Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt motD and OKGIIK_02860 are separated by 28 nucleotides OKGIIK_02860 and OKGIIK_02865 overlap by 11 nucleotides OKGIIK_02865 and OKGIIK_02870 are separated by 31 nucleotides OKGIIK_02870 and OKGIIK_02875 overlap by 4 nucleotides
OKGIIK_02855: motD - flagellar motor protein MotD, at 657,072 to 658,133
motD
OKGIIK_02860: OKGIIK_02860 - Chemotaxis protein CheW, at 658,162 to 658,641
_02860
OKGIIK_02865: OKGIIK_02865 - DUF2802 domain-containing protein, at 658,631 to 658,984
_02865
OKGIIK_02870: OKGIIK_02870 - Flagellar biosynthesis protein, at 659,016 to 659,267
_02870
OKGIIK_02875: OKGIIK_02875 - Flg-hook domain-containing protein, at 659,264 to 660,406
_02875
Position (kb) 658
659 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 657.171 kb on + strand at 657.171 kb on + strand at 657.171 kb on + strand at 657.171 kb on + strand at 657.171 kb on + strand at 657.171 kb on + strand at 657.171 kb on + strand at 657.171 kb on + strand at 657.172 kb on - strand at 657.172 kb on - strand at 657.172 kb on - strand at 657.172 kb on - strand at 657.172 kb on - strand at 657.687 kb on + strand, within motD at 657.687 kb on + strand, within motD at 657.687 kb on + strand, within motD at 657.859 kb on + strand, within motD at 657.859 kb on + strand, within motD at 657.859 kb on + strand, within motD at 657.859 kb on + strand, within motD at 657.860 kb on - strand, within motD at 657.860 kb on - strand, within motD at 657.860 kb on - strand, within motD at 657.860 kb on - strand, within motD at 657.860 kb on - strand, within motD at 657.860 kb on - strand, within motD at 658.234 kb on + strand, within OKGIIK_02860 at 658.234 kb on + strand, within OKGIIK_02860 at 658.234 kb on + strand, within OKGIIK_02860 at 658.234 kb on + strand, within OKGIIK_02860 at 658.235 kb on - strand, within OKGIIK_02860 at 658.235 kb on - strand, within OKGIIK_02860 at 658.235 kb on - strand, within OKGIIK_02860 at 658.454 kb on + strand, within OKGIIK_02860 at 658.656 kb on + strand at 658.656 kb on + strand at 658.656 kb on + strand at 658.657 kb on - strand at 658.657 kb on - strand at 658.657 kb on - strand at 658.657 kb on - strand at 658.657 kb on - strand at 658.657 kb on - strand at 658.657 kb on - strand at 659.018 kb on - strand at 659.035 kb on - strand at 659.036 kb on - strand at 659.036 kb on - strand at 659.068 kb on + strand, within OKGIIK_02870 at 659.069 kb on - strand, within OKGIIK_02870 at 659.069 kb on - strand, within OKGIIK_02870 at 659.602 kb on - strand, within OKGIIK_02875
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 657,171 + +0.3 657,171 + +0.5 657,171 + -1.8 657,171 + -1.7 657,171 + +0.6 657,171 + -0.4 657,171 + -0.5 657,171 + -1.1 657,172 - +0.6 657,172 - +0.3 657,172 - +0.1 657,172 - +0.6 657,172 - -1.6 657,687 + motD OKGIIK_02855 0.58 -0.1 657,687 + motD OKGIIK_02855 0.58 +1.0 657,687 + motD OKGIIK_02855 0.58 +0.1 657,859 + motD OKGIIK_02855 0.74 +0.7 657,859 + motD OKGIIK_02855 0.74 +0.3 657,859 + motD OKGIIK_02855 0.74 -0.7 657,859 + motD OKGIIK_02855 0.74 -0.5 657,860 - motD OKGIIK_02855 0.74 +1.0 657,860 - motD OKGIIK_02855 0.74 -0.7 657,860 - motD OKGIIK_02855 0.74 -0.6 657,860 - motD OKGIIK_02855 0.74 +0.6 657,860 - motD OKGIIK_02855 0.74 -0.5 657,860 - motD OKGIIK_02855 0.74 -0.9 658,234 + OKGIIK_02860 0.15 +1.8 658,234 + OKGIIK_02860 0.15 +0.7 658,234 + OKGIIK_02860 0.15 +0.2 658,234 + OKGIIK_02860 0.15 -0.7 658,235 - OKGIIK_02860 0.15 -0.3 658,235 - OKGIIK_02860 0.15 +0.8 658,235 - OKGIIK_02860 0.15 -0.3 658,454 + OKGIIK_02860 0.61 -1.0 658,656 + -1.0 658,656 + +0.0 658,656 + -0.5 658,657 - +0.7 658,657 - -0.4 658,657 - -1.9 658,657 - +0.9 658,657 - -1.1 658,657 - -0.6 658,657 - +0.7 659,018 - +0.8 659,035 - -0.0 659,036 - +0.3 659,036 - -3.4 659,068 + OKGIIK_02870 0.21 +0.2 659,069 - OKGIIK_02870 0.21 +1.1 659,069 - OKGIIK_02870 0.21 -1.1 659,602 - OKGIIK_02875 0.30 -2.7
Or see this region's nucleotide sequence