Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_01415

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_01410 and OKGIIK_01415 are separated by 32 nucleotidesOKGIIK_01415 and OKGIIK_01420 are separated by 43 nucleotides OKGIIK_01410: OKGIIK_01410 - Histidine kinase, at 313,464 to 314,465 _01410 OKGIIK_01415: OKGIIK_01415 - hypothetical protein, at 314,498 to 314,623 _01415 OKGIIK_01420: OKGIIK_01420 - Histidine kinase, at 314,667 to 318,299 _01420 Position (kb) 314 315Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.510 kb on + strandat 313.511 kb on - strandat 313.511 kb on - strandat 313.511 kb on - strandat 313.511 kb on - strandat 313.511 kb on - strandat 313.511 kb on - strandat 313.511 kb on - strandat 313.511 kb on - strandat 313.511 kb on - strandat 313.639 kb on + strand, within OKGIIK_01410at 313.639 kb on + strand, within OKGIIK_01410at 313.639 kb on + strand, within OKGIIK_01410at 313.640 kb on - strand, within OKGIIK_01410at 313.640 kb on - strand, within OKGIIK_01410at 314.086 kb on + strand, within OKGIIK_01410at 314.086 kb on + strand, within OKGIIK_01410at 314.086 kb on + strand, within OKGIIK_01410at 314.086 kb on + strand, within OKGIIK_01410at 314.087 kb on - strand, within OKGIIK_01410at 314.087 kb on - strand, within OKGIIK_01410at 314.087 kb on - strand, within OKGIIK_01410at 314.087 kb on - strand, within OKGIIK_01410at 314.149 kb on + strand, within OKGIIK_01410at 314.149 kb on + strand, within OKGIIK_01410at 314.149 kb on + strand, within OKGIIK_01410at 314.149 kb on + strand, within OKGIIK_01410at 314.149 kb on + strand, within OKGIIK_01410at 314.150 kb on - strand, within OKGIIK_01410at 314.150 kb on - strand, within OKGIIK_01410at 314.150 kb on - strand, within OKGIIK_01410at 314.150 kb on - strand, within OKGIIK_01410at 314.150 kb on - strand, within OKGIIK_01410at 314.150 kb on - strand, within OKGIIK_01410at 314.150 kb on - strand, within OKGIIK_01410at 314.200 kb on + strand, within OKGIIK_01410at 314.200 kb on + strand, within OKGIIK_01410at 314.200 kb on + strand, within OKGIIK_01410at 314.454 kb on + strandat 314.499 kb on + strandat 314.499 kb on + strandat 314.499 kb on + strandat 314.499 kb on + strandat 314.499 kb on + strandat 314.580 kb on + strand, within OKGIIK_01415at 314.581 kb on - strand, within OKGIIK_01415at 314.737 kb on + strandat 314.737 kb on + strandat 314.737 kb on + strandat 314.737 kb on + strandat 314.737 kb on + strandat 314.738 kb on - strandat 314.738 kb on - strandat 314.857 kb on + strandat 314.857 kb on + strandat 314.858 kb on - strandat 315.175 kb on + strand, within OKGIIK_01420at 315.175 kb on + strand, within OKGIIK_01420at 315.175 kb on + strand, within OKGIIK_01420at 315.175 kb on + strand, within OKGIIK_01420at 315.175 kb on + strand, within OKGIIK_01420at 315.176 kb on - strand, within OKGIIK_01420at 315.176 kb on - strand, within OKGIIK_01420at 315.176 kb on - strand, within OKGIIK_01420at 315.223 kb on + strand, within OKGIIK_01420at 315.223 kb on + strand, within OKGIIK_01420at 315.223 kb on + strand, within OKGIIK_01420at 315.223 kb on + strand, within OKGIIK_01420at 315.223 kb on + strand, within OKGIIK_01420at 315.223 kb on + strand, within OKGIIK_01420at 315.224 kb on - strand, within OKGIIK_01420at 315.224 kb on - strand, within OKGIIK_01420at 315.325 kb on + strand, within OKGIIK_01420at 315.326 kb on - strand, within OKGIIK_01420at 315.326 kb on - strand, within OKGIIK_01420at 315.326 kb on - strand, within OKGIIK_01420at 315.326 kb on - strand, within OKGIIK_01420at 315.332 kb on + strand, within OKGIIK_01420at 315.566 kb on + strand, within OKGIIK_01420

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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313,510 + -0.1
313,510 + -1.6
313,510 + -0.8
313,510 + -0.6
313,510 + +0.1
313,510 + -1.2
313,510 + +0.4
313,510 + +0.7
313,510 + +0.1
313,510 + -1.4
313,510 + -1.1
313,510 + +1.0
313,510 + -1.0
313,510 + +1.8
313,510 + +0.6
313,511 - +0.7
313,511 - +0.7
313,511 - +1.1
313,511 - +0.5
313,511 - -0.6
313,511 - +1.1
313,511 - -2.9
313,511 - +1.0
313,511 - -0.5
313,639 + OKGIIK_01410 0.17 -0.0
313,639 + OKGIIK_01410 0.17 -0.3
313,639 + OKGIIK_01410 0.17 -0.8
313,640 - OKGIIK_01410 0.18 -0.9
313,640 - OKGIIK_01410 0.18 +1.4
314,086 + OKGIIK_01410 0.62 -1.2
314,086 + OKGIIK_01410 0.62 -1.2
314,086 + OKGIIK_01410 0.62 +0.7
314,086 + OKGIIK_01410 0.62 +0.4
314,087 - OKGIIK_01410 0.62 -1.4
314,087 - OKGIIK_01410 0.62 -0.8
314,087 - OKGIIK_01410 0.62 -2.3
314,087 - OKGIIK_01410 0.62 -1.6
314,149 + OKGIIK_01410 0.68 -0.1
314,149 + OKGIIK_01410 0.68 -1.3
314,149 + OKGIIK_01410 0.68 -0.2
314,149 + OKGIIK_01410 0.68 -0.2
314,149 + OKGIIK_01410 0.68 +0.9
314,150 - OKGIIK_01410 0.68 +1.1
314,150 - OKGIIK_01410 0.68 -0.5
314,150 - OKGIIK_01410 0.68 -0.6
314,150 - OKGIIK_01410 0.68 -0.1
314,150 - OKGIIK_01410 0.68 -0.8
314,150 - OKGIIK_01410 0.68 +1.0
314,150 - OKGIIK_01410 0.68 -1.2
314,200 + OKGIIK_01410 0.73 -2.1
314,200 + OKGIIK_01410 0.73 +1.2
314,200 + OKGIIK_01410 0.73 -0.7
314,454 + -0.1
314,499 + +0.1
314,499 + +1.2
314,499 + -0.7
314,499 + -0.7
314,499 + -1.6
314,580 + OKGIIK_01415 0.65 -1.2
314,581 - OKGIIK_01415 0.66 -0.6
314,737 + +0.4
314,737 + -0.2
314,737 + -1.1
314,737 + +0.4
314,737 + -0.6
314,738 - +0.4
314,738 - -0.8
314,857 + +0.7
314,857 + -2.1
314,858 - -0.6
315,175 + OKGIIK_01420 0.14 +1.0
315,175 + OKGIIK_01420 0.14 -0.6
315,175 + OKGIIK_01420 0.14 +1.0
315,175 + OKGIIK_01420 0.14 -0.9
315,175 + OKGIIK_01420 0.14 +0.1
315,176 - OKGIIK_01420 0.14 +0.7
315,176 - OKGIIK_01420 0.14 -0.2
315,176 - OKGIIK_01420 0.14 -0.6
315,223 + OKGIIK_01420 0.15 -2.1
315,223 + OKGIIK_01420 0.15 +0.1
315,223 + OKGIIK_01420 0.15 -1.1
315,223 + OKGIIK_01420 0.15 +0.7
315,223 + OKGIIK_01420 0.15 -1.6
315,223 + OKGIIK_01420 0.15 -0.8
315,224 - OKGIIK_01420 0.15 -1.2
315,224 - OKGIIK_01420 0.15 +1.2
315,325 + OKGIIK_01420 0.18 +0.8
315,326 - OKGIIK_01420 0.18 +0.4
315,326 - OKGIIK_01420 0.18 -1.6
315,326 - OKGIIK_01420 0.18 -1.0
315,326 - OKGIIK_01420 0.18 -0.6
315,332 + OKGIIK_01420 0.18 -1.1
315,566 + OKGIIK_01420 0.25 -2.4

Or see this region's nucleotide sequence