Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt asnS and OKGIIK_09615 are separated by 14 nucleotides OKGIIK_09615 and OKGIIK_09620 overlap by 4 nucleotides OKGIIK_09620 and fabG are separated by 19 nucleotides
OKGIIK_09610: asnS - asparagine--tRNA ligase, at 2,078,908 to 2,080,308
asnS
OKGIIK_09615: OKGIIK_09615 - Maltose operon periplasmic protein precursor (MalM), at 2,080,323 to 2,081,147
_09615
OKGIIK_09620: OKGIIK_09620 - hypothetical protein, at 2,081,144 to 2,081,458
_09620
OKGIIK_09625: fabG - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 2,081,478 to 2,082,269
fabG
Position (kb)
2080
2081
2082 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.599 kb on + strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.600 kb on - strand, within OKGIIK_09615 at 2080.692 kb on + strand, within OKGIIK_09615 at 2080.692 kb on + strand, within OKGIIK_09615 at 2080.692 kb on + strand, within OKGIIK_09615 at 2080.692 kb on + strand, within OKGIIK_09615 at 2080.693 kb on - strand, within OKGIIK_09615 at 2080.693 kb on - strand, within OKGIIK_09615 at 2080.693 kb on - strand, within OKGIIK_09615 at 2080.693 kb on - strand, within OKGIIK_09615 at 2080.693 kb on - strand, within OKGIIK_09615 at 2080.693 kb on - strand, within OKGIIK_09615 at 2080.839 kb on + strand, within OKGIIK_09615 at 2080.839 kb on + strand, within OKGIIK_09615 at 2080.839 kb on + strand, within OKGIIK_09615 at 2080.839 kb on + strand, within OKGIIK_09615 at 2080.840 kb on - strand, within OKGIIK_09615 at 2080.840 kb on - strand, within OKGIIK_09615 at 2080.851 kb on + strand, within OKGIIK_09615 at 2080.851 kb on + strand, within OKGIIK_09615 at 2080.851 kb on + strand, within OKGIIK_09615 at 2080.851 kb on + strand, within OKGIIK_09615 at 2080.851 kb on + strand, within OKGIIK_09615 at 2080.851 kb on + strand, within OKGIIK_09615 at 2080.851 kb on + strand, within OKGIIK_09615 at 2080.852 kb on - strand, within OKGIIK_09615 at 2080.852 kb on - strand, within OKGIIK_09615 at 2080.852 kb on - strand, within OKGIIK_09615 at 2080.852 kb on - strand, within OKGIIK_09615 at 2080.852 kb on - strand, within OKGIIK_09615 at 2080.852 kb on - strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.884 kb on + strand, within OKGIIK_09615 at 2080.885 kb on - strand, within OKGIIK_09615 at 2080.885 kb on - strand, within OKGIIK_09615 at 2080.885 kb on - strand, within OKGIIK_09615 at 2081.013 kb on + strand, within OKGIIK_09615 at 2081.013 kb on + strand, within OKGIIK_09615 at 2081.013 kb on + strand, within OKGIIK_09615 at 2081.013 kb on + strand, within OKGIIK_09615 at 2081.014 kb on - strand, within OKGIIK_09615 at 2081.156 kb on + strand at 2081.156 kb on + strand at 2081.156 kb on + strand at 2081.156 kb on + strand at 2081.156 kb on + strand at 2081.157 kb on - strand at 2081.157 kb on - strand at 2081.157 kb on - strand at 2081.157 kb on - strand at 2081.157 kb on - strand at 2081.201 kb on + strand, within OKGIIK_09620 at 2081.201 kb on + strand, within OKGIIK_09620 at 2081.201 kb on + strand, within OKGIIK_09620 at 2081.201 kb on + strand, within OKGIIK_09620 at 2081.202 kb on - strand, within OKGIIK_09620 at 2081.202 kb on - strand, within OKGIIK_09620 at 2081.202 kb on - strand, within OKGIIK_09620 at 2081.202 kb on - strand, within OKGIIK_09620 at 2081.202 kb on - strand, within OKGIIK_09620 at 2081.385 kb on + strand, within OKGIIK_09620 at 2081.385 kb on + strand, within OKGIIK_09620 at 2081.385 kb on + strand, within OKGIIK_09620 at 2081.385 kb on + strand, within OKGIIK_09620 at 2081.385 kb on + strand, within OKGIIK_09620 at 2081.385 kb on + strand, within OKGIIK_09620 at 2081.385 kb on + strand, within OKGIIK_09620 at 2081.386 kb on - strand, within OKGIIK_09620 at 2081.386 kb on - strand, within OKGIIK_09620 at 2081.393 kb on + strand, within OKGIIK_09620 at 2081.394 kb on - strand, within OKGIIK_09620 at 2081.415 kb on + strand, within OKGIIK_09620 at 2081.415 kb on + strand, within OKGIIK_09620 at 2081.415 kb on + strand, within OKGIIK_09620 at 2081.415 kb on + strand, within OKGIIK_09620 at 2081.416 kb on - strand, within OKGIIK_09620 at 2081.416 kb on - strand, within OKGIIK_09620 at 2081.416 kb on - strand, within OKGIIK_09620 at 2081.416 kb on - strand, within OKGIIK_09620 at 2081.735 kb on - strand, within fabG at 2081.735 kb on - strand, within fabG at 2081.735 kb on - strand, within fabG at 2081.735 kb on - strand, within fabG at 2081.883 kb on + strand, within fabG at 2081.944 kb on + strand, within fabG at 2082.042 kb on + strand, within fabG at 2082.042 kb on + strand, within fabG at 2082.042 kb on + strand, within fabG at 2082.042 kb on + strand, within fabG at 2082.043 kb on - strand, within fabG at 2082.043 kb on - strand, within fabG
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,080,599 + OKGIIK_09615 0.33 +0.5 2,080,599 + OKGIIK_09615 0.33 -0.3 2,080,599 + OKGIIK_09615 0.33 +0.1 2,080,599 + OKGIIK_09615 0.33 -1.3 2,080,599 + OKGIIK_09615 0.33 -0.6 2,080,599 + OKGIIK_09615 0.33 -0.1 2,080,599 + OKGIIK_09615 0.33 -1.3 2,080,599 + OKGIIK_09615 0.33 -1.1 2,080,599 + OKGIIK_09615 0.33 +0.1 2,080,599 + OKGIIK_09615 0.33 -0.8 2,080,599 + OKGIIK_09615 0.33 -1.2 2,080,599 + OKGIIK_09615 0.33 +1.1 2,080,599 + OKGIIK_09615 0.33 +0.5 2,080,600 - OKGIIK_09615 0.34 -0.4 2,080,600 - OKGIIK_09615 0.34 +0.4 2,080,600 - OKGIIK_09615 0.34 +0.3 2,080,600 - OKGIIK_09615 0.34 +0.5 2,080,600 - OKGIIK_09615 0.34 -0.1 2,080,600 - OKGIIK_09615 0.34 +0.3 2,080,600 - OKGIIK_09615 0.34 +0.5 2,080,600 - OKGIIK_09615 0.34 -1.2 2,080,600 - OKGIIK_09615 0.34 +2.4 2,080,600 - OKGIIK_09615 0.34 -1.8 2,080,600 - OKGIIK_09615 0.34 +0.7 2,080,600 - OKGIIK_09615 0.34 -0.5 2,080,600 - OKGIIK_09615 0.34 -0.6 2,080,600 - OKGIIK_09615 0.34 -0.0 2,080,600 - OKGIIK_09615 0.34 -0.2 2,080,600 - OKGIIK_09615 0.34 +1.5 2,080,600 - OKGIIK_09615 0.34 +1.5 2,080,600 - OKGIIK_09615 0.34 -0.3 2,080,600 - OKGIIK_09615 0.34 -1.3 2,080,600 - OKGIIK_09615 0.34 -2.0 2,080,692 + OKGIIK_09615 0.45 -1.4 2,080,692 + OKGIIK_09615 0.45 +0.5 2,080,692 + OKGIIK_09615 0.45 +0.3 2,080,692 + OKGIIK_09615 0.45 -2.2 2,080,693 - OKGIIK_09615 0.45 -1.8 2,080,693 - OKGIIK_09615 0.45 -2.1 2,080,693 - OKGIIK_09615 0.45 +0.6 2,080,693 - OKGIIK_09615 0.45 -0.1 2,080,693 - OKGIIK_09615 0.45 -1.7 2,080,693 - OKGIIK_09615 0.45 +0.7 2,080,839 + OKGIIK_09615 0.63 -0.3 2,080,839 + OKGIIK_09615 0.63 -1.0 2,080,839 + OKGIIK_09615 0.63 +0.5 2,080,839 + OKGIIK_09615 0.63 +0.0 2,080,840 - OKGIIK_09615 0.63 +1.1 2,080,840 - OKGIIK_09615 0.63 +0.4 2,080,851 + OKGIIK_09615 0.64 -0.9 2,080,851 + OKGIIK_09615 0.64 -0.5 2,080,851 + OKGIIK_09615 0.64 +0.5 2,080,851 + OKGIIK_09615 0.64 -0.2 2,080,851 + OKGIIK_09615 0.64 -0.5 2,080,851 + OKGIIK_09615 0.64 -0.4 2,080,851 + OKGIIK_09615 0.64 -0.8 2,080,852 - OKGIIK_09615 0.64 -0.8 2,080,852 - OKGIIK_09615 0.64 -1.2 2,080,852 - OKGIIK_09615 0.64 +0.0 2,080,852 - OKGIIK_09615 0.64 +0.4 2,080,852 - OKGIIK_09615 0.64 +0.6 2,080,852 - OKGIIK_09615 0.64 -2.2 2,080,884 + OKGIIK_09615 0.68 -1.0 2,080,884 + OKGIIK_09615 0.68 -1.8 2,080,884 + OKGIIK_09615 0.68 +0.3 2,080,884 + OKGIIK_09615 0.68 +0.2 2,080,884 + OKGIIK_09615 0.68 +0.7 2,080,884 + OKGIIK_09615 0.68 +0.2 2,080,884 + OKGIIK_09615 0.68 -1.1 2,080,884 + OKGIIK_09615 0.68 -0.7 2,080,884 + OKGIIK_09615 0.68 +0.3 2,080,884 + OKGIIK_09615 0.68 +0.5 2,080,884 + OKGIIK_09615 0.68 +0.2 2,080,884 + OKGIIK_09615 0.68 +0.7 2,080,884 + OKGIIK_09615 0.68 -0.5 2,080,885 - OKGIIK_09615 0.68 -0.5 2,080,885 - OKGIIK_09615 0.68 +0.5 2,080,885 - OKGIIK_09615 0.68 +0.7 2,081,013 + OKGIIK_09615 0.84 -0.0 2,081,013 + OKGIIK_09615 0.84 +1.3 2,081,013 + OKGIIK_09615 0.84 +0.9 2,081,013 + OKGIIK_09615 0.84 -0.5 2,081,014 - OKGIIK_09615 0.84 -2.5 2,081,156 + -0.3 2,081,156 + -1.1 2,081,156 + -1.1 2,081,156 + -0.2 2,081,156 + -0.2 2,081,157 - +0.4 2,081,157 - -1.8 2,081,157 - +1.3 2,081,157 - -2.1 2,081,157 - +0.3 2,081,201 + OKGIIK_09620 0.18 -0.1 2,081,201 + OKGIIK_09620 0.18 +0.3 2,081,201 + OKGIIK_09620 0.18 +0.2 2,081,201 + OKGIIK_09620 0.18 -2.0 2,081,202 - OKGIIK_09620 0.18 +0.3 2,081,202 - OKGIIK_09620 0.18 -0.4 2,081,202 - OKGIIK_09620 0.18 -0.8 2,081,202 - OKGIIK_09620 0.18 -0.0 2,081,202 - OKGIIK_09620 0.18 +0.7 2,081,385 + OKGIIK_09620 0.77 -0.8 2,081,385 + OKGIIK_09620 0.77 -1.8 2,081,385 + OKGIIK_09620 0.77 -0.8 2,081,385 + OKGIIK_09620 0.77 -0.1 2,081,385 + OKGIIK_09620 0.77 +1.5 2,081,385 + OKGIIK_09620 0.77 -1.8 2,081,385 + OKGIIK_09620 0.77 -0.5 2,081,386 - OKGIIK_09620 0.77 +0.6 2,081,386 - OKGIIK_09620 0.77 -0.0 2,081,393 + OKGIIK_09620 0.79 -1.0 2,081,394 - OKGIIK_09620 0.79 -1.8 2,081,415 + OKGIIK_09620 0.86 -2.2 2,081,415 + OKGIIK_09620 0.86 -1.1 2,081,415 + OKGIIK_09620 0.86 -0.1 2,081,415 + OKGIIK_09620 0.86 +1.0 2,081,416 - OKGIIK_09620 0.86 -1.8 2,081,416 - OKGIIK_09620 0.86 +0.9 2,081,416 - OKGIIK_09620 0.86 +0.2 2,081,416 - OKGIIK_09620 0.86 +0.2 2,081,735 - fabG OKGIIK_09625 0.32 +0.1 2,081,735 - fabG OKGIIK_09625 0.32 -0.1 2,081,735 - fabG OKGIIK_09625 0.32 +1.0 2,081,735 - fabG OKGIIK_09625 0.32 +1.5 2,081,883 + fabG OKGIIK_09625 0.51 -0.5 2,081,944 + fabG OKGIIK_09625 0.59 +1.2 2,082,042 + fabG OKGIIK_09625 0.71 -0.1 2,082,042 + fabG OKGIIK_09625 0.71 -0.5 2,082,042 + fabG OKGIIK_09625 0.71 -1.4 2,082,042 + fabG OKGIIK_09625 0.71 +0.5 2,082,043 - fabG OKGIIK_09625 0.71 +0.2 2,082,043 - fabG OKGIIK_09625 0.71 -0.5
Or see this region's nucleotide sequence