Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rplI and rpsR are separated by 135 nucleotides rpsR and rpsF are separated by 14 nucleotides rpsF and iscA are separated by 183 nucleotides iscA and asnS are separated by 155 nucleotides
OKGIIK_09590: rplI - 50S ribosomal protein L9, at 2,076,984 to 2,077,433
rplI
OKGIIK_09595: rpsR - 30S ribosomal protein S18, at 2,077,569 to 2,077,799
rpsR
OKGIIK_09600: rpsF - 30S ribosomal protein S6, at 2,077,814 to 2,078,242
rpsF
OKGIIK_09605: iscA - iron-sulfur cluster assembly accessory protein, at 2,078,426 to 2,078,752
iscA
OKGIIK_09610: asnS - asparagine--tRNA ligase, at 2,078,908 to 2,080,308
asnS
Position (kb)
2078
2079 Strain fitness (log2 ratio)
-2
-1
0
1 at 2077.591 kb on + strand at 2077.592 kb on - strand, within rpsR at 2077.592 kb on - strand, within rpsR at 2077.592 kb on - strand, within rpsR at 2078.354 kb on - strand at 2078.354 kb on - strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.815 kb on + strand at 2078.816 kb on - strand at 2078.816 kb on - strand at 2078.816 kb on - strand at 2078.816 kb on - strand at 2078.816 kb on - strand at 2078.816 kb on - strand at 2078.816 kb on - strand at 2078.816 kb on - strand at 2078.816 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,077,591 + -0.8 2,077,592 - rpsR OKGIIK_09595 0.10 -1.5 2,077,592 - rpsR OKGIIK_09595 0.10 -1.3 2,077,592 - rpsR OKGIIK_09595 0.10 -0.8 2,078,354 - -1.3 2,078,354 - -0.4 2,078,815 + -1.1 2,078,815 + +1.2 2,078,815 + +0.3 2,078,815 + +0.4 2,078,815 + -0.5 2,078,815 + -1.7 2,078,815 + -0.0 2,078,815 + -2.0 2,078,815 + -1.8 2,078,815 + -0.3 2,078,815 + +1.1 2,078,815 + -0.6 2,078,815 + -0.9 2,078,815 + -0.5 2,078,816 - +0.1 2,078,816 - -0.7 2,078,816 - -1.8 2,078,816 - +0.2 2,078,816 - -0.8 2,078,816 - -1.3 2,078,816 - -0.7 2,078,816 - +0.5 2,078,816 - -1.6
Or see this region's nucleotide sequence