Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_03985 and rplU are separated by 110 nucleotides rplU and rpmA are separated by 19 nucleotides rpmA and obgE are separated by 178 nucleotides
OKGIIK_03985: OKGIIK_03985 - DUF2059 domain-containing protein, at 873,838 to 874,470
_03985
OKGIIK_03990: rplU - 50S ribosomal protein L21, at 874,581 to 874,895
rplU
OKGIIK_03995: rpmA - 50S ribosomal protein L27, at 874,915 to 875,172
rpmA
OKGIIK_04000: obgE - GTPase ObgE, at 875,351 to 876,430
obgE
Position (kb) 874
875
876 Strain fitness (log2 ratio) -2
-1
0
1 at 873.929 kb on + strand, within OKGIIK_03985 at 873.929 kb on + strand, within OKGIIK_03985 at 873.929 kb on + strand, within OKGIIK_03985 at 873.929 kb on + strand, within OKGIIK_03985 at 873.930 kb on - strand, within OKGIIK_03985 at 873.930 kb on - strand, within OKGIIK_03985 at 873.930 kb on - strand, within OKGIIK_03985 at 873.930 kb on - strand, within OKGIIK_03985 at 874.034 kb on - strand, within OKGIIK_03985 at 874.034 kb on - strand, within OKGIIK_03985 at 874.034 kb on - strand, within OKGIIK_03985 at 874.034 kb on - strand, within OKGIIK_03985 at 874.144 kb on + strand, within OKGIIK_03985 at 874.145 kb on - strand, within OKGIIK_03985 at 874.145 kb on - strand, within OKGIIK_03985 at 874.145 kb on - strand, within OKGIIK_03985 at 874.510 kb on + strand at 875.260 kb on + strand at 875.260 kb on + strand at 875.260 kb on + strand at 875.260 kb on + strand at 875.260 kb on + strand at 875.260 kb on + strand at 875.287 kb on + strand at 875.287 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 873,929 + OKGIIK_03985 0.14 -0.6 873,929 + OKGIIK_03985 0.14 -1.2 873,929 + OKGIIK_03985 0.14 -1.1 873,929 + OKGIIK_03985 0.14 +0.3 873,930 - OKGIIK_03985 0.15 -1.3 873,930 - OKGIIK_03985 0.15 -0.5 873,930 - OKGIIK_03985 0.15 +1.1 873,930 - OKGIIK_03985 0.15 -0.3 874,034 - OKGIIK_03985 0.31 -0.1 874,034 - OKGIIK_03985 0.31 +0.0 874,034 - OKGIIK_03985 0.31 +1.1 874,034 - OKGIIK_03985 0.31 +0.7 874,144 + OKGIIK_03985 0.48 +1.7 874,145 - OKGIIK_03985 0.48 -2.2 874,145 - OKGIIK_03985 0.48 +0.9 874,145 - OKGIIK_03985 0.48 -0.1 874,510 + -0.7 875,260 + -0.3 875,260 + +0.2 875,260 + +1.1 875,260 + +0.9 875,260 + -0.0 875,260 + -1.4 875,287 + -1.9 875,287 + -0.4
Or see this region's nucleotide sequence