Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06848

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
114,640	+		MPMX19_06847	0.42	-0.3
114,640	+		MPMX19_06847	0.42	-0.5
114,640	+		MPMX19_06847	0.42	-0.1
114,641	-		MPMX19_06847	0.42	-1.2
114,641	-		MPMX19_06847	0.42	-0.7
114,641	-		MPMX19_06847	0.42	-1.3
114,641	-		MPMX19_06847	0.42	+1.5
114,807	-		MPMX19_06847	0.55	+0.5
114,807	-		MPMX19_06847	0.55	-1.6
114,926	+		MPMX19_06847	0.65	-0.6
114,926	+		MPMX19_06847	0.65	-0.5
114,927	-		MPMX19_06847	0.65	+0.1
114,927	-		MPMX19_06847	0.65	-1.1
114,927	-		MPMX19_06847	0.65	-0.3
114,927	-		MPMX19_06847	0.65	-0.4
114,927	-		MPMX19_06847	0.65	-0.5
114,927	-		MPMX19_06847	0.65	-0.1
114,927	-		MPMX19_06847	0.65	-1.1
114,953	+		MPMX19_06847	0.67	-0.5
114,953	+		MPMX19_06847	0.67	-0.2
114,953	+		MPMX19_06847	0.67	+0.2
114,953	+		MPMX19_06847	0.67	+0.7
114,953	+		MPMX19_06847	0.67	+0.2
114,953	+		MPMX19_06847	0.67	-0.1
114,954	-		MPMX19_06847	0.67	+0.3
114,954	-		MPMX19_06847	0.67	+1.2
114,954	-		MPMX19_06847	0.67	-0.0
115,106	+		MPMX19_06847	0.79	+0.7
115,106	+		MPMX19_06847	0.79	-0.5
115,106	+		MPMX19_06847	0.79	+0.2
115,107	-		MPMX19_06847	0.79	-1.3
115,107	-		MPMX19_06847	0.79	-1.0
115,107	-		MPMX19_06847	0.79	+0.5
115,107	-		MPMX19_06847	0.79	+0.3
115,107	-		MPMX19_06847	0.79	+0.1
115,107	-		MPMX19_06847	0.79	-0.8
115,107	-		MPMX19_06847	0.79	-2.4
115,178	+		MPMX19_06847	0.84	-1.3
115,178	+		MPMX19_06847	0.84	+0.4
115,179	-		MPMX19_06847	0.85	+1.5
115,190	+		MPMX19_06847	0.85	-0.5
115,282	+				-1.6
115,282	+				+0.9
115,282	+				+0.5
115,282	+				-0.4
115,282	+				-1.3
115,282	+				-2.2
115,282	+				-2.1
115,282	+				+0.5
115,282	+				+0.4
115,282	+				-0.6
115,282	+				-0.2
115,283	-				-1.6
115,283	-				+0.3
115,283	-				-0.6
115,283	-				+0.3
115,283	-				-2.2
115,283	-				+0.2
115,283	-				-0.7
115,283	-				-0.1
115,283	-				-0.6
115,283	-				-1.5
115,283	-				-1.0
115,346	+				+0.7
115,346	+				-0.4
115,347	-				+0.3
115,347	-				-0.5
115,349	+				-0.3
115,349	+				+0.3
115,349	+				-0.5
115,349	+				+0.4
115,349	+				-0.5
115,349	+				-1.1
115,349	+				+0.1
115,349	+				-1.1
115,350	-				+0.0
115,350	-				-0.4
115,350	-				-1.3
115,350	-				+2.0
115,350	-				-0.8
115,350	-				-0.4
115,350	-				+0.4
115,350	-				+1.7
115,350	-				+0.4
115,401	-				-0.1
115,473	-				-0.3
115,497	-				+0.5
115,497	-				+1.5
115,497	-				+0.9
115,650	-		MPMX19_06848	0.20	+0.6
115,707	-		MPMX19_06848	0.24	+0.4
115,907	+		MPMX19_06848	0.40	+0.7
115,907	+		MPMX19_06848	0.40	+0.5
115,908	-		MPMX19_06848	0.40	+1.0
115,908	-		MPMX19_06848	0.40	-0.1
116,075	+		MPMX19_06848	0.53	+0.5
116,075	+		MPMX19_06848	0.53	+0.5
116,075	+		MPMX19_06848	0.53	-0.4
116,075	+		MPMX19_06848	0.53	+0.7
116,076	-		MPMX19_06848	0.53	+0.1
116,076	-		MPMX19_06848	0.53	-0.2
116,076	-		MPMX19_06848	0.53	+0.1
116,145	+		MPMX19_06848	0.58	+1.2
116,145	+		MPMX19_06848	0.58	+0.4
116,146	-		MPMX19_06848	0.58	-0.3
116,146	-		MPMX19_06848	0.58	+0.3
116,146	-		MPMX19_06848	0.58	-0.6
116,171	+		MPMX19_06848	0.60	+0.4
116,446	+		MPMX19_06848	0.82	+0.2
116,446	+		MPMX19_06848	0.82	-1.5
116,446	+		MPMX19_06848	0.82	-1.1
116,446	+		MPMX19_06848	0.82	+2.0
116,446	+		MPMX19_06848	0.82	-0.2
116,447	-		MPMX19_06848	0.82	-0.5
116,447	-		MPMX19_06848	0.82	+0.7
116,447	-		MPMX19_06848	0.82	+0.2
116,479	+		MPMX19_06848	0.84	-0.4
116,544	+		MPMX19_06848	0.89	-0.3
116,545	-		MPMX19_06848	0.89	+0.1
116,549	+		MPMX19_06848	0.90	+0.5
116,549	+		MPMX19_06848	0.90	+0.1
116,549	+		MPMX19_06848	0.90	-0.6
116,550	-		MPMX19_06848	0.90	-0.7
116,579	+				-0.5
116,893	+				-0.8
116,893	+				+0.1
116,894	-				-0.1
116,894	-				-0.9
116,894	-				-0.5
116,894	-				-0.7
116,894	-				-0.0
116,894	-				+0.2
116,894	-				-0.1
117,052	+		MPMX19_06849	0.14	-0.3
117,052	+		MPMX19_06849	0.14	+0.3
117,052	+		MPMX19_06849	0.14	-0.9
117,052	+		MPMX19_06849	0.14	+0.3
117,053	-		MPMX19_06849	0.14	-1.6
117,058	+		MPMX19_06849	0.14	-1.6
117,208	+		MPMX19_06849	0.24	-2.2
117,208	+		MPMX19_06849	0.24	-0.1
117,208	+		MPMX19_06849	0.24	+0.6
117,208	+		MPMX19_06849	0.24	-0.3
117,208	+		MPMX19_06849	0.24	+0.2
117,208	+		MPMX19_06849	0.24	+2.3
117,208	+		MPMX19_06849	0.24	+0.5
117,208	+		MPMX19_06849	0.24	-1.6
117,209	-		MPMX19_06849	0.24	-0.6
117,209	-		MPMX19_06849	0.24	-0.3
117,400	+		MPMX19_06849	0.38	-0.2
117,400	+		MPMX19_06849	0.38	-0.3
117,401	-		MPMX19_06849	0.38	+0.4