Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_02765

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntfliI and fliJ overlap by 4 nucleotidesfliJ and OKGIIK_02770 are separated by 64 nucleotides OKGIIK_02760: fliI - flagellar protein export ATPase FliI, at 638,504 to 639,883 fliI OKGIIK_02765: fliJ - flagellar export protein FliJ, at 639,880 to 640,305 fliJ OKGIIK_02770: OKGIIK_02770 - Flg-hook domain-containing protein, at 640,370 to 641,452 _02770 Position (kb) 639 640 641Strain fitness (log2 ratio) -2 -1 0 1at 638.881 kb on - strand, within fliIat 639.095 kb on + strand, within fliIat 639.096 kb on - strand, within fliIat 639.096 kb on - strand, within fliIat 639.257 kb on + strand, within fliIat 639.258 kb on - strand, within fliIat 639.258 kb on - strand, within fliIat 639.258 kb on - strand, within fliIat 639.258 kb on - strand, within fliIat 639.333 kb on - strand, within fliIat 639.333 kb on - strand, within fliIat 639.393 kb on - strand, within fliIat 639.479 kb on + strand, within fliIat 639.479 kb on + strand, within fliIat 639.479 kb on + strand, within fliIat 639.479 kb on + strand, within fliIat 639.479 kb on + strand, within fliIat 639.479 kb on + strand, within fliIat 639.480 kb on - strand, within fliIat 639.480 kb on - strand, within fliIat 639.480 kb on - strand, within fliIat 639.507 kb on - strand, within fliIat 639.507 kb on - strand, within fliIat 639.556 kb on + strand, within fliIat 639.557 kb on - strand, within fliIat 639.557 kb on - strand, within fliIat 639.689 kb on + strand, within fliIat 639.689 kb on + strand, within fliIat 639.689 kb on + strand, within fliIat 639.689 kb on + strand, within fliIat 639.690 kb on - strand, within fliIat 639.690 kb on - strand, within fliIat 639.690 kb on - strand, within fliIat 639.690 kb on - strand, within fliIat 639.690 kb on - strand, within fliIat 639.690 kb on - strand, within fliIat 639.690 kb on - strand, within fliIat 639.690 kb on - strand, within fliIat 639.690 kb on - strand, within fliIat 639.698 kb on + strand, within fliIat 639.734 kb on + strand, within fliIat 640.027 kb on + strand, within fliJat 640.027 kb on + strand, within fliJat 640.027 kb on + strand, within fliJat 640.027 kb on + strand, within fliJat 640.027 kb on + strand, within fliJat 640.027 kb on + strand, within fliJat 640.027 kb on + strand, within fliJat 640.027 kb on + strand, within fliJat 640.028 kb on - strand, within fliJat 640.028 kb on - strand, within fliJat 640.028 kb on - strand, within fliJat 640.028 kb on - strand, within fliJat 640.028 kb on - strand, within fliJat 640.518 kb on + strand, within OKGIIK_02770at 640.518 kb on + strand, within OKGIIK_02770at 640.518 kb on + strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770at 640.519 kb on - strand, within OKGIIK_02770

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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638,881 - fliI OKGIIK_02760 0.27 +0.0
639,095 + fliI OKGIIK_02760 0.43 +0.1
639,096 - fliI OKGIIK_02760 0.43 -0.3
639,096 - fliI OKGIIK_02760 0.43 -1.6
639,257 + fliI OKGIIK_02760 0.55 +0.1
639,258 - fliI OKGIIK_02760 0.55 -1.3
639,258 - fliI OKGIIK_02760 0.55 -1.2
639,258 - fliI OKGIIK_02760 0.55 -0.7
639,258 - fliI OKGIIK_02760 0.55 -0.2
639,333 - fliI OKGIIK_02760 0.60 -0.2
639,333 - fliI OKGIIK_02760 0.60 +0.9
639,393 - fliI OKGIIK_02760 0.64 -1.0
639,479 + fliI OKGIIK_02760 0.71 +0.0
639,479 + fliI OKGIIK_02760 0.71 -0.7
639,479 + fliI OKGIIK_02760 0.71 -1.0
639,479 + fliI OKGIIK_02760 0.71 +0.3
639,479 + fliI OKGIIK_02760 0.71 +0.3
639,479 + fliI OKGIIK_02760 0.71 -0.7
639,480 - fliI OKGIIK_02760 0.71 +0.8
639,480 - fliI OKGIIK_02760 0.71 -1.5
639,480 - fliI OKGIIK_02760 0.71 -1.2
639,507 - fliI OKGIIK_02760 0.73 +0.6
639,507 - fliI OKGIIK_02760 0.73 -0.7
639,556 + fliI OKGIIK_02760 0.76 -0.3
639,557 - fliI OKGIIK_02760 0.76 +0.4
639,557 - fliI OKGIIK_02760 0.76 +0.7
639,689 + fliI OKGIIK_02760 0.86 +0.3
639,689 + fliI OKGIIK_02760 0.86 -0.7
639,689 + fliI OKGIIK_02760 0.86 -0.8
639,689 + fliI OKGIIK_02760 0.86 +0.0
639,690 - fliI OKGIIK_02760 0.86 -0.4
639,690 - fliI OKGIIK_02760 0.86 -0.1
639,690 - fliI OKGIIK_02760 0.86 -0.5
639,690 - fliI OKGIIK_02760 0.86 +0.7
639,690 - fliI OKGIIK_02760 0.86 +0.9
639,690 - fliI OKGIIK_02760 0.86 -1.0
639,690 - fliI OKGIIK_02760 0.86 +0.0
639,690 - fliI OKGIIK_02760 0.86 +1.3
639,690 - fliI OKGIIK_02760 0.86 -0.6
639,698 + fliI OKGIIK_02760 0.87 +0.0
639,734 + fliI OKGIIK_02760 0.89 -1.7
640,027 + fliJ OKGIIK_02765 0.35 -1.0
640,027 + fliJ OKGIIK_02765 0.35 -1.3
640,027 + fliJ OKGIIK_02765 0.35 +0.0
640,027 + fliJ OKGIIK_02765 0.35 -1.0
640,027 + fliJ OKGIIK_02765 0.35 -0.7
640,027 + fliJ OKGIIK_02765 0.35 -1.0
640,027 + fliJ OKGIIK_02765 0.35 -0.7
640,027 + fliJ OKGIIK_02765 0.35 -0.2
640,028 - fliJ OKGIIK_02765 0.35 -1.0
640,028 - fliJ OKGIIK_02765 0.35 -0.3
640,028 - fliJ OKGIIK_02765 0.35 -0.3
640,028 - fliJ OKGIIK_02765 0.35 -2.1
640,028 - fliJ OKGIIK_02765 0.35 -1.3
640,518 + OKGIIK_02770 0.14 -0.5
640,518 + OKGIIK_02770 0.14 -1.3
640,518 + OKGIIK_02770 0.14 -1.0
640,519 - OKGIIK_02770 0.14 +0.0
640,519 - OKGIIK_02770 0.14 -0.3
640,519 - OKGIIK_02770 0.14 -2.7
640,519 - OKGIIK_02770 0.14 -1.0
640,519 - OKGIIK_02770 0.14 -0.7
640,519 - OKGIIK_02770 0.14 -0.3
640,519 - OKGIIK_02770 0.14 -1.5
640,519 - OKGIIK_02770 0.14 +0.6
640,519 - OKGIIK_02770 0.14 -0.8
640,519 - OKGIIK_02770 0.14 +0.2
640,519 - OKGIIK_02770 0.14 -1.4
640,519 - OKGIIK_02770 0.14 +0.0
640,519 - OKGIIK_02770 0.14 +0.3
640,519 - OKGIIK_02770 0.14 +0.6

Or see this region's nucleotide sequence