Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1399 and GFF1400 overlap by 1 nucleotides GFF1400 and GFF1401 are separated by 45 nucleotides
GFF1399 - Biopolymer transport protein ExbD, at 168,951 to 169,352
GFF1399
GFF1400 - Biopolymer transport protein ExbB, at 169,352 to 170,059
GFF1400
GFF1401 - hypothetical protein, at 170,105 to 170,938
GFF1401
Position (kb) 170
171 Strain fitness (log2 ratio) -2
-1
0
1
2 at 169.139 kb on - strand, within GFF1399 at 169.503 kb on + strand, within GFF1400 at 169.956 kb on + strand, within GFF1400 at 169.957 kb on - strand, within GFF1400 at 169.957 kb on - strand, within GFF1400 at 170.063 kb on + strand at 170.087 kb on - strand at 170.231 kb on - strand, within GFF1401 at 170.845 kb on + strand, within GFF1401 at 170.845 kb on + strand, within GFF1401 at 170.845 kb on + strand, within GFF1401 at 170.845 kb on + strand, within GFF1401 at 170.846 kb on - strand, within GFF1401 at 170.846 kb on - strand, within GFF1401 at 170.846 kb on - strand, within GFF1401 at 170.846 kb on - strand, within GFF1401 at 170.939 kb on + strand at 170.970 kb on - strand at 171.008 kb on + strand at 171.008 kb on + strand at 171.009 kb on - strand at 171.009 kb on - strand at 171.015 kb on - strand at 171.032 kb on - strand at 171.052 kb on + strand at 171.052 kb on + strand at 171.052 kb on + strand at 171.098 kb on + strand at 171.099 kb on - strand at 171.217 kb on - strand at 171.265 kb on - strand at 171.342 kb on - strand at 171.387 kb on + strand at 171.388 kb on - strand at 171.395 kb on - strand at 171.459 kb on + strand at 171.460 kb on - strand at 171.476 kb on - strand at 171.567 kb on + strand at 171.568 kb on - strand at 171.583 kb on + strand at 171.658 kb on - strand at 171.661 kb on - strand at 171.661 kb on - strand at 171.685 kb on + strand at 171.719 kb on + strand at 171.720 kb on - strand at 171.728 kb on + strand at 171.735 kb on + strand at 171.772 kb on + strand at 171.817 kb on + strand at 171.817 kb on + strand at 171.817 kb on + strand at 171.817 kb on + strand at 171.818 kb on - strand at 171.818 kb on - strand at 171.818 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 169,139 - GFF1399 0.47 +0.4 169,503 + GFF1400 0.21 -1.0 169,956 + GFF1400 0.85 -0.2 169,957 - GFF1400 0.85 -0.6 169,957 - GFF1400 0.85 +0.3 170,063 + +0.4 170,087 - -0.5 170,231 - GFF1401 0.15 -0.0 170,845 + GFF1401 0.89 -0.6 170,845 + GFF1401 0.89 -0.6 170,845 + GFF1401 0.89 -0.5 170,845 + GFF1401 0.89 -1.2 170,846 - GFF1401 0.89 +0.2 170,846 - GFF1401 0.89 -1.0 170,846 - GFF1401 0.89 -1.2 170,846 - GFF1401 0.89 +0.4 170,939 + +0.4 170,970 - -0.6 171,008 + +0.4 171,008 + +0.3 171,009 - +0.6 171,009 - -0.5 171,015 - +1.3 171,032 - +2.0 171,052 + +1.0 171,052 + +0.6 171,052 + -2.1 171,098 + -0.6 171,099 - +0.2 171,217 - -0.0 171,265 - -0.1 171,342 - -0.7 171,387 + +0.7 171,388 - -0.0 171,395 - -0.4 171,459 + +0.1 171,460 - -0.6 171,476 - +0.3 171,567 + -1.8 171,568 - +0.9 171,583 + +0.6 171,658 - +1.4 171,661 - -0.4 171,661 - +0.5 171,685 + -1.1 171,719 + -0.6 171,720 - -1.4 171,728 + +0.1 171,735 + +0.2 171,772 + -0.0 171,817 + +1.7 171,817 + +0.5 171,817 + +1.8 171,817 + -0.0 171,818 - -1.2 171,818 - -0.1 171,818 - -0.6
Or see this region's nucleotide sequence