Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_01755 and sucC are separated by 310 nucleotides sucC and sucD are separated by 96 nucleotides
OKGIIK_01755: OKGIIK_01755 - Histidine kinase, at 405,745 to 407,394
_01755
OKGIIK_01760: sucC - ADP-forming succinate--CoA ligase subunit beta, at 407,705 to 408,865
sucC
OKGIIK_01765: sucD - succinate--CoA ligase subunit alpha, at 408,962 to 409,837
sucD
Position (kb) 407
408
409 Strain fitness (log2 ratio) -2
-1
0
1
2 at 406.889 kb on + strand, within OKGIIK_01755 at 406.889 kb on + strand, within OKGIIK_01755 at 406.889 kb on + strand, within OKGIIK_01755 at 406.890 kb on - strand, within OKGIIK_01755 at 406.890 kb on - strand, within OKGIIK_01755 at 406.890 kb on - strand, within OKGIIK_01755 at 406.890 kb on - strand, within OKGIIK_01755 at 406.890 kb on - strand, within OKGIIK_01755 at 406.890 kb on - strand, within OKGIIK_01755 at 406.890 kb on - strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.962 kb on + strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 406.963 kb on - strand, within OKGIIK_01755 at 407.156 kb on + strand, within OKGIIK_01755 at 407.157 kb on - strand, within OKGIIK_01755 at 407.157 kb on - strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.207 kb on + strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.208 kb on - strand, within OKGIIK_01755 at 407.291 kb on + strand at 407.292 kb on - strand at 407.292 kb on - strand at 407.292 kb on - strand at 407.450 kb on + strand at 407.450 kb on + strand at 407.450 kb on + strand at 407.451 kb on - strand at 407.451 kb on - strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.452 kb on + strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.453 kb on - strand at 407.559 kb on + strand at 407.559 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.576 kb on + strand at 407.577 kb on - strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.592 kb on + strand at 407.699 kb on + strand at 408.863 kb on + strand at 408.863 kb on + strand at 408.863 kb on + strand at 408.940 kb on + strand at 408.940 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 406,889 + OKGIIK_01755 0.69 -1.4 406,889 + OKGIIK_01755 0.69 -1.7 406,889 + OKGIIK_01755 0.69 +1.4 406,890 - OKGIIK_01755 0.69 +1.4 406,890 - OKGIIK_01755 0.69 +0.3 406,890 - OKGIIK_01755 0.69 +2.0 406,890 - OKGIIK_01755 0.69 +0.4 406,890 - OKGIIK_01755 0.69 +0.2 406,890 - OKGIIK_01755 0.69 +0.2 406,890 - OKGIIK_01755 0.69 -0.8 406,962 + OKGIIK_01755 0.74 +1.3 406,962 + OKGIIK_01755 0.74 -0.3 406,962 + OKGIIK_01755 0.74 -2.1 406,962 + OKGIIK_01755 0.74 -1.1 406,962 + OKGIIK_01755 0.74 +1.2 406,962 + OKGIIK_01755 0.74 +0.2 406,962 + OKGIIK_01755 0.74 -1.0 406,962 + OKGIIK_01755 0.74 +1.0 406,962 + OKGIIK_01755 0.74 +0.1 406,962 + OKGIIK_01755 0.74 -0.6 406,962 + OKGIIK_01755 0.74 -2.5 406,962 + OKGIIK_01755 0.74 -0.1 406,962 + OKGIIK_01755 0.74 +0.9 406,962 + OKGIIK_01755 0.74 +0.0 406,962 + OKGIIK_01755 0.74 +1.0 406,962 + OKGIIK_01755 0.74 +1.8 406,963 - OKGIIK_01755 0.74 +0.2 406,963 - OKGIIK_01755 0.74 -1.7 406,963 - OKGIIK_01755 0.74 +1.2 406,963 - OKGIIK_01755 0.74 +0.8 406,963 - OKGIIK_01755 0.74 +1.4 406,963 - OKGIIK_01755 0.74 -1.9 406,963 - OKGIIK_01755 0.74 -1.0 406,963 - OKGIIK_01755 0.74 +0.9 406,963 - OKGIIK_01755 0.74 -0.3 406,963 - OKGIIK_01755 0.74 -0.9 406,963 - OKGIIK_01755 0.74 -1.0 406,963 - OKGIIK_01755 0.74 +0.4 406,963 - OKGIIK_01755 0.74 -1.4 407,156 + OKGIIK_01755 0.86 +0.4 407,157 - OKGIIK_01755 0.86 -0.6 407,157 - OKGIIK_01755 0.86 -2.6 407,207 + OKGIIK_01755 0.89 +0.5 407,207 + OKGIIK_01755 0.89 -0.0 407,207 + OKGIIK_01755 0.89 -0.4 407,207 + OKGIIK_01755 0.89 -1.0 407,207 + OKGIIK_01755 0.89 -0.5 407,207 + OKGIIK_01755 0.89 -1.0 407,207 + OKGIIK_01755 0.89 +0.4 407,207 + OKGIIK_01755 0.89 +1.7 407,207 + OKGIIK_01755 0.89 -1.1 407,207 + OKGIIK_01755 0.89 +0.8 407,207 + OKGIIK_01755 0.89 +0.3 407,208 - OKGIIK_01755 0.89 -1.4 407,208 - OKGIIK_01755 0.89 +2.4 407,208 - OKGIIK_01755 0.89 -0.9 407,208 - OKGIIK_01755 0.89 -0.1 407,208 - OKGIIK_01755 0.89 +1.0 407,208 - OKGIIK_01755 0.89 -1.8 407,208 - OKGIIK_01755 0.89 +1.0 407,208 - OKGIIK_01755 0.89 +0.8 407,208 - OKGIIK_01755 0.89 +1.4 407,208 - OKGIIK_01755 0.89 -0.3 407,208 - OKGIIK_01755 0.89 +0.2 407,208 - OKGIIK_01755 0.89 +0.2 407,291 + +0.2 407,292 - -2.3 407,292 - +0.2 407,292 - -0.3 407,450 + -0.6 407,450 + +0.2 407,450 + -0.9 407,451 - +0.1 407,451 - -0.7 407,452 + +0.1 407,452 + +1.8 407,452 + -0.6 407,452 + +0.7 407,452 + +0.1 407,452 + +0.6 407,452 + -0.5 407,452 + +0.2 407,452 + +2.7 407,452 + +1.4 407,452 + +0.3 407,453 - -1.4 407,453 - -0.1 407,453 - -0.4 407,453 - -0.8 407,453 - +0.4 407,453 - -1.6 407,453 - +0.5 407,453 - -0.0 407,453 - -0.9 407,453 - -0.6 407,559 + -0.1 407,559 + +0.4 407,576 + +0.4 407,576 + +1.2 407,576 + -0.9 407,576 + -0.6 407,576 + -0.7 407,576 + -1.5 407,576 + +0.7 407,576 + -1.4 407,576 + -1.9 407,576 + +0.4 407,576 + -0.6 407,576 + +0.4 407,576 + -0.3 407,576 + +0.1 407,576 + +1.1 407,576 + +0.9 407,576 + +1.4 407,576 + -0.9 407,576 + +0.1 407,576 + -1.5 407,576 + +0.4 407,576 + -2.3 407,576 + +0.1 407,576 + +0.2 407,576 + -2.0 407,577 - -1.6 407,592 + +0.1 407,592 + +0.2 407,592 + -1.6 407,592 + -0.7 407,592 + -1.3 407,592 + +1.9 407,592 + +0.5 407,592 + +0.2 407,592 + -0.9 407,592 + -1.1 407,592 + -0.6 407,592 + +1.0 407,699 + -0.4 408,863 + +0.0 408,863 + +0.6 408,863 + -1.0 408,940 + +0.8 408,940 + +0.1
Or see this region's nucleotide sequence