Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_07765 and OKGIIK_07770 are separated by 34 nucleotides OKGIIK_07770 and OKGIIK_07775 are separated by 385 nucleotides
OKGIIK_07765: OKGIIK_07765 - zinc-binding dehydrogenase, at 1,720,997 to 1,722,049
_07765
OKGIIK_07770: OKGIIK_07770 - Cupin, at 1,722,084 to 1,722,491
_07770
OKGIIK_07775: OKGIIK_07775 - IS110 family transposase, at 1,722,877 to 1,723,845
_07775
Position (kb)
1722
1723 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.286 kb on + strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.287 kb on - strand, within OKGIIK_07765 at 1721.448 kb on + strand, within OKGIIK_07765 at 1721.448 kb on + strand, within OKGIIK_07765 at 1721.448 kb on + strand, within OKGIIK_07765 at 1721.448 kb on + strand, within OKGIIK_07765 at 1721.448 kb on + strand, within OKGIIK_07765 at 1721.448 kb on + strand, within OKGIIK_07765 at 1721.448 kb on + strand, within OKGIIK_07765 at 1721.448 kb on + strand, within OKGIIK_07765 at 1721.449 kb on - strand, within OKGIIK_07765 at 1721.449 kb on - strand, within OKGIIK_07765 at 1721.449 kb on - strand, within OKGIIK_07765 at 1721.449 kb on - strand, within OKGIIK_07765 at 1721.449 kb on - strand, within OKGIIK_07765 at 1721.449 kb on - strand, within OKGIIK_07765 at 1721.449 kb on - strand, within OKGIIK_07765 at 1721.449 kb on - strand, within OKGIIK_07765 at 1721.556 kb on + strand, within OKGIIK_07765 at 1721.556 kb on + strand, within OKGIIK_07765 at 1721.556 kb on + strand, within OKGIIK_07765 at 1721.556 kb on + strand, within OKGIIK_07765 at 1721.556 kb on + strand, within OKGIIK_07765 at 1721.556 kb on + strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.557 kb on - strand, within OKGIIK_07765 at 1721.706 kb on + strand, within OKGIIK_07765 at 1721.706 kb on + strand, within OKGIIK_07765 at 1721.706 kb on + strand, within OKGIIK_07765 at 1721.706 kb on + strand, within OKGIIK_07765 at 1721.706 kb on + strand, within OKGIIK_07765 at 1721.706 kb on + strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.707 kb on - strand, within OKGIIK_07765 at 1721.733 kb on + strand, within OKGIIK_07765 at 1721.733 kb on + strand, within OKGIIK_07765 at 1721.733 kb on + strand, within OKGIIK_07765 at 1721.734 kb on - strand, within OKGIIK_07765 at 1721.734 kb on - strand, within OKGIIK_07765 at 1721.734 kb on - strand, within OKGIIK_07765 at 1721.734 kb on - strand, within OKGIIK_07765 at 1721.734 kb on - strand, within OKGIIK_07765 at 1721.810 kb on + strand, within OKGIIK_07765 at 1721.883 kb on + strand, within OKGIIK_07765 at 1721.883 kb on + strand, within OKGIIK_07765 at 1721.883 kb on + strand, within OKGIIK_07765 at 1721.914 kb on + strand, within OKGIIK_07765 at 1721.914 kb on + strand, within OKGIIK_07765 at 1721.914 kb on + strand, within OKGIIK_07765 at 1721.915 kb on - strand, within OKGIIK_07765 at 1721.915 kb on - strand, within OKGIIK_07765 at 1721.915 kb on - strand, within OKGIIK_07765 at 1722.034 kb on - strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.106 kb on + strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.107 kb on - strand at 1722.332 kb on + strand, within OKGIIK_07770 at 1722.332 kb on + strand, within OKGIIK_07770 at 1722.332 kb on + strand, within OKGIIK_07770 at 1722.333 kb on - strand, within OKGIIK_07770 at 1722.333 kb on - strand, within OKGIIK_07770 at 1722.333 kb on - strand, within OKGIIK_07770 at 1722.333 kb on - strand, within OKGIIK_07770 at 1722.333 kb on - strand, within OKGIIK_07770 at 1722.333 kb on - strand, within OKGIIK_07770 at 1722.439 kb on + strand, within OKGIIK_07770 at 1722.439 kb on + strand, within OKGIIK_07770 at 1722.439 kb on + strand, within OKGIIK_07770 at 1722.439 kb on + strand, within OKGIIK_07770 at 1722.439 kb on + strand, within OKGIIK_07770 at 1722.439 kb on + strand, within OKGIIK_07770 at 1722.439 kb on + strand, within OKGIIK_07770 at 1722.440 kb on - strand, within OKGIIK_07770 at 1722.440 kb on - strand, within OKGIIK_07770 at 1722.440 kb on - strand, within OKGIIK_07770 at 1722.440 kb on - strand, within OKGIIK_07770 at 1722.485 kb on + strand at 1722.486 kb on - strand at 1722.486 kb on - strand at 1722.521 kb on - strand at 1722.595 kb on - strand at 1722.595 kb on - strand at 1722.595 kb on - strand at 1722.595 kb on - strand at 1722.595 kb on - strand at 1722.666 kb on + strand at 1722.666 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,721,286 + OKGIIK_07765 0.27 +1.1 1,721,286 + OKGIIK_07765 0.27 +0.8 1,721,286 + OKGIIK_07765 0.27 +0.1 1,721,286 + OKGIIK_07765 0.27 +1.0 1,721,286 + OKGIIK_07765 0.27 +0.1 1,721,286 + OKGIIK_07765 0.27 -0.0 1,721,286 + OKGIIK_07765 0.27 -0.1 1,721,286 + OKGIIK_07765 0.27 +0.9 1,721,286 + OKGIIK_07765 0.27 +0.4 1,721,286 + OKGIIK_07765 0.27 -0.3 1,721,286 + OKGIIK_07765 0.27 +1.1 1,721,286 + OKGIIK_07765 0.27 -0.7 1,721,286 + OKGIIK_07765 0.27 +0.4 1,721,286 + OKGIIK_07765 0.27 -1.9 1,721,286 + OKGIIK_07765 0.27 -2.5 1,721,286 + OKGIIK_07765 0.27 +0.8 1,721,287 - OKGIIK_07765 0.28 +0.4 1,721,287 - OKGIIK_07765 0.28 +0.6 1,721,287 - OKGIIK_07765 0.28 -0.0 1,721,287 - OKGIIK_07765 0.28 +1.7 1,721,287 - OKGIIK_07765 0.28 +0.3 1,721,287 - OKGIIK_07765 0.28 +0.7 1,721,287 - OKGIIK_07765 0.28 -1.2 1,721,287 - OKGIIK_07765 0.28 -0.6 1,721,287 - OKGIIK_07765 0.28 -1.4 1,721,287 - OKGIIK_07765 0.28 +0.0 1,721,287 - OKGIIK_07765 0.28 -0.7 1,721,448 + OKGIIK_07765 0.43 +0.0 1,721,448 + OKGIIK_07765 0.43 +0.6 1,721,448 + OKGIIK_07765 0.43 +1.0 1,721,448 + OKGIIK_07765 0.43 -0.1 1,721,448 + OKGIIK_07765 0.43 +1.2 1,721,448 + OKGIIK_07765 0.43 -0.6 1,721,448 + OKGIIK_07765 0.43 -0.5 1,721,448 + OKGIIK_07765 0.43 +2.2 1,721,449 - OKGIIK_07765 0.43 -0.0 1,721,449 - OKGIIK_07765 0.43 -0.3 1,721,449 - OKGIIK_07765 0.43 -0.6 1,721,449 - OKGIIK_07765 0.43 +0.1 1,721,449 - OKGIIK_07765 0.43 +0.5 1,721,449 - OKGIIK_07765 0.43 +0.9 1,721,449 - OKGIIK_07765 0.43 +0.1 1,721,449 - OKGIIK_07765 0.43 +2.0 1,721,556 + OKGIIK_07765 0.53 -0.9 1,721,556 + OKGIIK_07765 0.53 -0.4 1,721,556 + OKGIIK_07765 0.53 -1.5 1,721,556 + OKGIIK_07765 0.53 -0.3 1,721,556 + OKGIIK_07765 0.53 +1.0 1,721,556 + OKGIIK_07765 0.53 +1.1 1,721,557 - OKGIIK_07765 0.53 -0.4 1,721,557 - OKGIIK_07765 0.53 +0.8 1,721,557 - OKGIIK_07765 0.53 +1.2 1,721,557 - OKGIIK_07765 0.53 -0.3 1,721,557 - OKGIIK_07765 0.53 +0.1 1,721,557 - OKGIIK_07765 0.53 +0.7 1,721,557 - OKGIIK_07765 0.53 +0.1 1,721,557 - OKGIIK_07765 0.53 -1.5 1,721,557 - OKGIIK_07765 0.53 +0.0 1,721,706 + OKGIIK_07765 0.67 +0.2 1,721,706 + OKGIIK_07765 0.67 -0.6 1,721,706 + OKGIIK_07765 0.67 +0.9 1,721,706 + OKGIIK_07765 0.67 +0.7 1,721,706 + OKGIIK_07765 0.67 +0.1 1,721,706 + OKGIIK_07765 0.67 -0.0 1,721,707 - OKGIIK_07765 0.67 -2.3 1,721,707 - OKGIIK_07765 0.67 -2.0 1,721,707 - OKGIIK_07765 0.67 +0.4 1,721,707 - OKGIIK_07765 0.67 -0.5 1,721,707 - OKGIIK_07765 0.67 -0.9 1,721,707 - OKGIIK_07765 0.67 -0.0 1,721,707 - OKGIIK_07765 0.67 -1.1 1,721,707 - OKGIIK_07765 0.67 +1.2 1,721,707 - OKGIIK_07765 0.67 -0.4 1,721,707 - OKGIIK_07765 0.67 +1.3 1,721,707 - OKGIIK_07765 0.67 +0.5 1,721,733 + OKGIIK_07765 0.70 -0.1 1,721,733 + OKGIIK_07765 0.70 -0.8 1,721,733 + OKGIIK_07765 0.70 +0.7 1,721,734 - OKGIIK_07765 0.70 +2.2 1,721,734 - OKGIIK_07765 0.70 -0.9 1,721,734 - OKGIIK_07765 0.70 -0.6 1,721,734 - OKGIIK_07765 0.70 -0.7 1,721,734 - OKGIIK_07765 0.70 +2.0 1,721,810 + OKGIIK_07765 0.77 +0.1 1,721,883 + OKGIIK_07765 0.84 -0.0 1,721,883 + OKGIIK_07765 0.84 -1.1 1,721,883 + OKGIIK_07765 0.84 +1.0 1,721,914 + OKGIIK_07765 0.87 -0.3 1,721,914 + OKGIIK_07765 0.87 -0.6 1,721,914 + OKGIIK_07765 0.87 -0.3 1,721,915 - OKGIIK_07765 0.87 -1.7 1,721,915 - OKGIIK_07765 0.87 +1.3 1,721,915 - OKGIIK_07765 0.87 +0.5 1,722,034 - -1.8 1,722,106 + -1.2 1,722,106 + -0.3 1,722,106 + -0.0 1,722,106 + -0.3 1,722,106 + +0.6 1,722,106 + -0.2 1,722,106 + -1.7 1,722,106 + +0.6 1,722,106 + -2.0 1,722,106 + -1.3 1,722,106 + -1.3 1,722,107 - +0.4 1,722,107 - +0.5 1,722,107 - +0.1 1,722,107 - +0.2 1,722,107 - -0.2 1,722,107 - -2.4 1,722,107 - +0.7 1,722,107 - -0.4 1,722,107 - -0.1 1,722,107 - -2.5 1,722,332 + OKGIIK_07770 0.61 -2.2 1,722,332 + OKGIIK_07770 0.61 -0.6 1,722,332 + OKGIIK_07770 0.61 -0.9 1,722,333 - OKGIIK_07770 0.61 +0.5 1,722,333 - OKGIIK_07770 0.61 -0.6 1,722,333 - OKGIIK_07770 0.61 -0.3 1,722,333 - OKGIIK_07770 0.61 +0.7 1,722,333 - OKGIIK_07770 0.61 -1.9 1,722,333 - OKGIIK_07770 0.61 +0.1 1,722,439 + OKGIIK_07770 0.87 +0.6 1,722,439 + OKGIIK_07770 0.87 +0.4 1,722,439 + OKGIIK_07770 0.87 +0.3 1,722,439 + OKGIIK_07770 0.87 +0.5 1,722,439 + OKGIIK_07770 0.87 +0.1 1,722,439 + OKGIIK_07770 0.87 -0.6 1,722,439 + OKGIIK_07770 0.87 +0.7 1,722,440 - OKGIIK_07770 0.87 +0.1 1,722,440 - OKGIIK_07770 0.87 +0.9 1,722,440 - OKGIIK_07770 0.87 +0.7 1,722,440 - OKGIIK_07770 0.87 +0.6 1,722,485 + -0.9 1,722,486 - -0.6 1,722,486 - -0.9 1,722,521 - -2.4 1,722,595 - +0.4 1,722,595 - -0.5 1,722,595 - +0.0 1,722,595 - -0.9 1,722,595 - -0.3 1,722,666 + -0.2 1,722,666 + +1.0
Or see this region's nucleotide sequence