Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt prfB and OKGIIK_07020 are separated by 27 nucleotides OKGIIK_07020 and lysS are separated by 95 nucleotides lysS and OKGIIK_07030 are separated by 3 nucleotides OKGIIK_07030 and OKGIIK_07035 overlap by 4 nucleotides OKGIIK_07035 and smc are separated by 143 nucleotides
OKGIIK_07015: prfB - peptide chain release factor 2, at 1,555,017 to 1,556,006
prfB
OKGIIK_07020: OKGIIK_07020 - hypothetical protein, at 1,556,034 to 1,556,360
_07020
OKGIIK_07025: lysS - lysine--tRNA ligase, at 1,556,456 to 1,557,991
lysS
OKGIIK_07030: OKGIIK_07030 - YciI family protein, at 1,557,995 to 1,558,294
_07030
OKGIIK_07035: OKGIIK_07035 - BolA family transcriptional regulator, at 1,558,291 to 1,558,545
_07035
OKGIIK_07040: smc - chromosome segregation protein SMC, at 1,558,689 to 1,562,198
smc
Position (kb) 1556
1557
1558 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1558.001 kb on + strand at 1558.001 kb on + strand at 1558.002 kb on - strand at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.232 kb on + strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.233 kb on - strand, within OKGIIK_07030 at 1558.250 kb on + strand, within OKGIIK_07030 at 1558.250 kb on + strand, within OKGIIK_07030 at 1558.250 kb on + strand, within OKGIIK_07030 at 1558.250 kb on + strand, within OKGIIK_07030 at 1558.251 kb on - strand, within OKGIIK_07030 at 1558.251 kb on - strand, within OKGIIK_07030 at 1558.251 kb on - strand, within OKGIIK_07030 at 1558.251 kb on - strand, within OKGIIK_07030 at 1558.483 kb on + strand, within OKGIIK_07035 at 1558.483 kb on + strand, within OKGIIK_07035 at 1558.483 kb on + strand, within OKGIIK_07035 at 1558.483 kb on + strand, within OKGIIK_07035 at 1558.483 kb on + strand, within OKGIIK_07035 at 1558.483 kb on + strand, within OKGIIK_07035 at 1558.483 kb on + strand, within OKGIIK_07035 at 1558.483 kb on + strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.484 kb on - strand, within OKGIIK_07035 at 1558.549 kb on - strand at 1558.559 kb on - strand at 1558.565 kb on - strand at 1558.565 kb on - strand at 1558.805 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,558,001 + -0.6 1,558,001 + +0.6 1,558,002 - +1.3 1,558,232 + OKGIIK_07030 0.79 -0.8 1,558,232 + OKGIIK_07030 0.79 -0.3 1,558,232 + OKGIIK_07030 0.79 +1.3 1,558,232 + OKGIIK_07030 0.79 -0.3 1,558,232 + OKGIIK_07030 0.79 -0.4 1,558,232 + OKGIIK_07030 0.79 -1.1 1,558,232 + OKGIIK_07030 0.79 +0.7 1,558,232 + OKGIIK_07030 0.79 -0.1 1,558,232 + OKGIIK_07030 0.79 +0.5 1,558,232 + OKGIIK_07030 0.79 +0.9 1,558,232 + OKGIIK_07030 0.79 -0.3 1,558,232 + OKGIIK_07030 0.79 -0.9 1,558,232 + OKGIIK_07030 0.79 +1.1 1,558,232 + OKGIIK_07030 0.79 +0.4 1,558,233 - OKGIIK_07030 0.79 +1.4 1,558,233 - OKGIIK_07030 0.79 +0.2 1,558,233 - OKGIIK_07030 0.79 +1.9 1,558,233 - OKGIIK_07030 0.79 -1.5 1,558,233 - OKGIIK_07030 0.79 -1.9 1,558,233 - OKGIIK_07030 0.79 +0.1 1,558,233 - OKGIIK_07030 0.79 +0.7 1,558,233 - OKGIIK_07030 0.79 -0.6 1,558,233 - OKGIIK_07030 0.79 +0.9 1,558,250 + OKGIIK_07030 0.85 -0.4 1,558,250 + OKGIIK_07030 0.85 -1.9 1,558,250 + OKGIIK_07030 0.85 -0.3 1,558,250 + OKGIIK_07030 0.85 +0.7 1,558,251 - OKGIIK_07030 0.85 -0.1 1,558,251 - OKGIIK_07030 0.85 +0.0 1,558,251 - OKGIIK_07030 0.85 +1.2 1,558,251 - OKGIIK_07030 0.85 +1.3 1,558,483 + OKGIIK_07035 0.75 +0.7 1,558,483 + OKGIIK_07035 0.75 -0.3 1,558,483 + OKGIIK_07035 0.75 -0.2 1,558,483 + OKGIIK_07035 0.75 -0.6 1,558,483 + OKGIIK_07035 0.75 -0.7 1,558,483 + OKGIIK_07035 0.75 -0.1 1,558,483 + OKGIIK_07035 0.75 -0.0 1,558,483 + OKGIIK_07035 0.75 +0.5 1,558,484 - OKGIIK_07035 0.76 -0.3 1,558,484 - OKGIIK_07035 0.76 -1.9 1,558,484 - OKGIIK_07035 0.76 -0.3 1,558,484 - OKGIIK_07035 0.76 -0.8 1,558,484 - OKGIIK_07035 0.76 -0.4 1,558,484 - OKGIIK_07035 0.76 -0.1 1,558,484 - OKGIIK_07035 0.76 -1.1 1,558,484 - OKGIIK_07035 0.76 -1.3 1,558,484 - OKGIIK_07035 0.76 -1.1 1,558,484 - OKGIIK_07035 0.76 -0.9 1,558,549 - +0.1 1,558,559 - -0.3 1,558,565 - -1.5 1,558,565 - +0.4 1,558,805 + -0.6
Or see this region's nucleotide sequence