKGIIK_13280 at 2865.712 kb on + strand, within OKGIIK_13280 at 2865.712 kb on + strand, within OKGIIK_13280 at 2865.712 kb on + strand, within OKGIIK_13280 at 2865.712 kb on + strand, within OKGIIK_13280 at 2865.713 kb on - strand, within OKGIIK_13280 at 2865.934 kb on - strand, within OKGIIK_13280 at 2865.960 kb on - strand, within OKGIIK_13280 at 2866.043 kb on + strand at 2866.043 kb on + strand at 2866.043 kb on + strand at 2866.043 kb on + strand at 2866.043 kb on + strand at 2866.043 kb on + strand at 2866.043 kb on + strand at 2866.043 kb on + strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.044 kb on - strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.089 kb on + strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.090 kb on - strand at 2866.125 kb on + strand at 2866.125 kb on + strand at 2866.125 kb on + strand at 2866.125 kb on + strand at 2866.178 kb on + strand, within OKGIIK_13285 at 2866.178 kb on + strand, within OKGIIK_13285 at 2866.178 kb on + strand, within OKGIIK_13285 at 2866.178 kb on + strand, within OKGIIK_13285 at 2866.178 kb on + strand, within OKGIIK_13285 at 2866.178 kb on + strand, within OKGIIK_13285 at 2866.178 kb on + strand, within OKGIIK_13285 at 2866.179 kb on - strand, within OKGIIK_13285 at 2866.179 kb on - strand, within OKGIIK_13285 at 2866.179 kb on - strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.185 kb on + strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.186 kb on - strand, within OKGIIK_13285 at 2866.283 kb on - strand, within OKGIIK_13285 at 2866.283 kb on - strand, within OKGIIK_13285 at 2866.283 kb on - strand, within OKGIIK_13285 at 2866.325 kb on + strand, within OKGIIK_13285 at 2866.326 kb on - strand, within OKGIIK_13285 at 2866.338 kb on + strand, within OKGIIK_13285 at 2866.338 kb on + strand, within OKGIIK_13285 at 2866.339 kb on - strand, within OKGIIK_13285 at 2866.339 kb on - strand, within OKGIIK_13285 at 2866.339 kb on - strand, within OKGIIK_13285 at 2866.339 kb on - strand, within OKGIIK_13285 at 2866.339 kb on - strand, within OKGIIK_13285 at 2866.339 kb on - strand, within OKGIIK_13285 at 2866.353 kb on + strand, within OKGIIK_13285 at 2866.483 kb on + strand, within OKGIIK_13285 at 2866.483 kb on + strand, within OKGIIK_13285 at 2866.483 kb on + strand, within OKGIIK_13285 at 2866.484 kb on - strand, within OKGIIK_13285 at 2866.484 kb on - strand, within OKGIIK_13285 at 2866.484 kb on - strand, within OKGIIK_13285 at 2866.494 kb on + strand, within OKGIIK_13285 at 2866.494 kb on + strand, within OKGIIK_13285 at 2866.494 kb on + strand, within OKGIIK_13285 at 2866.494 kb on + strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.495 kb on - strand, within OKGIIK_13285 at 2866.558 kb on + strand, within OKGIIK_13285 at 2866.559 kb on - strand, within OKGIIK_13285 at 2866.559 kb on - strand, within OKGIIK_13285 at 2866.775 kb on - strand at 2866.866 kb on + strand at 2866.866 kb on + strand at 2866.867 kb on - strand at 2866.867 kb on - strand at 2866.867 kb on - strand at 2866.867 kb on - strand at 2866.877 kb on + strand at 2866.878 kb on - strand at 2866.878 kb on - strand at 2866.878 kb on - strand at 2866.906 kb on + strand at 2866.906 kb on + strand at 2866.907 kb on - strand at 2866.907 kb on - strand at 2866.913 kb on - strand at 2866.913 kb on - strand at 2866.926 kb on + strand at 2866.926 kb on + strand at 2866.926 kb on + strand at 2866.926 kb on + strand at 2866.926 kb on + strand at 2866.927 kb on - strand at 2866.927 kb on - strand at 2866.927 kb on - strand at 2866.950 kb on + strand at 2866.950 kb on + strand at 2866.950 kb on + strand at 2866.950 kb on + strand at 2866.950 kb on + strand at 2866.950 kb on + strand at 2866.951 kb on - strand at 2867.214 kb on + strand, within wcaG at 2867.214 kb on + strand, within wcaG at 2867.214 kb on + strand, within wcaG at 2867.214 kb on + strand, within wcaG at 2867.214 kb on + strand, within wcaG at 2867.215 kb on - strand, within wcaG at 2867.215 kb on - strand, within wcaG at 2867.215 kb on - strand, within wcaG at 2867.241 kb on + strand, within wcaG at 2867.241 kb on + strand, within wcaG at 2867.241 kb on + strand, within wcaG at 2867.242 kb on - strand, within wcaG at 2867.367 kb on + strand, within wcaG at 2867.367 kb on + strand, within wcaG at 2867.367 kb on + strand, within wcaG at 2867.445 kb on + strand, within wcaG at 2867.445 kb on + strand, within wcaG at 2867.445 kb on + strand, within wcaG at 2867.446 kb on - strand, within wcaG at 2867.446 kb on - strand, within wcaG at 2867.446 kb on - strand, within wcaG at 2867.487 kb on + strand, within wcaG at 2867.487 kb on + strand, within wcaG at 2867.487 kb on + strand, within wcaG at 2867.487 kb on + strand, within wcaG at 2867.487 kb on + strand, within wcaG at 2867.488 kb on - strand, within wcaG at 2867.488 kb on - strand, within wcaG at 2867.488 kb on - strand, within wcaG at 2867.562 kb on + strand, within wcaG at 2867.600 kb on - strand, within wcaG at 2867.622 kb on + strand, within wcaG at 2867.622 kb on + strand, within wcaG at 2867.622 kb on + strand, within wcaG at 2867.623 kb on - strand, within wcaG at 2867.623 kb on - strand, within wcaG at 2867.623 kb on - strand, within wcaG at 2867.623 kb on - strand, within wcaG
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,865,712 + OKGIIK_13280 0.39 +0.4 2,865,712 + OKGIIK_13280 0.39 -0.6 2,865,712 + OKGIIK_13280 0.39 -1.5 2,865,712 + OKGIIK_13280 0.39 -1.8 2,865,712 + OKGIIK_13280 0.39 +0.3 2,865,713 - OKGIIK_13280 0.39 -0.5 2,865,934 - OKGIIK_13280 0.76 -1.5 2,865,960 - OKGIIK_13280 0.80 +0.7 2,866,043 + -0.9 2,866,043 + +1.4 2,866,043 + +1.4 2,866,043 + -0.4 2,866,043 + -0.6 2,866,043 + -1.2 2,866,043 + -1.6 2,866,043 + -1.4 2,866,044 - +0.5 2,866,044 - +0.1 2,866,044 - -0.9 2,866,044 - -1.2 2,866,044 - -0.2 2,866,044 - -0.9 2,866,044 - -0.3 2,866,044 - -0.2 2,866,044 - -0.6 2,866,044 - -1.2 2,866,044 - -0.9 2,866,044 - -0.1 2,866,089 + +0.6 2,866,089 + -1.6 2,866,089 + -1.9 2,866,089 + +1.5 2,866,089 + -0.3 2,866,089 + -1.2 2,866,089 + +0.2 2,866,089 + -0.5 2,866,089 + +1.6 2,866,089 + -0.3 2,866,089 + -1.4 2,866,089 + +0.1 2,866,089 + +0.4 2,866,089 + -0.9 2,866,089 + -0.0 2,866,089 + +0.1 2,866,089 + -1.4 2,866,089 + +0.2 2,866,089 + -1.2 2,866,090 - -0.9 2,866,090 - +0.1 2,866,090 - -0.2 2,866,090 - -1.2 2,866,090 - -0.9 2,866,090 - +0.4 2,866,090 - +0.4 2,866,090 - -0.3 2,866,090 - -0.3 2,866,090 - -0.1 2,866,090 - -0.1 2,866,090 - +1.1 2,866,090 - -1.2 2,866,090 - +1.2 2,866,090 - -0.9 2,866,090 - +1.7 2,866,090 - -0.2 2,866,090 - -0.2 2,866,090 - -0.0 2,866,125 + -1.6 2,866,125 + +1.5 2,866,125 + +0.5 2,866,125 + -1.1 2,866,178 + OKGIIK_13285 0.11 +1.4 2,866,178 + OKGIIK_13285 0.11 +0.9 2,866,178 + OKGIIK_13285 0.11 -0.6 2,866,178 + OKGIIK_13285 0.11 +0.4 2,866,178 + OKGIIK_13285 0.11 -1.2 2,866,178 + OKGIIK_13285 0.11 -1.8 2,866,178 + OKGIIK_13285 0.11 -0.6 2,866,179 - OKGIIK_13285 0.11 -0.9 2,866,179 - OKGIIK_13285 0.11 +1.4 2,866,179 - OKGIIK_13285 0.11 -1.0 2,866,185 + OKGIIK_13285 0.12 -0.6 2,866,185 + OKGIIK_13285 0.12 -0.5 2,866,185 + OKGIIK_13285 0.12 -1.5 2,866,185 + OKGIIK_13285 0.12 +0.4 2,866,185 + OKGIIK_13285 0.12 +1.0 2,866,185 + OKGIIK_13285 0.12 +1.4 2,866,185 + OKGIIK_13285 0.12 -0.2 2,866,185 + OKGIIK_13285 0.12 -0.0 2,866,185 + OKGIIK_13285 0.12 +0.4 2,866,185 + OKGIIK_13285 0.12 -0.0 2,866,185 + OKGIIK_13285 0.12 +0.4 2,866,185 + OKGIIK_13285 0.12 +0.3 2,866,185 + OKGIIK_13285 0.12 -0.6 2,866,185 + OKGIIK_13285 0.12 +0.3 2,866,185 + OKGIIK_13285 0.12 +0.3 2,866,185 + OKGIIK_13285 0.12 -0.9 2,866,185 + OKGIIK_13285 0.12 +0.8 2,866,186 - OKGIIK_13285 0.13 +0.4 2,866,186 - OKGIIK_13285 0.13 +0.5 2,866,186 - OKGIIK_13285 0.13 -0.3 2,866,186 - OKGIIK_13285 0.13 +0.7 2,866,186 - OKGIIK_13285 0.13 +0.9 2,866,186 - OKGIIK_13285 0.13 -0.9 2,866,186 - OKGIIK_13285 0.13 -1.9 2,866,186 - OKGIIK_13285 0.13 -1.9 2,866,186 - OKGIIK_13285 0.13 -0.3 2,866,186 - OKGIIK_13285 0.13 +0.1 2,866,283 - OKGIIK_13285 0.28 +0.2 2,866,283 - OKGIIK_13285 0.28 -0.6 2,866,283 - OKGIIK_13285 0.28 -0.2 2,866,325 + OKGIIK_13285 0.35 +0.1 2,866,326 - OKGIIK_13285 0.35 -0.9 2,866,338 + OKGIIK_13285 0.37 +0.8 2,866,338 + OKGIIK_13285 0.37 -0.1 2,866,339 - OKGIIK_13285 0.37 -1.1 2,866,339 - OKGIIK_13285 0.37 +0.2 2,866,339 - OKGIIK_13285 0.37 +0.4 2,866,339 - OKGIIK_13285 0.37 -0.3 2,866,339 - OKGIIK_13285 0.37 +0.3 2,866,339 - OKGIIK_13285 0.37 -1.2 2,866,353 + OKGIIK_13285 0.39 -0.5 2,866,483 + OKGIIK_13285 0.60 -0.3 2,866,483 + OKGIIK_13285 0.60 +0.4 2,866,483 + OKGIIK_13285 0.60 +0.6 2,866,484 - OKGIIK_13285 0.60 +0.4 2,866,484 - OKGIIK_13285 0.60 -1.6 2,866,484 - OKGIIK_13285 0.60 -1.6 2,866,494 + OKGIIK_13285 0.61 -1.3 2,866,494 + OKGIIK_13285 0.61 -1.4 2,866,494 + OKGIIK_13285 0.61 +0.1 2,866,494 + OKGIIK_13285 0.61 -0.3 2,866,495 - OKGIIK_13285 0.62 -0.7 2,866,495 - OKGIIK_13285 0.62 -0.4 2,866,495 - OKGIIK_13285 0.62 +1.4 2,866,495 - OKGIIK_13285 0.62 +0.8 2,866,495 - OKGIIK_13285 0.62 -1.8 2,866,495 - OKGIIK_13285 0.62 +0.4 2,866,495 - OKGIIK_13285 0.62 +0.9 2,866,495 - OKGIIK_13285 0.62 -1.1 2,866,495 - OKGIIK_13285 0.62 -0.6 2,866,558 + OKGIIK_13285 0.72 +0.7 2,866,559 - OKGIIK_13285 0.72 +1.0 2,866,559 - OKGIIK_13285 0.72 -0.7 2,866,775 - -0.4 2,866,866 + -0.3 2,866,866 + +0.7 2,866,867 - +0.3 2,866,867 - -1.3 2,866,867 - +0.4 2,866,867 - +1.1 2,866,877 + -0.4 2,866,878 - -0.0 2,866,878 - -0.0 2,866,878 - +0.2 2,866,906 + -0.6 2,866,906 + -2.4 2,866,907 - +0.8 2,866,907 - -0.6 2,866,913 - -0.4 2,866,913 - -0.5 2,866,926 + -0.4 2,866,926 + -0.4 2,866,926 + +0.7 2,866,926 + -0.5 2,866,926 + -0.9 2,866,927 - +0.9 2,866,927 - +0.1 2,866,927 - +0.7 2,866,950 + -0.9 2,866,950 + -0.3 2,866,950 + -1.0 2,866,950 + -0.6 2,866,950 + +0.7 2,866,950 + -0.6 2,866,951 - +0.9 2,867,214 + wcaG OKGIIK_13290 0.22 -0.2 2,867,214 + wcaG OKGIIK_13290 0.22 -1.1 2,867,214 + wcaG OKGIIK_13290 0.22 -0.2 2,867,214 + wcaG OKGIIK_13290 0.22 -0.0 2,867,214 + wcaG OKGIIK_13290 0.22 -0.6 2,867,215 - wcaG OKGIIK_13290 0.22 -0.3 2,867,215 - wcaG OKGIIK_13290 0.22 +0.4 2,867,215 - wcaG OKGIIK_13290 0.22 -1.9 2,867,241 + wcaG OKGIIK_13290 0.24 +0.2 2,867,241 + wcaG OKGIIK_13290 0.24 +0.7 2,867,241 + wcaG OKGIIK_13290 0.24 +1.0 2,867,242 - wcaG OKGIIK_13290 0.24 +0.4 2,867,367 + wcaG OKGIIK_13290 0.37 -0.6 2,867,367 + wcaG OKGIIK_13290 0.37 -0.5 2,867,367 + wcaG OKGIIK_13290 0.37 +0.2 2,867,445 + wcaG OKGIIK_13290 0.44 +0.4 2,867,445 + wcaG OKGIIK_13290 0.44 -0.1 2,867,445 + wcaG OKGIIK_13290 0.44 -0.2 2,867,446 - wcaG OKGIIK_13290 0.44 -1.5 2,867,446 - wcaG OKGIIK_13290 0.44 +0.4 2,867,446 - wcaG OKGIIK_13290 0.44 -0.7 2,867,487 + wcaG OKGIIK_13290 0.48 -0.9 2,867,487 + wcaG OKGIIK_13290 0.48 -1.6 2,867,487 + wcaG OKGIIK_13290 0.48 -1.1 2,867,487 + wcaG OKGIIK_13290 0.48 -0.1 2,867,487 + wcaG OKGIIK_13290 0.48 +0.2 2,867,488 - wcaG OKGIIK_13290 0.48 -0.0 2,867,488 - wcaG OKGIIK_13290 0.48 -0.9 2,867,488 - wcaG OKGIIK_13290 0.48 -1.2 2,867,562 + wcaG OKGIIK_13290 0.56 +0.4 2,867,600 - wcaG OKGIIK_13290 0.59 -1.8 2,867,622 + wcaG OKGIIK_13290 0.62 -1.1 2,867,622 + wcaG OKGIIK_13290 0.62 +0.4 2,867,622 + wcaG OKGIIK_13290 0.62 -0.0 2,867,623 - wcaG OKGIIK_13290 0.62 -0.7 2,867,623 - wcaG OKGIIK_13290 0.62 +1.4 2,867,623 - wcaG OKGIIK_13290 0.62 -0.4 2,867,623 - wcaG OKGIIK_13290 0.62 +0.3
Or see this region's nucleotide sequence