Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_14790 and OKGIIK_14795 are separated by 115 nucleotides OKGIIK_14795 and OKGIIK_14800 are separated by 34 nucleotides OKGIIK_14800 and OKGIIK_14805 overlap by 1 nucleotides
OKGIIK_14790: OKGIIK_14790 - Serine protease, at 3,222,888 to 3,224,192
_14790
OKGIIK_14795: OKGIIK_14795 - Conjugal transfer protein TraR, at 3,224,308 to 3,224,691
_14795
OKGIIK_14800: OKGIIK_14800 - peroxiredoxin, at 3,224,726 to 3,225,238
_14800
OKGIIK_14805: OKGIIK_14805 - Disulfide bond formation protein DsbA, at 3,225,238 to 3,225,786
_14805
Position (kb)
3224
3225 Strain fitness (log2 ratio)
-2
-1
0
1 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.320 kb on + strand, within OKGIIK_14790 at 3223.321 kb on - strand, within OKGIIK_14790 at 3223.321 kb on - strand, within OKGIIK_14790 at 3223.321 kb on - strand, within OKGIIK_14790 at 3223.321 kb on - strand, within OKGIIK_14790 at 3223.329 kb on + strand, within OKGIIK_14790 at 3223.330 kb on - strand, within OKGIIK_14790 at 3223.330 kb on - strand, within OKGIIK_14790 at 3223.330 kb on - strand, within OKGIIK_14790 at 3223.330 kb on - strand, within OKGIIK_14790 at 3223.359 kb on + strand, within OKGIIK_14790 at 3223.359 kb on + strand, within OKGIIK_14790 at 3223.359 kb on + strand, within OKGIIK_14790 at 3223.359 kb on + strand, within OKGIIK_14790 at 3223.360 kb on - strand, within OKGIIK_14790 at 3223.360 kb on - strand, within OKGIIK_14790 at 3223.360 kb on - strand, within OKGIIK_14790 at 3223.360 kb on - strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.371 kb on + strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.372 kb on - strand, within OKGIIK_14790 at 3223.651 kb on - strand, within OKGIIK_14790 at 3223.651 kb on - strand, within OKGIIK_14790 at 3223.943 kb on + strand, within OKGIIK_14790 at 3223.943 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.989 kb on + strand, within OKGIIK_14790 at 3223.990 kb on - strand, within OKGIIK_14790 at 3223.990 kb on - strand, within OKGIIK_14790 at 3223.990 kb on - strand, within OKGIIK_14790 at 3223.990 kb on - strand, within OKGIIK_14790 at 3223.990 kb on - strand, within OKGIIK_14790 at 3223.990 kb on - strand, within OKGIIK_14790 at 3223.990 kb on - strand, within OKGIIK_14790 at 3224.101 kb on + strand at 3224.101 kb on + strand at 3224.101 kb on + strand at 3224.101 kb on + strand at 3224.102 kb on - strand at 3224.236 kb on + strand at 3224.266 kb on + strand at 3224.266 kb on + strand at 3224.267 kb on - strand at 3224.581 kb on + strand, within OKGIIK_14795 at 3224.582 kb on - strand, within OKGIIK_14795 at 3224.582 kb on - strand, within OKGIIK_14795 at 3224.582 kb on - strand, within OKGIIK_14795 at 3224.582 kb on - strand, within OKGIIK_14795 at 3224.582 kb on - strand, within OKGIIK_14795 at 3224.838 kb on - strand, within OKGIIK_14800 at 3224.882 kb on + strand, within OKGIIK_14800 at 3224.882 kb on + strand, within OKGIIK_14800 at 3224.882 kb on + strand, within OKGIIK_14800 at 3224.882 kb on + strand, within OKGIIK_14800 at 3224.882 kb on + strand, within OKGIIK_14800 at 3224.883 kb on - strand, within OKGIIK_14800 at 3224.883 kb on - strand, within OKGIIK_14800 at 3224.883 kb on - strand, within OKGIIK_14800 at 3224.883 kb on - strand, within OKGIIK_14800 at 3224.883 kb on - strand, within OKGIIK_14800 at 3224.883 kb on - strand, within OKGIIK_14800 at 3224.984 kb on + strand, within OKGIIK_14800 at 3224.984 kb on + strand, within OKGIIK_14800 at 3224.984 kb on + strand, within OKGIIK_14800 at 3224.984 kb on + strand, within OKGIIK_14800 at 3224.984 kb on + strand, within OKGIIK_14800 at 3224.984 kb on + strand, within OKGIIK_14800 at 3224.984 kb on + strand, within OKGIIK_14800 at 3224.985 kb on - strand, within OKGIIK_14800 at 3224.985 kb on - strand, within OKGIIK_14800 at 3224.985 kb on - strand, within OKGIIK_14800 at 3224.985 kb on - strand, within OKGIIK_14800 at 3225.039 kb on - strand, within OKGIIK_14800 at 3225.047 kb on + strand, within OKGIIK_14800 at 3225.047 kb on + strand, within OKGIIK_14800 at 3225.047 kb on + strand, within OKGIIK_14800 at 3225.047 kb on - strand, within OKGIIK_14800 at 3225.048 kb on - strand, within OKGIIK_14800 at 3225.048 kb on - strand, within OKGIIK_14800 at 3225.048 kb on - strand, within OKGIIK_14800 at 3225.119 kb on + strand, within OKGIIK_14800 at 3225.119 kb on + strand, within OKGIIK_14800 at 3225.119 kb on + strand, within OKGIIK_14800 at 3225.120 kb on - strand, within OKGIIK_14800 at 3225.120 kb on - strand, within OKGIIK_14800 at 3225.120 kb on - strand, within OKGIIK_14800 at 3225.120 kb on - strand, within OKGIIK_14800 at 3225.120 kb on - strand, within OKGIIK_14800 at 3225.120 kb on - strand, within OKGIIK_14800 at 3225.120 kb on - strand, within OKGIIK_14800 at 3225.120 kb on - strand, within OKGIIK_14800 at 3225.328 kb on + strand, within OKGIIK_14805 at 3225.328 kb on + strand, within OKGIIK_14805 at 3225.394 kb on + strand, within OKGIIK_14805 at 3225.395 kb on - strand, within OKGIIK_14805 at 3225.451 kb on + strand, within OKGIIK_14805 at 3225.451 kb on + strand, within OKGIIK_14805 at 3225.526 kb on + strand, within OKGIIK_14805 at 3225.526 kb on + strand, within OKGIIK_14805 at 3225.526 kb on + strand, within OKGIIK_14805 at 3225.526 kb on + strand, within OKGIIK_14805 at 3225.526 kb on + strand, within OKGIIK_14805 at 3225.527 kb on - strand, within OKGIIK_14805 at 3225.527 kb on - strand, within OKGIIK_14805
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 3,223,320 + OKGIIK_14790 0.33 -0.4 3,223,320 + OKGIIK_14790 0.33 -0.6 3,223,320 + OKGIIK_14790 0.33 +0.2 3,223,320 + OKGIIK_14790 0.33 -0.0 3,223,320 + OKGIIK_14790 0.33 -0.8 3,223,321 - OKGIIK_14790 0.33 -0.1 3,223,321 - OKGIIK_14790 0.33 +0.7 3,223,321 - OKGIIK_14790 0.33 +0.2 3,223,321 - OKGIIK_14790 0.33 +0.6 3,223,329 + OKGIIK_14790 0.34 -1.4 3,223,330 - OKGIIK_14790 0.34 -2.5 3,223,330 - OKGIIK_14790 0.34 -2.0 3,223,330 - OKGIIK_14790 0.34 -0.3 3,223,330 - OKGIIK_14790 0.34 -0.9 3,223,359 + OKGIIK_14790 0.36 -0.3 3,223,359 + OKGIIK_14790 0.36 -0.3 3,223,359 + OKGIIK_14790 0.36 -1.6 3,223,359 + OKGIIK_14790 0.36 -0.4 3,223,360 - OKGIIK_14790 0.36 +0.8 3,223,360 - OKGIIK_14790 0.36 -0.8 3,223,360 - OKGIIK_14790 0.36 +0.4 3,223,360 - OKGIIK_14790 0.36 -1.1 3,223,371 + OKGIIK_14790 0.37 -0.8 3,223,371 + OKGIIK_14790 0.37 +1.1 3,223,371 + OKGIIK_14790 0.37 -0.2 3,223,371 + OKGIIK_14790 0.37 -1.0 3,223,371 + OKGIIK_14790 0.37 -0.8 3,223,371 + OKGIIK_14790 0.37 +0.1 3,223,371 + OKGIIK_14790 0.37 +0.8 3,223,372 - OKGIIK_14790 0.37 +0.1 3,223,372 - OKGIIK_14790 0.37 -1.4 3,223,372 - OKGIIK_14790 0.37 +0.4 3,223,372 - OKGIIK_14790 0.37 -2.3 3,223,372 - OKGIIK_14790 0.37 +0.2 3,223,372 - OKGIIK_14790 0.37 -1.6 3,223,651 - OKGIIK_14790 0.58 -0.8 3,223,651 - OKGIIK_14790 0.58 -1.1 3,223,943 + OKGIIK_14790 0.81 -1.9 3,223,943 + OKGIIK_14790 0.81 +1.4 3,223,989 + OKGIIK_14790 0.84 -1.1 3,223,989 + OKGIIK_14790 0.84 -1.3 3,223,989 + OKGIIK_14790 0.84 +1.6 3,223,989 + OKGIIK_14790 0.84 -2.5 3,223,989 + OKGIIK_14790 0.84 -0.0 3,223,989 + OKGIIK_14790 0.84 +1.2 3,223,989 + OKGIIK_14790 0.84 +1.2 3,223,989 + OKGIIK_14790 0.84 -1.4 3,223,989 + OKGIIK_14790 0.84 +0.2 3,223,989 + OKGIIK_14790 0.84 -2.0 3,223,989 + OKGIIK_14790 0.84 -0.3 3,223,990 - OKGIIK_14790 0.84 +1.5 3,223,990 - OKGIIK_14790 0.84 +0.4 3,223,990 - OKGIIK_14790 0.84 +0.2 3,223,990 - OKGIIK_14790 0.84 +0.3 3,223,990 - OKGIIK_14790 0.84 -0.1 3,223,990 - OKGIIK_14790 0.84 -0.6 3,223,990 - OKGIIK_14790 0.84 +0.8 3,224,101 + -0.3 3,224,101 + +0.9 3,224,101 + -1.6 3,224,101 + +0.2 3,224,102 - +0.8 3,224,236 + -0.3 3,224,266 + -1.1 3,224,266 + -0.9 3,224,267 - -1.1 3,224,581 + OKGIIK_14795 0.71 +0.1 3,224,582 - OKGIIK_14795 0.71 -0.1 3,224,582 - OKGIIK_14795 0.71 -2.0 3,224,582 - OKGIIK_14795 0.71 -0.7 3,224,582 - OKGIIK_14795 0.71 +0.2 3,224,582 - OKGIIK_14795 0.71 -0.4 3,224,838 - OKGIIK_14800 0.22 -0.7 3,224,882 + OKGIIK_14800 0.30 -1.4 3,224,882 + OKGIIK_14800 0.30 -0.4 3,224,882 + OKGIIK_14800 0.30 +0.0 3,224,882 + OKGIIK_14800 0.30 +0.2 3,224,882 + OKGIIK_14800 0.30 +0.9 3,224,883 - OKGIIK_14800 0.31 +0.0 3,224,883 - OKGIIK_14800 0.31 -1.4 3,224,883 - OKGIIK_14800 0.31 -0.8 3,224,883 - OKGIIK_14800 0.31 -0.7 3,224,883 - OKGIIK_14800 0.31 -0.1 3,224,883 - OKGIIK_14800 0.31 +0.3 3,224,984 + OKGIIK_14800 0.50 -1.8 3,224,984 + OKGIIK_14800 0.50 -2.1 3,224,984 + OKGIIK_14800 0.50 -0.0 3,224,984 + OKGIIK_14800 0.50 -0.1 3,224,984 + OKGIIK_14800 0.50 +0.4 3,224,984 + OKGIIK_14800 0.50 +1.2 3,224,984 + OKGIIK_14800 0.50 -0.8 3,224,985 - OKGIIK_14800 0.50 +0.9 3,224,985 - OKGIIK_14800 0.50 -0.3 3,224,985 - OKGIIK_14800 0.50 -0.8 3,224,985 - OKGIIK_14800 0.50 -0.4 3,225,039 - OKGIIK_14800 0.61 +1.1 3,225,047 + OKGIIK_14800 0.63 -1.3 3,225,047 + OKGIIK_14800 0.63 -0.5 3,225,047 + OKGIIK_14800 0.63 -0.8 3,225,047 - OKGIIK_14800 0.63 -0.1 3,225,048 - OKGIIK_14800 0.63 +1.0 3,225,048 - OKGIIK_14800 0.63 -0.8 3,225,048 - OKGIIK_14800 0.63 +0.4 3,225,119 + OKGIIK_14800 0.77 +0.1 3,225,119 + OKGIIK_14800 0.77 +0.7 3,225,119 + OKGIIK_14800 0.77 -0.0 3,225,120 - OKGIIK_14800 0.77 -0.8 3,225,120 - OKGIIK_14800 0.77 -1.0 3,225,120 - OKGIIK_14800 0.77 -0.7 3,225,120 - OKGIIK_14800 0.77 +0.6 3,225,120 - OKGIIK_14800 0.77 +0.6 3,225,120 - OKGIIK_14800 0.77 +0.1 3,225,120 - OKGIIK_14800 0.77 -0.6 3,225,120 - OKGIIK_14800 0.77 +1.2 3,225,328 + OKGIIK_14805 0.16 +0.7 3,225,328 + OKGIIK_14805 0.16 -0.8 3,225,394 + OKGIIK_14805 0.28 +1.5 3,225,395 - OKGIIK_14805 0.29 -1.4 3,225,451 + OKGIIK_14805 0.39 +0.5 3,225,451 + OKGIIK_14805 0.39 -0.2 3,225,526 + OKGIIK_14805 0.52 +0.4 3,225,526 + OKGIIK_14805 0.52 +0.4 3,225,526 + OKGIIK_14805 0.52 -0.7 3,225,526 + OKGIIK_14805 0.52 -0.3 3,225,526 + OKGIIK_14805 0.52 -0.6 3,225,527 - OKGIIK_14805 0.53 -0.8 3,225,527 - OKGIIK_14805 0.53 -1.6
Or see this region's nucleotide sequence