Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06532 and MPMX19_06533 are separated by 90 nucleotides MPMX19_06533 and MPMX19_06534 are separated by 373 nucleotides
MPMX19_06532: MPMX19_06532 - Validamycin A dioxygenase, at 319,891 to 320,952
_06532
MPMX19_06533: MPMX19_06533 - hypothetical protein, at 321,043 to 321,234
_06533
MPMX19_06534: MPMX19_06534 - Putative amino-acid ABC transporter-binding protein YhdW, at 321,608 to 322,678
_06534
Position (kb) 321
322 Strain fitness (log2 ratio) -2
-1
0
1 at 320.159 kb on + strand, within MPMX19_06532 at 320.160 kb on - strand, within MPMX19_06532 at 320.307 kb on + strand, within MPMX19_06532 at 320.307 kb on + strand, within MPMX19_06532 at 320.308 kb on - strand, within MPMX19_06532 at 320.687 kb on + strand, within MPMX19_06532 at 320.688 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 320.817 kb on - strand, within MPMX19_06532 at 321.237 kb on + strand at 321.237 kb on + strand at 321.248 kb on + strand at 321.248 kb on + strand at 321.248 kb on + strand at 321.248 kb on + strand at 321.248 kb on + strand at 321.248 kb on + strand at 321.249 kb on - strand at 321.249 kb on - strand at 321.249 kb on - strand at 321.249 kb on - strand at 321.249 kb on - strand at 321.249 kb on - strand at 321.249 kb on - strand at 321.249 kb on - strand at 321.249 kb on - strand at 321.268 kb on - strand at 322.050 kb on + strand, within MPMX19_06534
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 320,159 + MPMX19_06532 0.25 +0.1 320,160 - MPMX19_06532 0.25 -0.1 320,307 + MPMX19_06532 0.39 +0.8 320,307 + MPMX19_06532 0.39 +0.2 320,308 - MPMX19_06532 0.39 +0.6 320,687 + MPMX19_06532 0.75 -0.5 320,688 - MPMX19_06532 0.75 -0.1 320,817 - MPMX19_06532 0.87 -0.9 320,817 - MPMX19_06532 0.87 -0.9 320,817 - MPMX19_06532 0.87 -0.8 320,817 - MPMX19_06532 0.87 +0.3 320,817 - MPMX19_06532 0.87 -0.9 320,817 - MPMX19_06532 0.87 +0.5 320,817 - MPMX19_06532 0.87 -0.4 320,817 - MPMX19_06532 0.87 +0.5 320,817 - MPMX19_06532 0.87 +0.3 320,817 - MPMX19_06532 0.87 +0.4 320,817 - MPMX19_06532 0.87 +0.7 320,817 - MPMX19_06532 0.87 +0.6 320,817 - MPMX19_06532 0.87 +0.7 320,817 - MPMX19_06532 0.87 +1.0 321,237 + +0.3 321,237 + -1.6 321,248 + -1.9 321,248 + -0.8 321,248 + -1.5 321,248 + -0.8 321,248 + -0.6 321,248 + +1.2 321,249 - +0.4 321,249 - -0.9 321,249 - -0.4 321,249 - -0.3 321,249 - -1.4 321,249 - -0.6 321,249 - -0.1 321,249 - -0.4 321,249 - -0.1 321,268 - +0.2 322,050 + MPMX19_06534 0.41 +0.1
Or see this region's nucleotide sequence