Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2618 and GFF2619 are separated by 291 nucleotides GFF2619 and GFF2620 are separated by 81 nucleotides GFF2620 and GFF2621 overlap by 38 nucleotides
GFF2618 - Adenine permease AdeP, at 418,840 to 420,189
GFF2618
GFF2619 - hypothetical protein, at 420,481 to 420,927
GFF2619
GFF2620 - 2-aminoadipate transaminase, at 421,009 to 421,836
GFF2620
GFF2621 - hypothetical protein, at 421,799 to 422,170
GFF2621
Position (kb) 420
421 Strain fitness (log2 ratio) -2
-1
0
1
2 at 419.493 kb on - strand, within GFF2618 at 419.560 kb on + strand, within GFF2618 at 419.561 kb on - strand, within GFF2618 at 419.847 kb on - strand, within GFF2618 at 419.847 kb on - strand, within GFF2618 at 419.870 kb on + strand, within GFF2618 at 419.870 kb on + strand, within GFF2618 at 419.871 kb on - strand, within GFF2618 at 419.871 kb on - strand, within GFF2618 at 419.874 kb on + strand, within GFF2618 at 419.875 kb on - strand, within GFF2618 at 419.875 kb on - strand, within GFF2618 at 419.875 kb on - strand, within GFF2618 at 419.875 kb on - strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.038 kb on + strand, within GFF2618 at 420.039 kb on - strand, within GFF2618 at 420.039 kb on - strand, within GFF2618 at 420.039 kb on - strand, within GFF2618 at 420.039 kb on - strand, within GFF2618 at 420.039 kb on - strand, within GFF2618 at 420.039 kb on - strand, within GFF2618 at 420.039 kb on - strand, within GFF2618 at 420.039 kb on - strand, within GFF2618 at 420.139 kb on + strand at 420.139 kb on + strand at 420.140 kb on - strand at 420.196 kb on + strand at 420.197 kb on - strand at 420.212 kb on + strand at 420.212 kb on + strand at 420.212 kb on + strand at 420.213 kb on - strand at 420.213 kb on - strand at 420.218 kb on + strand at 420.219 kb on - strand at 420.219 kb on - strand at 420.266 kb on + strand at 420.266 kb on + strand at 420.266 kb on + strand at 420.267 kb on - strand at 420.287 kb on + strand at 420.287 kb on + strand at 420.382 kb on + strand at 420.382 kb on + strand at 420.382 kb on + strand at 420.382 kb on + strand at 420.382 kb on + strand at 420.382 kb on + strand at 420.382 kb on + strand at 420.382 kb on + strand at 420.383 kb on - strand at 420.383 kb on - strand at 420.383 kb on - strand at 420.383 kb on - strand at 420.383 kb on - strand at 420.383 kb on - strand at 420.383 kb on - strand at 420.383 kb on - strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.384 kb on + strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.385 kb on - strand at 420.386 kb on + strand at 420.386 kb on + strand at 420.386 kb on + strand at 420.386 kb on + strand at 420.386 kb on + strand at 420.386 kb on + strand at 420.387 kb on - strand at 420.387 kb on - strand at 420.387 kb on - strand at 420.565 kb on + strand, within GFF2619 at 420.648 kb on + strand, within GFF2619 at 420.648 kb on + strand, within GFF2619 at 420.648 kb on + strand, within GFF2619 at 420.648 kb on + strand, within GFF2619 at 420.649 kb on - strand, within GFF2619 at 420.649 kb on - strand, within GFF2619 at 420.649 kb on - strand, within GFF2619 at 420.808 kb on + strand, within GFF2619 at 420.809 kb on - strand, within GFF2619 at 420.953 kb on + strand at 420.997 kb on - strand at 421.309 kb on + strand, within GFF2620 at 421.309 kb on + strand, within GFF2620 at 421.310 kb on - strand, within GFF2620 at 421.310 kb on - strand, within GFF2620 at 421.351 kb on + strand, within GFF2620 at 421.351 kb on + strand, within GFF2620 at 421.351 kb on + strand, within GFF2620 at 421.352 kb on - strand, within GFF2620 at 421.443 kb on + strand, within GFF2620 at 421.473 kb on + strand, within GFF2620 at 421.473 kb on + strand, within GFF2620 at 421.473 kb on + strand, within GFF2620 at 421.473 kb on + strand, within GFF2620 at 421.477 kb on + strand, within GFF2620 at 421.478 kb on - strand, within GFF2620 at 421.478 kb on - strand, within GFF2620 at 421.663 kb on + strand, within GFF2620 at 421.663 kb on + strand, within GFF2620 at 421.664 kb on - strand, within GFF2620 at 421.664 kb on - strand, within GFF2620 at 421.664 kb on - strand, within GFF2620 at 421.664 kb on - strand, within GFF2620 at 421.794 kb on + strand at 421.795 kb on - strand at 421.795 kb on - strand at 421.819 kb on + strand at 421.827 kb on + strand at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.851 kb on + strand, within GFF2621 at 421.852 kb on - strand, within GFF2621 at 421.852 kb on - strand, within GFF2621 at 421.852 kb on - strand, within GFF2621 at 421.852 kb on - strand, within GFF2621
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 419,493 - GFF2618 0.48 +0.0 419,560 + GFF2618 0.53 +0.4 419,561 - GFF2618 0.53 +0.0 419,847 - GFF2618 0.75 -0.3 419,847 - GFF2618 0.75 +0.2 419,870 + GFF2618 0.76 +0.2 419,870 + GFF2618 0.76 -0.4 419,871 - GFF2618 0.76 +0.2 419,871 - GFF2618 0.76 -0.3 419,874 + GFF2618 0.77 -0.5 419,875 - GFF2618 0.77 +0.3 419,875 - GFF2618 0.77 -0.9 419,875 - GFF2618 0.77 -0.7 419,875 - GFF2618 0.77 +0.4 420,038 + GFF2618 0.89 -0.1 420,038 + GFF2618 0.89 +0.4 420,038 + GFF2618 0.89 +1.0 420,038 + GFF2618 0.89 +0.0 420,038 + GFF2618 0.89 -0.1 420,038 + GFF2618 0.89 +0.1 420,038 + GFF2618 0.89 -0.1 420,038 + GFF2618 0.89 -1.0 420,038 + GFF2618 0.89 -0.4 420,038 + GFF2618 0.89 -0.5 420,038 + GFF2618 0.89 -1.3 420,038 + GFF2618 0.89 -0.7 420,038 + GFF2618 0.89 +0.3 420,038 + GFF2618 0.89 -0.2 420,039 - GFF2618 0.89 +0.6 420,039 - GFF2618 0.89 +0.3 420,039 - GFF2618 0.89 +0.2 420,039 - GFF2618 0.89 +0.1 420,039 - GFF2618 0.89 -0.2 420,039 - GFF2618 0.89 +0.7 420,039 - GFF2618 0.89 +0.1 420,039 - GFF2618 0.89 +0.4 420,139 + -0.1 420,139 + +0.4 420,140 - -0.5 420,196 + -1.7 420,197 - +0.4 420,212 + +0.1 420,212 + +0.4 420,212 + +0.1 420,213 - -0.3 420,213 - -1.7 420,218 + -1.3 420,219 - -0.3 420,219 - -0.0 420,266 + -0.2 420,266 + +0.8 420,266 + -0.7 420,267 - +0.2 420,287 + -1.6 420,287 + -0.3 420,382 + -0.2 420,382 + -0.6 420,382 + -0.4 420,382 + -0.3 420,382 + +0.2 420,382 + +0.1 420,382 + -0.8 420,382 + -1.0 420,383 - -0.6 420,383 - +0.2 420,383 - -1.2 420,383 - +0.1 420,383 - -0.8 420,383 - -0.5 420,383 - +0.3 420,383 - +1.0 420,384 + +0.0 420,384 + -0.1 420,384 + -1.2 420,384 + +0.9 420,384 + -1.7 420,384 + +0.7 420,384 + -2.0 420,384 + -0.4 420,384 + +0.3 420,384 + +0.0 420,384 + -0.5 420,384 + +0.2 420,384 + +0.3 420,384 + -0.9 420,384 + -0.6 420,384 + +0.3 420,384 + -0.3 420,384 + +0.1 420,384 + -0.6 420,384 + -0.0 420,384 + +1.3 420,384 + +1.1 420,384 + +0.8 420,384 + +0.2 420,384 + -0.2 420,384 + -0.9 420,384 + +0.8 420,384 + +2.0 420,385 - -0.1 420,385 - -0.9 420,385 - +0.6 420,385 - +0.4 420,385 - -0.3 420,385 - +0.3 420,385 - -0.5 420,385 - -0.3 420,385 - +0.6 420,385 - -0.9 420,385 - -0.7 420,385 - -0.5 420,385 - -1.4 420,385 - -0.1 420,385 - +0.2 420,385 - +0.1 420,385 - -0.6 420,385 - +0.5 420,385 - -0.2 420,385 - -0.4 420,385 - +0.5 420,385 - +0.2 420,385 - +0.6 420,385 - +0.1 420,385 - -0.7 420,385 - -0.3 420,385 - -0.3 420,385 - +0.2 420,385 - +0.4 420,385 - -0.6 420,385 - -0.6 420,385 - -0.9 420,385 - -1.1 420,385 - -0.1 420,385 - +0.4 420,385 - -0.9 420,385 - +0.0 420,385 - +0.6 420,385 - +0.0 420,385 - -0.7 420,386 + +0.2 420,386 + -0.2 420,386 + +0.1 420,386 + -1.2 420,386 + -1.5 420,386 + +0.4 420,387 - -1.0 420,387 - -0.6 420,387 - -0.3 420,565 + GFF2619 0.19 -0.0 420,648 + GFF2619 0.37 -1.2 420,648 + GFF2619 0.37 -0.2 420,648 + GFF2619 0.37 -2.7 420,648 + GFF2619 0.37 +0.5 420,649 - GFF2619 0.38 -0.9 420,649 - GFF2619 0.38 -0.2 420,649 - GFF2619 0.38 -0.0 420,808 + GFF2619 0.73 -0.1 420,809 - GFF2619 0.73 -0.9 420,953 + +0.7 420,997 - -0.4 421,309 + GFF2620 0.36 -1.0 421,309 + GFF2620 0.36 -0.0 421,310 - GFF2620 0.36 -0.2 421,310 - GFF2620 0.36 -1.4 421,351 + GFF2620 0.41 -0.1 421,351 + GFF2620 0.41 +0.2 421,351 + GFF2620 0.41 -0.2 421,352 - GFF2620 0.41 +0.5 421,443 + GFF2620 0.52 -0.6 421,473 + GFF2620 0.56 -0.1 421,473 + GFF2620 0.56 -0.5 421,473 + GFF2620 0.56 -0.5 421,473 + GFF2620 0.56 -1.2 421,477 + GFF2620 0.57 +1.4 421,478 - GFF2620 0.57 -0.8 421,478 - GFF2620 0.57 -0.1 421,663 + GFF2620 0.79 -0.7 421,663 + GFF2620 0.79 +0.6 421,664 - GFF2620 0.79 +0.2 421,664 - GFF2620 0.79 -0.9 421,664 - GFF2620 0.79 -0.9 421,664 - GFF2620 0.79 -0.3 421,794 + +0.4 421,795 - +0.2 421,795 - -0.0 421,819 + +0.8 421,827 + -1.4 421,851 + GFF2621 0.14 -1.8 421,851 + GFF2621 0.14 -1.2 421,851 + GFF2621 0.14 +0.6 421,851 + GFF2621 0.14 -0.6 421,851 + GFF2621 0.14 +0.5 421,851 + GFF2621 0.14 +0.6 421,851 + GFF2621 0.14 +0.4 421,851 + GFF2621 0.14 -0.7 421,851 + GFF2621 0.14 -0.5 421,851 + GFF2621 0.14 -0.1 421,851 + GFF2621 0.14 +0.8 421,851 + GFF2621 0.14 -0.3 421,851 + GFF2621 0.14 +0.6 421,851 + GFF2621 0.14 +0.6 421,852 - GFF2621 0.14 +0.2 421,852 - GFF2621 0.14 +0.0 421,852 - GFF2621 0.14 +1.4 421,852 - GFF2621 0.14 +1.1
Or see this region's nucleotide sequence