Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_03935 and OKGIIK_03940 are separated by 167 nucleotides OKGIIK_03940 and OKGIIK_03945 are separated by 26 nucleotides OKGIIK_03945 and mutT overlap by 4 nucleotides mutT and OKGIIK_03955 overlap by 4 nucleotides
OKGIIK_03935: OKGIIK_03935 - Enoyl-CoA hydratase, at 863,986 to 864,768
_03935
OKGIIK_03940: OKGIIK_03940 - Peptidyl-prolyl cis-trans isomerase, at 864,936 to 865,664
_03940
OKGIIK_03945: OKGIIK_03945 - DUF1289 domain-containing protein, at 865,691 to 865,882
_03945
OKGIIK_03950: mutT - 8-oxo-dGTP pyrophosphatase MutT and related house-cleaning NTP pyrophosphohydrolases, NUDIX family, at 865,879 to 866,472
mutT
OKGIIK_03955: OKGIIK_03955 - Sulfurtransferase, at 866,469 to 867,317
_03955
Position (kb) 865
866 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 864.762 kb on - strand at 864.802 kb on + strand at 864.802 kb on + strand at 864.802 kb on + strand at 864.802 kb on + strand at 864.803 kb on - strand at 864.803 kb on - strand at 864.803 kb on - strand at 864.803 kb on - strand at 864.803 kb on - strand at 864.803 kb on - strand at 864.803 kb on - strand at 864.877 kb on + strand at 864.877 kb on + strand at 864.877 kb on + strand at 864.877 kb on + strand at 864.878 kb on - strand at 864.878 kb on - strand at 864.878 kb on - strand at 864.878 kb on - strand at 865.056 kb on + strand, within OKGIIK_03940 at 865.056 kb on + strand, within OKGIIK_03940 at 865.057 kb on - strand, within OKGIIK_03940 at 865.057 kb on - strand, within OKGIIK_03940 at 865.057 kb on - strand, within OKGIIK_03940 at 865.057 kb on - strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.146 kb on + strand, within OKGIIK_03940 at 865.147 kb on - strand, within OKGIIK_03940 at 865.147 kb on - strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.281 kb on + strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.282 kb on - strand, within OKGIIK_03940 at 865.338 kb on + strand, within OKGIIK_03940 at 865.338 kb on + strand, within OKGIIK_03940 at 865.339 kb on - strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.404 kb on + strand, within OKGIIK_03940 at 865.405 kb on - strand, within OKGIIK_03940 at 865.405 kb on - strand, within OKGIIK_03940 at 865.405 kb on - strand, within OKGIIK_03940 at 865.428 kb on - strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.566 kb on + strand, within OKGIIK_03940 at 865.677 kb on + strand at 865.677 kb on + strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.678 kb on - strand at 865.998 kb on - strand, within mutT at 866.036 kb on + strand, within mutT at 866.036 kb on + strand, within mutT at 866.036 kb on + strand, within mutT at 866.037 kb on - strand, within mutT at 866.037 kb on - strand, within mutT at 866.194 kb on + strand, within mutT at 866.194 kb on + strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.195 kb on - strand, within mutT at 866.272 kb on + strand, within mutT at 866.273 kb on - strand, within mutT at 866.273 kb on - strand, within mutT at 866.350 kb on + strand, within mutT at 866.350 kb on + strand, within mutT at 866.350 kb on + strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.351 kb on - strand, within mutT at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.440 kb on + strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.441 kb on - strand at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.586 kb on + strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.587 kb on - strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.754 kb on + strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.755 kb on - strand, within OKGIIK_03955 at 866.818 kb on + strand, within OKGIIK_03955 at 866.819 kb on - strand, within OKGIIK_03955 at 866.819 kb on - strand, within OKGIIK_03955
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 864,762 - +0.1 864,802 + -1.4 864,802 + +1.2 864,802 + +1.5 864,802 + -0.2 864,803 - -1.1 864,803 - -0.7 864,803 - +0.6 864,803 - -1.5 864,803 - -0.5 864,803 - -0.6 864,803 - +0.5 864,877 + -0.3 864,877 + -0.5 864,877 + -0.5 864,877 + -0.3 864,878 - +0.1 864,878 - -1.8 864,878 - -1.2 864,878 - +0.7 865,056 + OKGIIK_03940 0.16 -0.1 865,056 + OKGIIK_03940 0.16 -2.1 865,057 - OKGIIK_03940 0.17 -1.5 865,057 - OKGIIK_03940 0.17 +0.4 865,057 - OKGIIK_03940 0.17 -0.1 865,057 - OKGIIK_03940 0.17 -0.3 865,146 + OKGIIK_03940 0.29 -0.1 865,146 + OKGIIK_03940 0.29 +0.2 865,146 + OKGIIK_03940 0.29 +0.8 865,146 + OKGIIK_03940 0.29 +0.3 865,146 + OKGIIK_03940 0.29 -1.5 865,146 + OKGIIK_03940 0.29 -0.3 865,146 + OKGIIK_03940 0.29 -0.2 865,146 + OKGIIK_03940 0.29 -1.7 865,147 - OKGIIK_03940 0.29 +0.3 865,147 - OKGIIK_03940 0.29 +0.6 865,281 + OKGIIK_03940 0.47 -0.3 865,281 + OKGIIK_03940 0.47 -2.1 865,281 + OKGIIK_03940 0.47 -0.9 865,281 + OKGIIK_03940 0.47 -0.3 865,281 + OKGIIK_03940 0.47 +1.5 865,281 + OKGIIK_03940 0.47 -0.7 865,281 + OKGIIK_03940 0.47 +1.2 865,281 + OKGIIK_03940 0.47 -0.9 865,281 + OKGIIK_03940 0.47 +1.5 865,281 + OKGIIK_03940 0.47 -0.5 865,281 + OKGIIK_03940 0.47 -0.8 865,281 + OKGIIK_03940 0.47 -0.3 865,281 + OKGIIK_03940 0.47 -0.8 865,281 + OKGIIK_03940 0.47 -0.8 865,281 + OKGIIK_03940 0.47 -1.5 865,281 + OKGIIK_03940 0.47 -1.1 865,282 - OKGIIK_03940 0.47 -0.8 865,282 - OKGIIK_03940 0.47 +1.3 865,282 - OKGIIK_03940 0.47 -0.7 865,282 - OKGIIK_03940 0.47 -0.8 865,282 - OKGIIK_03940 0.47 -0.8 865,282 - OKGIIK_03940 0.47 +0.9 865,282 - OKGIIK_03940 0.47 -0.1 865,282 - OKGIIK_03940 0.47 -0.1 865,282 - OKGIIK_03940 0.47 -0.8 865,282 - OKGIIK_03940 0.47 -0.1 865,282 - OKGIIK_03940 0.47 +0.5 865,282 - OKGIIK_03940 0.47 -0.4 865,282 - OKGIIK_03940 0.47 -0.8 865,282 - OKGIIK_03940 0.47 +0.1 865,282 - OKGIIK_03940 0.47 -1.5 865,338 + OKGIIK_03940 0.55 -0.6 865,338 + OKGIIK_03940 0.55 -0.3 865,339 - OKGIIK_03940 0.55 -0.1 865,404 + OKGIIK_03940 0.64 +0.4 865,404 + OKGIIK_03940 0.64 +1.1 865,404 + OKGIIK_03940 0.64 +1.1 865,404 + OKGIIK_03940 0.64 +0.2 865,404 + OKGIIK_03940 0.64 -0.0 865,404 + OKGIIK_03940 0.64 -1.3 865,404 + OKGIIK_03940 0.64 +0.2 865,404 + OKGIIK_03940 0.64 -0.5 865,405 - OKGIIK_03940 0.64 -3.5 865,405 - OKGIIK_03940 0.64 +0.3 865,405 - OKGIIK_03940 0.64 +1.5 865,428 - OKGIIK_03940 0.67 -1.4 865,566 + OKGIIK_03940 0.86 +1.0 865,566 + OKGIIK_03940 0.86 +0.0 865,566 + OKGIIK_03940 0.86 -0.4 865,566 + OKGIIK_03940 0.86 +0.9 865,677 + -0.8 865,677 + -1.6 865,678 - -0.0 865,678 - -0.5 865,678 - -2.1 865,678 - -1.8 865,998 - mutT OKGIIK_03950 0.20 -0.9 866,036 + mutT OKGIIK_03950 0.26 -0.1 866,036 + mutT OKGIIK_03950 0.26 -0.6 866,036 + mutT OKGIIK_03950 0.26 -0.2 866,037 - mutT OKGIIK_03950 0.27 -0.4 866,037 - mutT OKGIIK_03950 0.27 -1.3 866,194 + mutT OKGIIK_03950 0.53 -0.4 866,194 + mutT OKGIIK_03950 0.53 -0.3 866,195 - mutT OKGIIK_03950 0.53 -0.0 866,195 - mutT OKGIIK_03950 0.53 -0.7 866,195 - mutT OKGIIK_03950 0.53 -0.3 866,195 - mutT OKGIIK_03950 0.53 -1.1 866,272 + mutT OKGIIK_03950 0.66 +1.1 866,273 - mutT OKGIIK_03950 0.66 -1.7 866,273 - mutT OKGIIK_03950 0.66 -0.7 866,350 + mutT OKGIIK_03950 0.79 -1.4 866,350 + mutT OKGIIK_03950 0.79 +0.5 866,350 + mutT OKGIIK_03950 0.79 -0.3 866,351 - mutT OKGIIK_03950 0.79 -0.1 866,351 - mutT OKGIIK_03950 0.79 +1.7 866,351 - mutT OKGIIK_03950 0.79 +0.2 866,351 - mutT OKGIIK_03950 0.79 +0.7 866,351 - mutT OKGIIK_03950 0.79 +0.6 866,351 - mutT OKGIIK_03950 0.79 -1.8 866,440 + +0.1 866,440 + -0.4 866,440 + -0.0 866,440 + +1.5 866,440 + -1.1 866,440 + -0.1 866,440 + -0.3 866,440 + +0.6 866,440 + +1.3 866,440 + +0.5 866,440 + +0.7 866,441 - +0.1 866,441 - -1.7 866,441 - -0.5 866,441 - +0.7 866,441 - -0.8 866,441 - +0.0 866,441 - +0.5 866,441 - +0.2 866,441 - -0.8 866,441 - -0.5 866,441 - +0.8 866,441 - -1.1 866,441 - -0.7 866,441 - -0.1 866,586 + OKGIIK_03955 0.14 -0.0 866,586 + OKGIIK_03955 0.14 -1.1 866,586 + OKGIIK_03955 0.14 -0.6 866,586 + OKGIIK_03955 0.14 +1.0 866,586 + OKGIIK_03955 0.14 +0.5 866,586 + OKGIIK_03955 0.14 +0.4 866,586 + OKGIIK_03955 0.14 -1.1 866,587 - OKGIIK_03955 0.14 -1.0 866,587 - OKGIIK_03955 0.14 -1.6 866,587 - OKGIIK_03955 0.14 -0.1 866,587 - OKGIIK_03955 0.14 -1.6 866,587 - OKGIIK_03955 0.14 -0.3 866,587 - OKGIIK_03955 0.14 -2.4 866,587 - OKGIIK_03955 0.14 -0.5 866,587 - OKGIIK_03955 0.14 -1.1 866,587 - OKGIIK_03955 0.14 -0.5 866,587 - OKGIIK_03955 0.14 +0.5 866,587 - OKGIIK_03955 0.14 +0.8 866,587 - OKGIIK_03955 0.14 -0.2 866,587 - OKGIIK_03955 0.14 -0.1 866,587 - OKGIIK_03955 0.14 -0.8 866,587 - OKGIIK_03955 0.14 +0.5 866,587 - OKGIIK_03955 0.14 +1.3 866,587 - OKGIIK_03955 0.14 +0.8 866,587 - OKGIIK_03955 0.14 -1.5 866,587 - OKGIIK_03955 0.14 -0.5 866,587 - OKGIIK_03955 0.14 +1.5 866,587 - OKGIIK_03955 0.14 -0.3 866,754 + OKGIIK_03955 0.34 +0.8 866,754 + OKGIIK_03955 0.34 -1.4 866,754 + OKGIIK_03955 0.34 +0.8 866,754 + OKGIIK_03955 0.34 -2.0 866,754 + OKGIIK_03955 0.34 -1.3 866,754 + OKGIIK_03955 0.34 +0.5 866,754 + OKGIIK_03955 0.34 -0.6 866,755 - OKGIIK_03955 0.34 -0.1 866,755 - OKGIIK_03955 0.34 +0.7 866,755 - OKGIIK_03955 0.34 +0.1 866,755 - OKGIIK_03955 0.34 +0.3 866,755 - OKGIIK_03955 0.34 +2.5 866,755 - OKGIIK_03955 0.34 +0.3 866,755 - OKGIIK_03955 0.34 +0.3 866,755 - OKGIIK_03955 0.34 -0.3 866,755 - OKGIIK_03955 0.34 +0.9 866,755 - OKGIIK_03955 0.34 -0.3 866,818 + OKGIIK_03955 0.41 -1.2 866,819 - OKGIIK_03955 0.41 +0.5 866,819 - OKGIIK_03955 0.41 -2.0
Or see this region's nucleotide sequence