Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07770

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_07765 and OKGIIK_07770 are separated by 34 nucleotidesOKGIIK_07770 and OKGIIK_07775 are separated by 385 nucleotides OKGIIK_07765: OKGIIK_07765 - zinc-binding dehydrogenase, at 1,720,997 to 1,722,049 _07765 OKGIIK_07770: OKGIIK_07770 - Cupin, at 1,722,084 to 1,722,491 _07770 OKGIIK_07775: OKGIIK_07775 - IS110 family transposase, at 1,722,877 to 1,723,845 _07775 Position (kb) 1722 1723Strain fitness (log2 ratio) -2 -1 0 1 2at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.286 kb on + strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.287 kb on - strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.448 kb on + strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.449 kb on - strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.556 kb on + strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.557 kb on - strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.706 kb on + strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.707 kb on - strand, within OKGIIK_07765at 1721.733 kb on + strand, within OKGIIK_07765at 1721.733 kb on + strand, within OKGIIK_07765at 1721.733 kb on + strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.734 kb on - strand, within OKGIIK_07765at 1721.810 kb on + strand, within OKGIIK_07765at 1721.883 kb on + strand, within OKGIIK_07765at 1721.883 kb on + strand, within OKGIIK_07765at 1721.883 kb on + strand, within OKGIIK_07765at 1721.914 kb on + strand, within OKGIIK_07765at 1721.914 kb on + strand, within OKGIIK_07765at 1721.914 kb on + strand, within OKGIIK_07765at 1721.915 kb on - strand, within OKGIIK_07765at 1721.915 kb on - strand, within OKGIIK_07765at 1721.915 kb on - strand, within OKGIIK_07765at 1722.034 kb on - strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.106 kb on + strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.107 kb on - strandat 1722.332 kb on + strand, within OKGIIK_07770at 1722.332 kb on + strand, within OKGIIK_07770at 1722.332 kb on + strand, within OKGIIK_07770at 1722.333 kb on - strand, within OKGIIK_07770at 1722.333 kb on - strand, within OKGIIK_07770at 1722.333 kb on - strand, within OKGIIK_07770at 1722.333 kb on - strand, within OKGIIK_07770at 1722.333 kb on - strand, within OKGIIK_07770at 1722.333 kb on - strand, within OKGIIK_07770at 1722.439 kb on + strand, within OKGIIK_07770at 1722.439 kb on + strand, within OKGIIK_07770at 1722.439 kb on + strand, within OKGIIK_07770at 1722.439 kb on + strand, within OKGIIK_07770at 1722.439 kb on + strand, within OKGIIK_07770at 1722.439 kb on + strand, within OKGIIK_07770at 1722.439 kb on + strand, within OKGIIK_07770at 1722.440 kb on - strand, within OKGIIK_07770at 1722.440 kb on - strand, within OKGIIK_07770at 1722.440 kb on - strand, within OKGIIK_07770at 1722.440 kb on - strand, within OKGIIK_07770at 1722.485 kb on + strandat 1722.486 kb on - strandat 1722.486 kb on - strandat 1722.521 kb on - strandat 1722.595 kb on - strandat 1722.595 kb on - strandat 1722.595 kb on - strandat 1722.595 kb on - strandat 1722.595 kb on - strandat 1722.666 kb on + strandat 1722.666 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,721,286 + OKGIIK_07765 0.27 +1.1
1,721,286 + OKGIIK_07765 0.27 +0.8
1,721,286 + OKGIIK_07765 0.27 +0.1
1,721,286 + OKGIIK_07765 0.27 +1.0
1,721,286 + OKGIIK_07765 0.27 +0.1
1,721,286 + OKGIIK_07765 0.27 -0.0
1,721,286 + OKGIIK_07765 0.27 -0.1
1,721,286 + OKGIIK_07765 0.27 +0.9
1,721,286 + OKGIIK_07765 0.27 +0.4
1,721,286 + OKGIIK_07765 0.27 -0.3
1,721,286 + OKGIIK_07765 0.27 +1.1
1,721,286 + OKGIIK_07765 0.27 -0.7
1,721,286 + OKGIIK_07765 0.27 +0.4
1,721,286 + OKGIIK_07765 0.27 -1.9
1,721,286 + OKGIIK_07765 0.27 -2.5
1,721,286 + OKGIIK_07765 0.27 +0.8
1,721,287 - OKGIIK_07765 0.28 +0.4
1,721,287 - OKGIIK_07765 0.28 +0.6
1,721,287 - OKGIIK_07765 0.28 -0.0
1,721,287 - OKGIIK_07765 0.28 +1.7
1,721,287 - OKGIIK_07765 0.28 +0.3
1,721,287 - OKGIIK_07765 0.28 +0.7
1,721,287 - OKGIIK_07765 0.28 -1.2
1,721,287 - OKGIIK_07765 0.28 -0.6
1,721,287 - OKGIIK_07765 0.28 -1.4
1,721,287 - OKGIIK_07765 0.28 +0.0
1,721,287 - OKGIIK_07765 0.28 -0.7
1,721,448 + OKGIIK_07765 0.43 +0.0
1,721,448 + OKGIIK_07765 0.43 +0.6
1,721,448 + OKGIIK_07765 0.43 +1.0
1,721,448 + OKGIIK_07765 0.43 -0.1
1,721,448 + OKGIIK_07765 0.43 +1.2
1,721,448 + OKGIIK_07765 0.43 -0.6
1,721,448 + OKGIIK_07765 0.43 -0.5
1,721,448 + OKGIIK_07765 0.43 +2.2
1,721,449 - OKGIIK_07765 0.43 -0.0
1,721,449 - OKGIIK_07765 0.43 -0.3
1,721,449 - OKGIIK_07765 0.43 -0.6
1,721,449 - OKGIIK_07765 0.43 +0.1
1,721,449 - OKGIIK_07765 0.43 +0.5
1,721,449 - OKGIIK_07765 0.43 +0.9
1,721,449 - OKGIIK_07765 0.43 +0.1
1,721,449 - OKGIIK_07765 0.43 +2.0
1,721,556 + OKGIIK_07765 0.53 -0.9
1,721,556 + OKGIIK_07765 0.53 -0.4
1,721,556 + OKGIIK_07765 0.53 -1.5
1,721,556 + OKGIIK_07765 0.53 -0.3
1,721,556 + OKGIIK_07765 0.53 +1.0
1,721,556 + OKGIIK_07765 0.53 +1.1
1,721,557 - OKGIIK_07765 0.53 -0.4
1,721,557 - OKGIIK_07765 0.53 +0.8
1,721,557 - OKGIIK_07765 0.53 +1.2
1,721,557 - OKGIIK_07765 0.53 -0.3
1,721,557 - OKGIIK_07765 0.53 +0.1
1,721,557 - OKGIIK_07765 0.53 +0.7
1,721,557 - OKGIIK_07765 0.53 +0.1
1,721,557 - OKGIIK_07765 0.53 -1.5
1,721,557 - OKGIIK_07765 0.53 +0.0
1,721,706 + OKGIIK_07765 0.67 +0.2
1,721,706 + OKGIIK_07765 0.67 -0.6
1,721,706 + OKGIIK_07765 0.67 +0.9
1,721,706 + OKGIIK_07765 0.67 +0.7
1,721,706 + OKGIIK_07765 0.67 +0.1
1,721,706 + OKGIIK_07765 0.67 -0.0
1,721,707 - OKGIIK_07765 0.67 -2.3
1,721,707 - OKGIIK_07765 0.67 -2.0
1,721,707 - OKGIIK_07765 0.67 +0.4
1,721,707 - OKGIIK_07765 0.67 -0.5
1,721,707 - OKGIIK_07765 0.67 -0.9
1,721,707 - OKGIIK_07765 0.67 -0.0
1,721,707 - OKGIIK_07765 0.67 -1.1
1,721,707 - OKGIIK_07765 0.67 +1.2
1,721,707 - OKGIIK_07765 0.67 -0.4
1,721,707 - OKGIIK_07765 0.67 +1.3
1,721,707 - OKGIIK_07765 0.67 +0.5
1,721,733 + OKGIIK_07765 0.70 -0.1
1,721,733 + OKGIIK_07765 0.70 -0.8
1,721,733 + OKGIIK_07765 0.70 +0.7
1,721,734 - OKGIIK_07765 0.70 +2.2
1,721,734 - OKGIIK_07765 0.70 -0.9
1,721,734 - OKGIIK_07765 0.70 -0.6
1,721,734 - OKGIIK_07765 0.70 -0.7
1,721,734 - OKGIIK_07765 0.70 +2.0
1,721,810 + OKGIIK_07765 0.77 +0.1
1,721,883 + OKGIIK_07765 0.84 -0.0
1,721,883 + OKGIIK_07765 0.84 -1.1
1,721,883 + OKGIIK_07765 0.84 +1.0
1,721,914 + OKGIIK_07765 0.87 -0.3
1,721,914 + OKGIIK_07765 0.87 -0.6
1,721,914 + OKGIIK_07765 0.87 -0.3
1,721,915 - OKGIIK_07765 0.87 -1.7
1,721,915 - OKGIIK_07765 0.87 +1.3
1,721,915 - OKGIIK_07765 0.87 +0.5
1,722,034 - -1.8
1,722,106 + -1.2
1,722,106 + -0.3
1,722,106 + -0.0
1,722,106 + -0.3
1,722,106 + +0.6
1,722,106 + -0.2
1,722,106 + -1.7
1,722,106 + +0.6
1,722,106 + -2.0
1,722,106 + -1.3
1,722,106 + -1.3
1,722,107 - +0.4
1,722,107 - +0.5
1,722,107 - +0.1
1,722,107 - +0.2
1,722,107 - -0.2
1,722,107 - -2.4
1,722,107 - +0.7
1,722,107 - -0.4
1,722,107 - -0.1
1,722,107 - -2.5
1,722,332 + OKGIIK_07770 0.61 -2.2
1,722,332 + OKGIIK_07770 0.61 -0.6
1,722,332 + OKGIIK_07770 0.61 -0.9
1,722,333 - OKGIIK_07770 0.61 +0.5
1,722,333 - OKGIIK_07770 0.61 -0.6
1,722,333 - OKGIIK_07770 0.61 -0.3
1,722,333 - OKGIIK_07770 0.61 +0.7
1,722,333 - OKGIIK_07770 0.61 -1.9
1,722,333 - OKGIIK_07770 0.61 +0.1
1,722,439 + OKGIIK_07770 0.87 +0.6
1,722,439 + OKGIIK_07770 0.87 +0.4
1,722,439 + OKGIIK_07770 0.87 +0.3
1,722,439 + OKGIIK_07770 0.87 +0.5
1,722,439 + OKGIIK_07770 0.87 +0.1
1,722,439 + OKGIIK_07770 0.87 -0.6
1,722,439 + OKGIIK_07770 0.87 +0.7
1,722,440 - OKGIIK_07770 0.87 +0.1
1,722,440 - OKGIIK_07770 0.87 +0.9
1,722,440 - OKGIIK_07770 0.87 +0.7
1,722,440 - OKGIIK_07770 0.87 +0.6
1,722,485 + -0.9
1,722,486 - -0.6
1,722,486 - -0.9
1,722,521 - -2.4
1,722,595 - +0.4
1,722,595 - -0.5
1,722,595 - +0.0
1,722,595 - -0.9
1,722,595 - -0.3
1,722,666 + -0.2
1,722,666 + +1.0

Or see this region's nucleotide sequence