Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_03300

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyciW and OKGIIK_03290 are separated by 131 nucleotidesOKGIIK_03290 and OKGIIK_03295 overlap by 35 nucleotidesOKGIIK_03295 and minE are separated by 91 nucleotidesminE and minD are separated by 5 nucleotidesminD and minC are separated by 37 nucleotides OKGIIK_03285: yciW - carboxymuconolactone decarboxylase, at 741,201 to 741,662 yciW OKGIIK_03290: OKGIIK_03290 - Cation transport regulator, at 741,794 to 742,072 _03290 OKGIIK_03295: OKGIIK_03295 - hypothetical protein, at 742,038 to 742,541 _03295 OKGIIK_03300: minE - cell division topological specificity factor MinE, at 742,633 to 742,929 minE OKGIIK_03305: minD - septum site-determining protein MinD, at 742,935 to 743,750 minD OKGIIK_03310: minC - septum site-determining protein MinC, at 743,788 to 744,564 minC Position (kb) 742 743Strain fitness (log2 ratio) -2 -1 0 1at 741.639 kb on + strandat 741.639 kb on + strandat 741.639 kb on + strandat 741.639 kb on + strandat 741.640 kb on - strandat 741.800 kb on + strandat 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.866 kb on + strand, within OKGIIK_03290at 741.867 kb on - strand, within OKGIIK_03290at 741.867 kb on - strand, within OKGIIK_03290at 741.867 kb on - strand, within OKGIIK_03290at 741.867 kb on - strand, within OKGIIK_03290at 741.867 kb on - strand, within OKGIIK_03290at 741.867 kb on - strand, within OKGIIK_03290at 741.867 kb on - strand, within OKGIIK_03290at 741.899 kb on + strand, within OKGIIK_03290at 741.899 kb on + strand, within OKGIIK_03290at 741.900 kb on - strand, within OKGIIK_03290at 741.900 kb on - strand, within OKGIIK_03290at 741.900 kb on - strand, within OKGIIK_03290at 741.952 kb on + strand, within OKGIIK_03290at 741.953 kb on - strand, within OKGIIK_03290at 741.953 kb on - strand, within OKGIIK_03290at 741.953 kb on - strand, within OKGIIK_03290at 741.983 kb on + strand, within OKGIIK_03290at 741.983 kb on + strand, within OKGIIK_03290at 741.983 kb on + strand, within OKGIIK_03290at 741.983 kb on + strand, within OKGIIK_03290at 741.983 kb on + strand, within OKGIIK_03290at 741.983 kb on + strand, within OKGIIK_03290at 741.983 kb on + strand, within OKGIIK_03290at 741.983 kb on + strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 741.984 kb on - strand, within OKGIIK_03290at 742.056 kb on + strandat 742.057 kb on - strandat 742.138 kb on + strand, within OKGIIK_03295at 742.138 kb on + strand, within OKGIIK_03295at 742.139 kb on - strand, within OKGIIK_03295at 742.349 kb on - strand, within OKGIIK_03295at 743.348 kb on - strand, within minDat 743.402 kb on - strand, within minDat 743.736 kb on - strandat 743.781 kb on + strandat 743.781 kb on + strandat 743.781 kb on + strandat 743.782 kb on - strandat 743.782 kb on - strandat 743.782 kb on - strandat 743.782 kb on - strandat 743.782 kb on - strandat 743.782 kb on - strandat 743.782 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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741,639 + -1.0
741,639 + +0.2
741,639 + +0.8
741,639 + -0.7
741,640 - -0.0
741,800 + +0.6
741,866 + OKGIIK_03290 0.26 -0.2
741,866 + OKGIIK_03290 0.26 -1.4
741,866 + OKGIIK_03290 0.26 -0.8
741,866 + OKGIIK_03290 0.26 -0.7
741,866 + OKGIIK_03290 0.26 +0.5
741,866 + OKGIIK_03290 0.26 -1.1
741,866 + OKGIIK_03290 0.26 -0.7
741,866 + OKGIIK_03290 0.26 +1.5
741,866 + OKGIIK_03290 0.26 -2.0
741,866 + OKGIIK_03290 0.26 +0.5
741,867 - OKGIIK_03290 0.26 -0.1
741,867 - OKGIIK_03290 0.26 +1.5
741,867 - OKGIIK_03290 0.26 -0.2
741,867 - OKGIIK_03290 0.26 +0.6
741,867 - OKGIIK_03290 0.26 +0.5
741,867 - OKGIIK_03290 0.26 -1.3
741,867 - OKGIIK_03290 0.26 +0.6
741,899 + OKGIIK_03290 0.38 +0.0
741,899 + OKGIIK_03290 0.38 +0.5
741,900 - OKGIIK_03290 0.38 +0.0
741,900 - OKGIIK_03290 0.38 -1.7
741,900 - OKGIIK_03290 0.38 -0.2
741,952 + OKGIIK_03290 0.57 -2.0
741,953 - OKGIIK_03290 0.57 +0.3
741,953 - OKGIIK_03290 0.57 +1.4
741,953 - OKGIIK_03290 0.57 +1.1
741,983 + OKGIIK_03290 0.68 -0.4
741,983 + OKGIIK_03290 0.68 +0.4
741,983 + OKGIIK_03290 0.68 -0.0
741,983 + OKGIIK_03290 0.68 -2.3
741,983 + OKGIIK_03290 0.68 +0.6
741,983 + OKGIIK_03290 0.68 -1.3
741,983 + OKGIIK_03290 0.68 -0.1
741,983 + OKGIIK_03290 0.68 +1.5
741,984 - OKGIIK_03290 0.68 -1.5
741,984 - OKGIIK_03290 0.68 -0.3
741,984 - OKGIIK_03290 0.68 -1.5
741,984 - OKGIIK_03290 0.68 -0.2
741,984 - OKGIIK_03290 0.68 -0.5
741,984 - OKGIIK_03290 0.68 -0.1
741,984 - OKGIIK_03290 0.68 +0.5
741,984 - OKGIIK_03290 0.68 -1.0
741,984 - OKGIIK_03290 0.68 -1.1
741,984 - OKGIIK_03290 0.68 -0.1
742,056 + -0.0
742,057 - -0.5
742,138 + OKGIIK_03295 0.20 +0.1
742,138 + OKGIIK_03295 0.20 +1.1
742,139 - OKGIIK_03295 0.20 -0.5
742,349 - OKGIIK_03295 0.62 -0.8
743,348 - minD OKGIIK_03305 0.51 -0.5
743,402 - minD OKGIIK_03305 0.57 -1.1
743,736 - -0.8
743,781 + -0.5
743,781 + +0.2
743,781 + -0.1
743,782 - -1.8
743,782 - +0.2
743,782 - +1.5
743,782 - -1.2
743,782 - +0.8
743,782 - +0.8
743,782 - -1.4

Or see this region's nucleotide sequence