Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_10800 and abrB overlap by 4 nucleotides abrB and OKGIIK_10810 are separated by 360 nucleotides OKGIIK_10810 and OKGIIK_10815 overlap by 4 nucleotides OKGIIK_10815 and pilB are separated by 523 nucleotides
OKGIIK_10800: OKGIIK_10800 - VapC toxin family PIN domain ribonuclease, at 2,315,955 to 2,316,350
_10800
OKGIIK_10805: abrB - AbrB family transcriptional regulator, at 2,316,347 to 2,316,589
abrB
OKGIIK_10810: OKGIIK_10810 - DNA-binding protein, at 2,316,950 to 2,317,345
_10810
OKGIIK_10815: OKGIIK_10815 - SpoVT-AbrB domain-containing protein, at 2,317,342 to 2,317,689
_10815
OKGIIK_10820: pilB - type IV-A pilus assembly ATPase PilB, at 2,318,213 to 2,319,865
pilB
Position (kb)
2317
2318 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2316.471 kb on + strand, within abrB at 2316.471 kb on + strand, within abrB at 2316.571 kb on + strand at 2316.572 kb on - strand at 2316.611 kb on + strand at 2316.612 kb on - strand at 2316.612 kb on - strand at 2316.621 kb on + strand at 2316.629 kb on + strand at 2316.629 kb on + strand at 2316.630 kb on - strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.648 kb on + strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.649 kb on - strand at 2316.667 kb on + strand at 2316.667 kb on + strand at 2316.668 kb on - strand at 2316.668 kb on - strand at 2316.668 kb on - strand at 2316.668 kb on - strand at 2316.768 kb on + strand at 2316.769 kb on - strand at 2316.829 kb on + strand at 2316.829 kb on + strand at 2316.830 kb on - strand at 2316.830 kb on - strand at 2316.830 kb on - strand at 2316.830 kb on - strand at 2316.837 kb on + strand at 2316.837 kb on + strand at 2316.837 kb on + strand at 2316.837 kb on + strand at 2316.837 kb on + strand at 2316.837 kb on + strand at 2316.838 kb on - strand at 2316.838 kb on - strand at 2316.838 kb on - strand at 2316.838 kb on - strand at 2316.838 kb on - strand at 2316.838 kb on - strand at 2316.953 kb on + strand at 2316.953 kb on + strand at 2316.954 kb on - strand at 2316.954 kb on - strand at 2316.954 kb on - strand at 2316.954 kb on - strand at 2316.954 kb on - strand at 2316.954 kb on - strand at 2317.013 kb on + strand, within OKGIIK_10810 at 2317.013 kb on + strand, within OKGIIK_10810 at 2317.013 kb on + strand, within OKGIIK_10810 at 2317.013 kb on + strand, within OKGIIK_10810 at 2317.014 kb on - strand, within OKGIIK_10810 at 2317.014 kb on - strand, within OKGIIK_10810 at 2317.014 kb on - strand, within OKGIIK_10810 at 2317.021 kb on + strand, within OKGIIK_10810 at 2317.021 kb on + strand, within OKGIIK_10810 at 2317.021 kb on + strand, within OKGIIK_10810 at 2317.022 kb on - strand, within OKGIIK_10810 at 2317.022 kb on - strand, within OKGIIK_10810 at 2317.022 kb on - strand, within OKGIIK_10810 at 2317.022 kb on - strand, within OKGIIK_10810 at 2317.128 kb on + strand, within OKGIIK_10810 at 2317.129 kb on + strand, within OKGIIK_10810 at 2317.129 kb on + strand, within OKGIIK_10810 at 2317.129 kb on + strand, within OKGIIK_10810 at 2317.129 kb on + strand, within OKGIIK_10810 at 2317.129 kb on + strand, within OKGIIK_10810 at 2317.129 kb on + strand, within OKGIIK_10810 at 2317.130 kb on - strand, within OKGIIK_10810 at 2317.130 kb on - strand, within OKGIIK_10810 at 2317.130 kb on - strand, within OKGIIK_10810 at 2317.187 kb on + strand, within OKGIIK_10810 at 2317.188 kb on + strand, within OKGIIK_10810 at 2317.188 kb on + strand, within OKGIIK_10810 at 2317.188 kb on + strand, within OKGIIK_10810 at 2317.188 kb on + strand, within OKGIIK_10810 at 2317.189 kb on - strand, within OKGIIK_10810 at 2317.189 kb on - strand, within OKGIIK_10810 at 2317.431 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.585 kb on + strand, within OKGIIK_10815 at 2317.586 kb on - strand, within OKGIIK_10815 at 2317.586 kb on - strand, within OKGIIK_10815 at 2317.586 kb on - strand, within OKGIIK_10815 at 2317.586 kb on - strand, within OKGIIK_10815 at 2317.586 kb on - strand, within OKGIIK_10815 at 2317.586 kb on - strand, within OKGIIK_10815 at 2317.586 kb on - strand, within OKGIIK_10815 at 2317.586 kb on - strand, within OKGIIK_10815 at 2317.622 kb on - strand, within OKGIIK_10815 at 2317.628 kb on + strand, within OKGIIK_10815 at 2317.735 kb on + strand at 2317.735 kb on + strand at 2317.735 kb on + strand at 2317.735 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.776 kb on + strand at 2317.777 kb on - strand at 2317.777 kb on - strand at 2317.777 kb on - strand at 2317.777 kb on - strand at 2317.777 kb on - strand at 2317.777 kb on - strand at 2317.895 kb on + strand at 2317.895 kb on + strand at 2317.896 kb on - strand at 2318.103 kb on + strand at 2318.104 kb on - strand at 2318.104 kb on - strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.117 kb on + strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.118 kb on - strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.140 kb on + strand at 2318.141 kb on - strand at 2318.141 kb on - strand at 2318.141 kb on - strand at 2318.141 kb on - strand at 2318.141 kb on - strand at 2318.141 kb on - strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.182 kb on + strand at 2318.183 kb on - strand at 2318.183 kb on - strand at 2318.183 kb on - strand at 2318.183 kb on - strand at 2318.183 kb on - strand at 2318.183 kb on - strand at 2318.183 kb on - strand at 2318.183 kb on - strand at 2318.183 kb on - strand at 2318.352 kb on + strand at 2318.353 kb on - strand at 2318.353 kb on - strand at 2318.353 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,316,471 + abrB OKGIIK_10805 0.51 +0.0 2,316,471 + abrB OKGIIK_10805 0.51 +0.2 2,316,571 + +0.1 2,316,572 - +0.6 2,316,611 + +0.4 2,316,612 - -1.1 2,316,612 - -1.1 2,316,621 + +0.8 2,316,629 + +0.3 2,316,629 + -0.3 2,316,630 - -0.3 2,316,648 + +0.8 2,316,648 + +1.5 2,316,648 + +0.3 2,316,648 + +0.6 2,316,648 + +0.4 2,316,648 + -0.1 2,316,648 + -0.9 2,316,648 + +1.1 2,316,648 + +1.1 2,316,648 + +0.7 2,316,648 + -0.1 2,316,648 + +0.2 2,316,648 + +0.0 2,316,648 + -0.5 2,316,648 + -0.2 2,316,649 - -1.8 2,316,649 - +0.1 2,316,649 - -2.7 2,316,649 - +0.2 2,316,649 - -0.5 2,316,649 - +1.5 2,316,649 - -0.1 2,316,649 - -0.8 2,316,649 - +1.3 2,316,649 - -0.5 2,316,649 - -1.3 2,316,649 - +0.1 2,316,649 - -0.6 2,316,649 - -0.3 2,316,649 - +1.0 2,316,649 - -3.3 2,316,649 - -0.3 2,316,649 - -0.1 2,316,649 - +0.3 2,316,649 - +1.5 2,316,667 + -1.1 2,316,667 + -0.1 2,316,668 - -2.3 2,316,668 - +1.0 2,316,668 - +0.2 2,316,668 - -0.5 2,316,768 + -0.7 2,316,769 - +0.1 2,316,829 + +0.9 2,316,829 + +0.5 2,316,830 - -0.1 2,316,830 - -0.8 2,316,830 - +0.7 2,316,830 - +1.0 2,316,837 + -1.0 2,316,837 + +0.7 2,316,837 + -1.2 2,316,837 + +1.3 2,316,837 + -1.1 2,316,837 + +0.5 2,316,838 - -0.8 2,316,838 - +0.5 2,316,838 - +0.4 2,316,838 - +0.7 2,316,838 - -0.7 2,316,838 - +0.5 2,316,953 + +2.3 2,316,953 + -0.7 2,316,954 - +0.5 2,316,954 - -0.4 2,316,954 - -1.3 2,316,954 - -0.8 2,316,954 - -0.1 2,316,954 - +0.3 2,317,013 + OKGIIK_10810 0.16 -3.2 2,317,013 + OKGIIK_10810 0.16 -0.2 2,317,013 + OKGIIK_10810 0.16 -1.7 2,317,013 + OKGIIK_10810 0.16 -0.8 2,317,014 - OKGIIK_10810 0.16 -0.3 2,317,014 - OKGIIK_10810 0.16 -0.8 2,317,014 - OKGIIK_10810 0.16 -0.3 2,317,021 + OKGIIK_10810 0.18 +0.3 2,317,021 + OKGIIK_10810 0.18 -1.1 2,317,021 + OKGIIK_10810 0.18 +2.0 2,317,022 - OKGIIK_10810 0.18 +0.0 2,317,022 - OKGIIK_10810 0.18 -0.9 2,317,022 - OKGIIK_10810 0.18 -0.9 2,317,022 - OKGIIK_10810 0.18 -0.1 2,317,128 + OKGIIK_10810 0.45 +0.2 2,317,129 + OKGIIK_10810 0.45 +0.8 2,317,129 + OKGIIK_10810 0.45 -0.4 2,317,129 + OKGIIK_10810 0.45 -0.1 2,317,129 + OKGIIK_10810 0.45 +0.2 2,317,129 + OKGIIK_10810 0.45 +1.5 2,317,129 + OKGIIK_10810 0.45 -1.7 2,317,130 - OKGIIK_10810 0.45 +1.2 2,317,130 - OKGIIK_10810 0.45 -0.6 2,317,130 - OKGIIK_10810 0.45 +0.0 2,317,187 + OKGIIK_10810 0.60 +0.5 2,317,188 + OKGIIK_10810 0.60 -1.3 2,317,188 + OKGIIK_10810 0.60 -0.5 2,317,188 + OKGIIK_10810 0.60 -1.1 2,317,188 + OKGIIK_10810 0.60 +0.2 2,317,189 - OKGIIK_10810 0.60 +0.7 2,317,189 - OKGIIK_10810 0.60 -1.5 2,317,431 + OKGIIK_10815 0.26 +0.3 2,317,585 + OKGIIK_10815 0.70 +1.2 2,317,585 + OKGIIK_10815 0.70 -0.8 2,317,585 + OKGIIK_10815 0.70 +0.5 2,317,585 + OKGIIK_10815 0.70 -0.1 2,317,585 + OKGIIK_10815 0.70 -1.1 2,317,585 + OKGIIK_10815 0.70 -0.6 2,317,585 + OKGIIK_10815 0.70 -1.4 2,317,585 + OKGIIK_10815 0.70 +0.0 2,317,585 + OKGIIK_10815 0.70 -0.8 2,317,585 + OKGIIK_10815 0.70 -0.4 2,317,585 + OKGIIK_10815 0.70 -1.3 2,317,585 + OKGIIK_10815 0.70 -0.7 2,317,585 + OKGIIK_10815 0.70 +0.7 2,317,585 + OKGIIK_10815 0.70 +0.6 2,317,585 + OKGIIK_10815 0.70 -0.1 2,317,586 - OKGIIK_10815 0.70 +1.9 2,317,586 - OKGIIK_10815 0.70 +0.5 2,317,586 - OKGIIK_10815 0.70 -1.3 2,317,586 - OKGIIK_10815 0.70 -0.8 2,317,586 - OKGIIK_10815 0.70 -1.2 2,317,586 - OKGIIK_10815 0.70 -0.0 2,317,586 - OKGIIK_10815 0.70 -0.7 2,317,586 - OKGIIK_10815 0.70 -1.5 2,317,622 - OKGIIK_10815 0.80 +1.2 2,317,628 + OKGIIK_10815 0.82 -2.0 2,317,735 + -0.7 2,317,735 + -1.1 2,317,735 + -1.1 2,317,735 + -1.7 2,317,776 + -0.5 2,317,776 + -0.1 2,317,776 + +0.7 2,317,776 + -0.3 2,317,776 + -0.5 2,317,776 + -2.0 2,317,776 + +1.1 2,317,776 + -0.8 2,317,776 + -2.6 2,317,776 + -1.5 2,317,776 + -0.4 2,317,776 + +0.7 2,317,776 + -0.5 2,317,777 - -3.0 2,317,777 - -0.3 2,317,777 - -1.1 2,317,777 - -0.0 2,317,777 - -0.8 2,317,777 - -0.4 2,317,895 + +0.8 2,317,895 + +0.5 2,317,896 - -0.0 2,318,103 + +0.5 2,318,104 - -0.5 2,318,104 - -0.2 2,318,117 + +0.5 2,318,117 + -0.8 2,318,117 + +0.5 2,318,117 + -0.1 2,318,117 + +0.7 2,318,117 + +0.1 2,318,117 + -0.5 2,318,117 + +0.7 2,318,117 + +0.3 2,318,117 + -2.2 2,318,117 + -1.3 2,318,117 + -0.2 2,318,117 + +0.3 2,318,117 + +0.1 2,318,117 + -1.1 2,318,117 + +1.2 2,318,117 + -0.3 2,318,117 + +0.3 2,318,118 - +1.5 2,318,118 - -0.5 2,318,118 - -0.6 2,318,118 - +0.9 2,318,118 - +0.3 2,318,118 - +1.2 2,318,118 - -0.6 2,318,118 - -0.5 2,318,118 - +0.4 2,318,118 - -0.4 2,318,118 - +0.8 2,318,118 - +0.2 2,318,118 - -0.0 2,318,118 - +0.7 2,318,118 - +0.7 2,318,118 - -1.3 2,318,118 - +0.3 2,318,118 - -0.7 2,318,118 - +1.1 2,318,118 - +0.1 2,318,118 - +0.4 2,318,118 - +0.3 2,318,118 - -1.3 2,318,118 - +0.5 2,318,118 - -0.3 2,318,140 + +0.4 2,318,140 + +0.7 2,318,140 + +1.7 2,318,140 + +0.7 2,318,140 + +0.2 2,318,140 + +0.0 2,318,140 + -1.1 2,318,140 + -2.1 2,318,140 + +1.0 2,318,140 + +0.4 2,318,140 + -0.7 2,318,140 + -0.1 2,318,141 - -1.0 2,318,141 - +0.5 2,318,141 - +0.2 2,318,141 - -0.8 2,318,141 - -1.6 2,318,141 - -0.5 2,318,182 + +1.0 2,318,182 + -0.3 2,318,182 + -1.7 2,318,182 + -0.2 2,318,182 + +0.2 2,318,182 + -0.7 2,318,182 + +0.1 2,318,182 + -0.3 2,318,182 + +0.2 2,318,182 + +0.1 2,318,182 + -0.2 2,318,182 + +0.1 2,318,182 + +0.5 2,318,182 + -1.6 2,318,182 + +0.5 2,318,182 + +0.1 2,318,182 + -1.5 2,318,182 + +0.7 2,318,182 + +0.2 2,318,183 - -0.1 2,318,183 - -0.5 2,318,183 - +0.8 2,318,183 - -0.7 2,318,183 - +0.3 2,318,183 - +0.7 2,318,183 - +1.7 2,318,183 - -1.4 2,318,183 - +0.5 2,318,352 + -0.2 2,318,353 - +0.1 2,318,353 - -0.5 2,318,353 - +1.5
Or see this region's nucleotide sequence