Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_02015 and dxs are separated by 279 nucleotides dxs and mcrA are separated by 103 nucleotides mcrA and OKGIIK_02030 are separated by 242 nucleotides
OKGIIK_02015: OKGIIK_02015 - Release factor glutamine methyltransferase, at 464,320 to 465,147
_02015
OKGIIK_02020: dxs - 1-deoxy-D-xylulose-5-phosphate synthase, at 465,427 to 467,316
dxs
OKGIIK_02025: mcrA - HNH endonuclease, at 467,420 to 468,031
mcrA
OKGIIK_02030: OKGIIK_02030 - Multidrug transporter, at 468,274 to 469,053
_02030
Position (kb) 465
466
467
468 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 465.145 kb on + strand at 465.145 kb on + strand at 465.145 kb on + strand at 465.146 kb on - strand at 465.146 kb on - strand at 465.255 kb on + strand at 465.255 kb on + strand at 465.255 kb on + strand at 465.255 kb on + strand at 465.255 kb on + strand at 465.411 kb on + strand at 465.411 kb on + strand at 465.412 kb on - strand at 465.412 kb on - strand at 465.412 kb on - strand at 467.322 kb on + strand at 467.322 kb on + strand at 467.323 kb on - strand at 467.323 kb on - strand at 467.323 kb on - strand at 467.323 kb on - strand at 467.323 kb on - strand at 467.481 kb on + strand at 467.544 kb on + strand, within mcrA at 467.584 kb on + strand, within mcrA at 467.584 kb on + strand, within mcrA at 467.585 kb on - strand, within mcrA at 467.585 kb on - strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.715 kb on + strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.716 kb on - strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.919 kb on + strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 467.920 kb on - strand, within mcrA at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.033 kb on + strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.034 kb on - strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.103 kb on + strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.104 kb on - strand at 468.157 kb on + strand at 468.157 kb on + strand at 468.157 kb on + strand at 468.157 kb on + strand at 468.158 kb on - strand at 468.158 kb on - strand at 468.158 kb on - strand at 468.185 kb on + strand at 468.185 kb on + strand at 468.185 kb on + strand at 468.185 kb on + strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.186 kb on - strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.266 kb on + strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.267 kb on - strand at 468.292 kb on + strand at 468.292 kb on + strand at 468.293 kb on - strand at 468.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 465,145 + -0.0 465,145 + +0.7 465,145 + +0.3 465,146 - +0.3 465,146 - -2.2 465,255 + -0.2 465,255 + -1.5 465,255 + -0.3 465,255 + +1.1 465,255 + -0.5 465,411 + -0.3 465,411 + -0.4 465,412 - +0.9 465,412 - +0.3 465,412 - -0.5 467,322 + -3.0 467,322 + -0.8 467,323 - -2.0 467,323 - +1.0 467,323 - +1.3 467,323 - -0.2 467,323 - +1.9 467,481 + -0.6 467,544 + mcrA OKGIIK_02025 0.20 +1.7 467,584 + mcrA OKGIIK_02025 0.27 -0.8 467,584 + mcrA OKGIIK_02025 0.27 -0.8 467,585 - mcrA OKGIIK_02025 0.27 -0.3 467,585 - mcrA OKGIIK_02025 0.27 +0.7 467,715 + mcrA OKGIIK_02025 0.48 -0.5 467,715 + mcrA OKGIIK_02025 0.48 -0.9 467,715 + mcrA OKGIIK_02025 0.48 -0.0 467,715 + mcrA OKGIIK_02025 0.48 -0.9 467,715 + mcrA OKGIIK_02025 0.48 +2.4 467,715 + mcrA OKGIIK_02025 0.48 -1.0 467,715 + mcrA OKGIIK_02025 0.48 -1.5 467,716 - mcrA OKGIIK_02025 0.48 +1.1 467,716 - mcrA OKGIIK_02025 0.48 +0.2 467,716 - mcrA OKGIIK_02025 0.48 -0.6 467,716 - mcrA OKGIIK_02025 0.48 +1.0 467,716 - mcrA OKGIIK_02025 0.48 +0.2 467,716 - mcrA OKGIIK_02025 0.48 +0.7 467,919 + mcrA OKGIIK_02025 0.82 +0.8 467,919 + mcrA OKGIIK_02025 0.82 -0.3 467,919 + mcrA OKGIIK_02025 0.82 -2.5 467,919 + mcrA OKGIIK_02025 0.82 -0.0 467,919 + mcrA OKGIIK_02025 0.82 -0.8 467,919 + mcrA OKGIIK_02025 0.82 +1.2 467,919 + mcrA OKGIIK_02025 0.82 +0.5 467,919 + mcrA OKGIIK_02025 0.82 -0.6 467,919 + mcrA OKGIIK_02025 0.82 -1.5 467,920 - mcrA OKGIIK_02025 0.82 -1.9 467,920 - mcrA OKGIIK_02025 0.82 -0.7 467,920 - mcrA OKGIIK_02025 0.82 -1.4 467,920 - mcrA OKGIIK_02025 0.82 -0.5 467,920 - mcrA OKGIIK_02025 0.82 +2.1 467,920 - mcrA OKGIIK_02025 0.82 -0.5 467,920 - mcrA OKGIIK_02025 0.82 -0.0 467,920 - mcrA OKGIIK_02025 0.82 -0.1 467,920 - mcrA OKGIIK_02025 0.82 +0.8 467,920 - mcrA OKGIIK_02025 0.82 -0.8 467,920 - mcrA OKGIIK_02025 0.82 +0.2 467,920 - mcrA OKGIIK_02025 0.82 -1.3 468,033 + -1.7 468,033 + -0.6 468,033 + -0.8 468,033 + +1.3 468,033 + -0.8 468,033 + +0.3 468,033 + +1.0 468,033 + +0.3 468,033 + -2.0 468,034 - -1.3 468,034 - +0.1 468,034 - +0.5 468,034 - -0.6 468,034 - +0.5 468,034 - -1.6 468,034 - +0.5 468,034 - +1.5 468,034 - -0.0 468,034 - +0.7 468,034 - +0.5 468,034 - -0.5 468,034 - +0.5 468,034 - -0.5 468,034 - -0.5 468,034 - -0.6 468,034 - +0.2 468,034 - -1.0 468,034 - -0.5 468,034 - -1.5 468,034 - +0.2 468,034 - -0.5 468,034 - +0.4 468,034 - -1.0 468,034 - -1.3 468,034 - -2.3 468,034 - +0.7 468,103 + -1.4 468,103 + +1.0 468,103 + -0.9 468,103 + +1.7 468,103 + +0.1 468,103 + -0.6 468,103 + -0.3 468,103 + -0.2 468,103 + -0.2 468,103 + -0.6 468,103 + -0.4 468,103 + +0.3 468,103 + +0.5 468,103 + +0.5 468,103 + +0.4 468,103 + +0.8 468,103 + +0.0 468,103 + +0.4 468,103 + -1.7 468,104 - -1.0 468,104 - -2.3 468,104 - +0.1 468,104 - -0.8 468,104 - +1.1 468,104 - -0.5 468,104 - +0.4 468,104 - +0.0 468,104 - -1.6 468,104 - -0.3 468,104 - -0.6 468,104 - -2.5 468,104 - -1.0 468,104 - -0.5 468,104 - -0.3 468,104 - -0.3 468,104 - -0.0 468,104 - -0.4 468,157 + -1.3 468,157 + -0.2 468,157 + -0.3 468,157 + +0.6 468,158 - -0.8 468,158 - -0.3 468,158 - -2.6 468,185 + -0.9 468,185 + +0.2 468,185 + +0.2 468,185 + +0.5 468,186 - +0.5 468,186 - +0.2 468,186 - +0.3 468,186 - -1.1 468,186 - +0.4 468,186 - -0.4 468,186 - -1.9 468,186 - -0.3 468,266 + -1.5 468,266 + -0.5 468,266 + +0.8 468,266 + -2.5 468,266 + -1.0 468,266 + +0.3 468,266 + +1.3 468,266 + -0.5 468,266 + +0.7 468,266 + -0.0 468,266 + -0.8 468,266 + +0.2 468,267 - -0.7 468,267 - +0.8 468,267 - +0.5 468,267 - -1.5 468,267 - -1.2 468,267 - -0.3 468,292 + -1.4 468,292 + -2.4 468,293 - -0.6 468,293 - +0.8
Or see this region's nucleotide sequence