Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_07410 and OKGIIK_07415 are separated by 94 nucleotides OKGIIK_07415 and OKGIIK_07420 are separated by 177 nucleotides OKGIIK_07420 and Leu_trna are separated by 216 nucleotides Leu_trna and secG are separated by 11 nucleotides
OKGIIK_07410: OKGIIK_07410 - Ribonuclease E, at 1,635,595 to 1,638,744
_07410
OKGIIK_07415: OKGIIK_07415 - DNA-binding response regulator, at 1,638,839 to 1,639,492
_07415
OKGIIK_07420: OKGIIK_07420 - hypothetical protein, at 1,639,670 to 1,639,906
_07420
OKGIIK_07425: Leu_trna - tRNA-Leu, at 1,640,123 to 1,640,207
_trna
OKGIIK_07430: secG - preprotein translocase subunit SecG, at 1,640,219 to 1,640,671
secG
Position (kb)
1638
1639
1640 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1638.234 kb on + strand, within OKGIIK_07410 at 1638.234 kb on + strand, within OKGIIK_07410 at 1638.235 kb on - strand, within OKGIIK_07410 at 1638.235 kb on - strand, within OKGIIK_07410 at 1638.235 kb on - strand, within OKGIIK_07410 at 1638.235 kb on - strand, within OKGIIK_07410 at 1638.235 kb on - strand, within OKGIIK_07410 at 1638.235 kb on - strand, within OKGIIK_07410 at 1638.235 kb on - strand, within OKGIIK_07410 at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.565 kb on + strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.566 kb on - strand at 1638.798 kb on + strand at 1638.798 kb on + strand at 1638.798 kb on + strand at 1638.865 kb on + strand at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.948 kb on + strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1638.949 kb on - strand, within OKGIIK_07415 at 1639.122 kb on + strand, within OKGIIK_07415 at 1639.122 kb on + strand, within OKGIIK_07415 at 1639.123 kb on - strand, within OKGIIK_07415 at 1639.123 kb on - strand, within OKGIIK_07415 at 1639.191 kb on + strand, within OKGIIK_07415 at 1639.191 kb on + strand, within OKGIIK_07415 at 1639.297 kb on + strand, within OKGIIK_07415 at 1639.297 kb on + strand, within OKGIIK_07415 at 1639.298 kb on - strand, within OKGIIK_07415 at 1639.360 kb on + strand, within OKGIIK_07415 at 1639.360 kb on + strand, within OKGIIK_07415 at 1639.360 kb on + strand, within OKGIIK_07415 at 1639.361 kb on - strand, within OKGIIK_07415 at 1639.361 kb on - strand, within OKGIIK_07415 at 1639.361 kb on - strand, within OKGIIK_07415 at 1639.493 kb on + strand at 1639.493 kb on + strand at 1639.493 kb on + strand at 1639.493 kb on + strand at 1639.493 kb on + strand at 1639.493 kb on + strand at 1639.493 kb on + strand at 1639.493 kb on + strand at 1639.493 kb on + strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.494 kb on - strand at 1639.526 kb on + strand at 1639.526 kb on + strand at 1639.526 kb on + strand at 1639.526 kb on + strand at 1639.526 kb on + strand at 1639.527 kb on - strand at 1639.527 kb on - strand at 1639.776 kb on + strand, within OKGIIK_07420 at 1639.776 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.790 kb on + strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.791 kb on - strand, within OKGIIK_07420 at 1639.897 kb on + strand at 1639.897 kb on + strand at 1639.897 kb on + strand at 1639.897 kb on + strand at 1639.897 kb on + strand at 1639.898 kb on - strand at 1639.898 kb on - strand at 1639.913 kb on + strand at 1639.913 kb on + strand at 1639.913 kb on + strand at 1639.913 kb on + strand at 1639.914 kb on - strand at 1639.914 kb on - strand at 1639.914 kb on - strand at 1639.914 kb on - strand at 1639.914 kb on - strand at 1639.914 kb on - strand at 1639.914 kb on - strand at 1639.965 kb on + strand at 1639.965 kb on + strand at 1639.965 kb on + strand at 1639.965 kb on + strand at 1639.965 kb on + strand at 1639.965 kb on + strand at 1639.965 kb on + strand at 1639.965 kb on + strand at 1639.965 kb on + strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.966 kb on - strand at 1639.981 kb on + strand at 1639.981 kb on + strand at 1639.981 kb on + strand at 1639.981 kb on + strand at 1639.981 kb on + strand at 1639.981 kb on + strand at 1639.982 kb on - strand at 1639.982 kb on - strand at 1639.982 kb on - strand at 1639.982 kb on - strand at 1639.982 kb on - strand at 1639.982 kb on - strand at 1639.982 kb on - strand at 1639.982 kb on - strand at 1640.017 kb on + strand at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG at 1640.455 kb on - strand, within secG
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,638,234 + OKGIIK_07410 0.84 -0.7 1,638,234 + OKGIIK_07410 0.84 +0.3 1,638,235 - OKGIIK_07410 0.84 +0.1 1,638,235 - OKGIIK_07410 0.84 +1.0 1,638,235 - OKGIIK_07410 0.84 +0.8 1,638,235 - OKGIIK_07410 0.84 -0.3 1,638,235 - OKGIIK_07410 0.84 +0.6 1,638,235 - OKGIIK_07410 0.84 -0.1 1,638,235 - OKGIIK_07410 0.84 +0.7 1,638,565 + -0.4 1,638,565 + -2.2 1,638,565 + -0.6 1,638,565 + -0.3 1,638,565 + +0.3 1,638,565 + -2.1 1,638,565 + -0.4 1,638,565 + -0.1 1,638,565 + +0.5 1,638,565 + +0.5 1,638,565 + -1.6 1,638,566 - +0.0 1,638,566 - -0.3 1,638,566 - +0.7 1,638,566 - +0.5 1,638,566 - -0.2 1,638,566 - +1.7 1,638,566 - -0.2 1,638,566 - -0.3 1,638,566 - -1.9 1,638,566 - -0.0 1,638,566 - +0.2 1,638,798 + +0.8 1,638,798 + -0.6 1,638,798 + -1.9 1,638,865 + -0.8 1,638,948 + OKGIIK_07415 0.17 -0.3 1,638,948 + OKGIIK_07415 0.17 +1.7 1,638,948 + OKGIIK_07415 0.17 -0.5 1,638,948 + OKGIIK_07415 0.17 -0.3 1,638,948 + OKGIIK_07415 0.17 +0.7 1,638,948 + OKGIIK_07415 0.17 -1.8 1,638,948 + OKGIIK_07415 0.17 -3.2 1,638,948 + OKGIIK_07415 0.17 -0.5 1,638,948 + OKGIIK_07415 0.17 -1.8 1,638,948 + OKGIIK_07415 0.17 +0.3 1,638,948 + OKGIIK_07415 0.17 -0.1 1,638,948 + OKGIIK_07415 0.17 +0.3 1,638,948 + OKGIIK_07415 0.17 -0.1 1,638,948 + OKGIIK_07415 0.17 -0.0 1,638,948 + OKGIIK_07415 0.17 -0.1 1,638,948 + OKGIIK_07415 0.17 +0.3 1,638,948 + OKGIIK_07415 0.17 +0.9 1,638,948 + OKGIIK_07415 0.17 +0.0 1,638,948 + OKGIIK_07415 0.17 +1.2 1,638,948 + OKGIIK_07415 0.17 -0.9 1,638,948 + OKGIIK_07415 0.17 +0.7 1,638,948 + OKGIIK_07415 0.17 -1.5 1,638,948 + OKGIIK_07415 0.17 -0.9 1,638,948 + OKGIIK_07415 0.17 -0.8 1,638,948 + OKGIIK_07415 0.17 +1.9 1,638,948 + OKGIIK_07415 0.17 -0.9 1,638,949 - OKGIIK_07415 0.17 -0.2 1,638,949 - OKGIIK_07415 0.17 -0.4 1,638,949 - OKGIIK_07415 0.17 -0.3 1,638,949 - OKGIIK_07415 0.17 +1.4 1,638,949 - OKGIIK_07415 0.17 +1.6 1,638,949 - OKGIIK_07415 0.17 -0.5 1,638,949 - OKGIIK_07415 0.17 +1.7 1,638,949 - OKGIIK_07415 0.17 -1.6 1,638,949 - OKGIIK_07415 0.17 +0.4 1,638,949 - OKGIIK_07415 0.17 -0.3 1,638,949 - OKGIIK_07415 0.17 +0.1 1,638,949 - OKGIIK_07415 0.17 -1.6 1,639,122 + OKGIIK_07415 0.43 +0.4 1,639,122 + OKGIIK_07415 0.43 -0.6 1,639,123 - OKGIIK_07415 0.43 -1.4 1,639,123 - OKGIIK_07415 0.43 +0.9 1,639,191 + OKGIIK_07415 0.54 -0.8 1,639,191 + OKGIIK_07415 0.54 -0.4 1,639,297 + OKGIIK_07415 0.70 +0.1 1,639,297 + OKGIIK_07415 0.70 +0.7 1,639,298 - OKGIIK_07415 0.70 +0.1 1,639,360 + OKGIIK_07415 0.80 +0.4 1,639,360 + OKGIIK_07415 0.80 +0.3 1,639,360 + OKGIIK_07415 0.80 -0.9 1,639,361 - OKGIIK_07415 0.80 -1.0 1,639,361 - OKGIIK_07415 0.80 +0.2 1,639,361 - OKGIIK_07415 0.80 -0.0 1,639,493 + +0.2 1,639,493 + +0.4 1,639,493 + -0.8 1,639,493 + -0.8 1,639,493 + -0.9 1,639,493 + +0.1 1,639,493 + +1.3 1,639,493 + -0.9 1,639,493 + +1.0 1,639,494 - -1.1 1,639,494 - -0.8 1,639,494 - -1.3 1,639,494 - -0.7 1,639,494 - -0.1 1,639,494 - -0.6 1,639,494 - -0.6 1,639,494 - -1.7 1,639,494 - -0.1 1,639,494 - +0.1 1,639,494 - -0.2 1,639,494 - +0.8 1,639,494 - -0.3 1,639,526 + -1.1 1,639,526 + -0.4 1,639,526 + -0.2 1,639,526 + -1.6 1,639,526 + -1.1 1,639,527 - -0.4 1,639,527 - -0.6 1,639,776 + OKGIIK_07420 0.45 +0.4 1,639,776 + OKGIIK_07420 0.45 -0.9 1,639,790 + OKGIIK_07420 0.51 -0.3 1,639,790 + OKGIIK_07420 0.51 -0.8 1,639,790 + OKGIIK_07420 0.51 -0.4 1,639,790 + OKGIIK_07420 0.51 -1.6 1,639,790 + OKGIIK_07420 0.51 +0.3 1,639,790 + OKGIIK_07420 0.51 -2.0 1,639,790 + OKGIIK_07420 0.51 +0.2 1,639,790 + OKGIIK_07420 0.51 -0.6 1,639,790 + OKGIIK_07420 0.51 +0.4 1,639,790 + OKGIIK_07420 0.51 +0.2 1,639,790 + OKGIIK_07420 0.51 -0.2 1,639,790 + OKGIIK_07420 0.51 -0.1 1,639,790 + OKGIIK_07420 0.51 -1.3 1,639,790 + OKGIIK_07420 0.51 -0.3 1,639,790 + OKGIIK_07420 0.51 +1.0 1,639,790 + OKGIIK_07420 0.51 +1.9 1,639,790 + OKGIIK_07420 0.51 +0.2 1,639,790 + OKGIIK_07420 0.51 +2.0 1,639,790 + OKGIIK_07420 0.51 -0.3 1,639,790 + OKGIIK_07420 0.51 +0.1 1,639,791 - OKGIIK_07420 0.51 +0.3 1,639,791 - OKGIIK_07420 0.51 -1.0 1,639,791 - OKGIIK_07420 0.51 +0.7 1,639,791 - OKGIIK_07420 0.51 -0.2 1,639,791 - OKGIIK_07420 0.51 -0.1 1,639,791 - OKGIIK_07420 0.51 +0.5 1,639,791 - OKGIIK_07420 0.51 -1.5 1,639,791 - OKGIIK_07420 0.51 +0.7 1,639,791 - OKGIIK_07420 0.51 -1.6 1,639,791 - OKGIIK_07420 0.51 -0.1 1,639,791 - OKGIIK_07420 0.51 +0.6 1,639,897 + +1.4 1,639,897 + -0.6 1,639,897 + -0.6 1,639,897 + -0.1 1,639,897 + +0.9 1,639,898 - +0.8 1,639,898 - -0.5 1,639,913 + -0.2 1,639,913 + -1.5 1,639,913 + +1.7 1,639,913 + -0.2 1,639,914 - +0.4 1,639,914 - -1.0 1,639,914 - -0.5 1,639,914 - -1.1 1,639,914 - -1.6 1,639,914 - -0.5 1,639,914 - +0.4 1,639,965 + -1.9 1,639,965 + -0.3 1,639,965 + +1.0 1,639,965 + +0.3 1,639,965 + -0.7 1,639,965 + -0.1 1,639,965 + +0.7 1,639,965 + -0.4 1,639,965 + -0.0 1,639,966 - -1.1 1,639,966 - -2.0 1,639,966 - -1.0 1,639,966 - -1.0 1,639,966 - +0.0 1,639,966 - +0.7 1,639,966 - +1.3 1,639,966 - -0.6 1,639,966 - -0.9 1,639,966 - -0.2 1,639,966 - -0.2 1,639,966 - +1.7 1,639,966 - -2.0 1,639,981 + -0.3 1,639,981 + -1.3 1,639,981 + +0.9 1,639,981 + -0.8 1,639,981 + -0.0 1,639,981 + +0.3 1,639,982 - -2.0 1,639,982 - +0.0 1,639,982 - -0.2 1,639,982 - -0.2 1,639,982 - -0.8 1,639,982 - +0.4 1,639,982 - -0.6 1,639,982 - -0.9 1,640,017 + +0.2 1,640,455 - secG OKGIIK_07430 0.52 +0.4 1,640,455 - secG OKGIIK_07430 0.52 -1.2 1,640,455 - secG OKGIIK_07430 0.52 -0.4 1,640,455 - secG OKGIIK_07430 0.52 -2.5 1,640,455 - secG OKGIIK_07430 0.52 +1.4 1,640,455 - secG OKGIIK_07430 0.52 -1.0 1,640,455 - secG OKGIIK_07430 0.52 -1.1 1,640,455 - secG OKGIIK_07430 0.52 +0.1 1,640,455 - secG OKGIIK_07430 0.52 -0.1 1,640,455 - secG OKGIIK_07430 0.52 -1.9 1,640,455 - secG OKGIIK_07430 0.52 -0.4 1,640,455 - secG OKGIIK_07430 0.52 -0.9 1,640,455 - secG OKGIIK_07430 0.52 -0.8 1,640,455 - secG OKGIIK_07430 0.52 -0.3 1,640,455 - secG OKGIIK_07430 0.52 -0.6 1,640,455 - secG OKGIIK_07430 0.52 -0.9 1,640,455 - secG OKGIIK_07430 0.52 -0.4 1,640,455 - secG OKGIIK_07430 0.52 +0.6 1,640,455 - secG OKGIIK_07430 0.52 -1.5 1,640,455 - secG OKGIIK_07430 0.52 -1.9
Or see this region's nucleotide sequence