Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06371

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
137,472	+				+0.7
137,472	+				-0.1
137,472	+				-0.4
137,473	-				-1.0
137,507	+				-0.0
137,507	+				-1.6
137,508	-				-1.2
137,508	-				+0.2
137,508	-				+0.1
137,866	+		MPMX19_06370	0.43	-1.6
137,921	+		MPMX19_06370	0.50	-0.1
137,931	+		MPMX19_06370	0.51	+0.7
138,004	+		MPMX19_06370	0.60	+0.9
138,004	+		MPMX19_06370	0.60	-0.1
138,004	+		MPMX19_06370	0.60	-0.3
138,004	+		MPMX19_06370	0.60	-0.9
138,005	-		MPMX19_06370	0.60	+0.3
138,005	-		MPMX19_06370	0.60	-1.8
138,008	+		MPMX19_06370	0.60	-0.8
138,008	+		MPMX19_06370	0.60	+0.1
138,008	+		MPMX19_06370	0.60	+0.5
138,008	+		MPMX19_06370	0.60	+0.2
138,008	+		MPMX19_06370	0.60	+0.4
138,008	+		MPMX19_06370	0.60	-1.6
138,008	+		MPMX19_06370	0.60	-0.3
138,008	+		MPMX19_06370	0.60	+0.1
138,008	+		MPMX19_06370	0.60	+0.1
138,008	+		MPMX19_06370	0.60	-0.6
138,008	+		MPMX19_06370	0.60	+0.2
138,008	+		MPMX19_06370	0.60	-0.2
138,008	+		MPMX19_06370	0.60	+0.0
138,009	-		MPMX19_06370	0.61	-1.9
138,009	-		MPMX19_06370	0.61	-0.6
138,009	-		MPMX19_06370	0.61	-0.5
138,009	-		MPMX19_06370	0.61	-1.6
138,183	+		MPMX19_06370	0.81	+0.9
138,183	+		MPMX19_06370	0.81	-0.2
138,183	+		MPMX19_06370	0.81	-0.1
138,183	+		MPMX19_06370	0.81	-0.7
138,184	-		MPMX19_06370	0.82	+0.0
138,231	-		MPMX19_06370	0.87	+0.5
138,275	+				+0.0
138,276	-				-0.9
138,276	-				+0.5
138,291	+				-0.1
138,291	+				+0.3
138,291	+				-0.8
138,291	+				+0.5
138,292	-				-0.6
138,292	-				-0.2
138,292	-				-0.6
138,292	-				+0.2
138,421	+				-1.1
138,421	+				-1.3
138,421	+				+0.7
138,421	+				-0.1
138,421	+				-1.9
138,421	+				-0.1
138,421	+				+0.5
138,421	+				-0.4
138,421	+				-1.0
138,421	+				-1.1
138,421	+				-0.3
138,421	+				-0.2
138,421	+				+0.3
138,422	-				+1.1
138,422	-				-1.5
138,422	-				+0.4
138,422	-				-0.1
138,422	-				-0.5
138,422	-				+0.8
138,422	-				+0.5
138,422	-				-0.1
138,422	-				-1.9
138,422	-				-0.5
138,432	+				+0.7
138,432	+				-1.1
138,432	+				-0.8
138,432	+				+0.7
138,432	+				-2.3
138,432	+				-1.2
138,432	+				-0.8
138,432	+				-0.4
138,433	-				-1.8
138,433	-				-0.3
138,433	-				+0.6
138,433	-				-0.6
138,543	-		MPMX19_06371	0.18	+0.1
138,543	-		MPMX19_06371	0.18	-0.6
138,543	-		MPMX19_06371	0.18	+0.1
138,543	-		MPMX19_06371	0.18	+0.8
138,543	-		MPMX19_06371	0.18	+0.1
138,543	-		MPMX19_06371	0.18	+0.4
138,543	-		MPMX19_06371	0.18	+0.3
138,543	-		MPMX19_06371	0.18	+0.3
138,543	-		MPMX19_06371	0.18	-0.6
138,543	-		MPMX19_06371	0.18	-1.1
138,543	-		MPMX19_06371	0.18	-0.6
138,543	-		MPMX19_06371	0.18	+0.5
139,164	+		MPMX19_06371	0.62	-0.5
139,164	+		MPMX19_06371	0.62	-1.5
139,164	+		MPMX19_06371	0.62	+0.9
139,164	+		MPMX19_06371	0.62	-1.0
139,164	+		MPMX19_06371	0.62	-1.0
139,164	+		MPMX19_06371	0.62	+0.1
139,165	-		MPMX19_06371	0.62	-1.0
139,165	-		MPMX19_06371	0.62	+0.7
139,165	-		MPMX19_06371	0.62	-1.1
139,165	-		MPMX19_06371	0.62	-0.1
139,165	-		MPMX19_06371	0.62	-0.6
139,371	+		MPMX19_06371	0.76	+0.1
139,371	+		MPMX19_06371	0.76	+0.1
139,372	-		MPMX19_06371	0.76	-0.4
139,372	-		MPMX19_06371	0.76	+0.7
139,428	+		MPMX19_06371	0.80	-1.8
139,466	+		MPMX19_06371	0.83	-0.8
139,466	+		MPMX19_06371	0.83	+0.1
139,466	+		MPMX19_06371	0.83	-2.5
139,466	+		MPMX19_06371	0.83	+0.4
139,466	+		MPMX19_06371	0.83	+0.2
139,466	+		MPMX19_06371	0.83	-0.9
139,466	+		MPMX19_06371	0.83	-0.6
139,467	-		MPMX19_06371	0.83	-0.9
139,467	-		MPMX19_06371	0.83	-1.5
139,467	-		MPMX19_06371	0.83	-0.3
139,467	-		MPMX19_06371	0.83	-0.1
139,467	-		MPMX19_06371	0.83	-0.8
139,503	+		MPMX19_06371	0.86	+0.3
139,503	+		MPMX19_06371	0.86	-0.9
139,504	-		MPMX19_06371	0.86	-1.9
139,639	-				-0.0
139,703	+				+0.2
139,727	-				-0.6
139,841	+				-0.8
139,841	+				-0.5
139,842	-				-0.6
139,872	+				+0.1
139,872	+				-0.3
139,872	+				-0.0
139,872	+				+0.4
139,872	+				+0.7
139,873	-				+1.5
139,873	-				-0.3
139,873	-				+0.7
139,873	-				+0.3
139,873	-				+0.1
139,932	+				-0.1
140,034	+				+0.3
140,035	-				-0.6
140,035	-				-0.4
140,035	-				-0.7
140,047	+				-1.4
140,047	+				-1.5
140,047	+				-0.7
140,047	+				+0.4
140,047	+				+0.5
140,047	+				+1.1
140,047	+				+0.1
140,047	+				-0.7
140,047	+				-0.5
140,047	+				+0.6
140,048	-				+1.2
140,048	-				-1.7
140,048	-				-1.5
140,048	-				+1.1
140,048	-				-0.3
140,054	+				-0.6
140,152	+		MPMX19_06372	0.18	-0.0
140,152	+		MPMX19_06372	0.18	+0.0
140,152	+		MPMX19_06372	0.18	+3.0
140,152	+		MPMX19_06372	0.18	-0.3
140,395	+		MPMX19_06372	0.40	-1.5
140,395	+		MPMX19_06372	0.40	+0.1
140,395	+		MPMX19_06372	0.40	-1.0
140,395	+		MPMX19_06372	0.40	-1.3
140,395	+		MPMX19_06372	0.40	-0.4
140,395	+		MPMX19_06372	0.40	-0.5
140,396	-		MPMX19_06372	0.40	-1.6
140,396	-		MPMX19_06372	0.40	+0.4
140,396	-		MPMX19_06372	0.40	+0.7
140,396	-		MPMX19_06372	0.40	-0.1
140,425	+		MPMX19_06372	0.42	+0.4
140,425	+		MPMX19_06372	0.42	+0.2
140,425	+		MPMX19_06372	0.42	-1.5
140,425	+		MPMX19_06372	0.42	-0.0
140,425	+		MPMX19_06372	0.42	+0.3
140,426	-		MPMX19_06372	0.42	-0.6
140,426	-		MPMX19_06372	0.42	-0.2
140,426	-		MPMX19_06372	0.42	+1.0
140,426	-		MPMX19_06372	0.42	+0.3
140,426	-		MPMX19_06372	0.42	+1.1
140,437	-		MPMX19_06372	0.43	-0.7
140,452	+		MPMX19_06372	0.45	-1.4
140,452	+		MPMX19_06372	0.45	+0.7
140,452	+		MPMX19_06372	0.45	+0.7
140,452	+		MPMX19_06372	0.45	-0.3
140,452	+		MPMX19_06372	0.45	-0.4
140,452	+		MPMX19_06372	0.45	-0.9
140,453	-		MPMX19_06372	0.45	-0.3
140,454	+		MPMX19_06372	0.45	-0.2
140,454	+		MPMX19_06372	0.45	-0.8
140,454	+		MPMX19_06372	0.45	-0.2
140,454	+		MPMX19_06372	0.45	-0.9
140,454	+		MPMX19_06372	0.45	-1.8
140,454	+		MPMX19_06372	0.45	+0.2
140,455	-		MPMX19_06372	0.45	-1.2
140,455	-		MPMX19_06372	0.45	+0.3
140,455	-		MPMX19_06372	0.45	-0.1
140,455	-		MPMX19_06372	0.45	+0.5
140,455	-		MPMX19_06372	0.45	-1.0
140,494	+		MPMX19_06372	0.48	-0.5
140,494	+		MPMX19_06372	0.48	-1.6
140,494	+		MPMX19_06372	0.48	-1.3
140,495	-		MPMX19_06372	0.48	+1.3
140,495	-		MPMX19_06372	0.48	+0.1
140,495	-		MPMX19_06372	0.48	-0.5
140,495	-		MPMX19_06372	0.48	-1.1
140,495	-		MPMX19_06372	0.48	+1.0
140,495	-		MPMX19_06372	0.48	-0.6
140,500	+		MPMX19_06372	0.49	-0.7
140,501	-		MPMX19_06372	0.49	-0.6
140,503	+		MPMX19_06372	0.49	-1.0
140,503	+		MPMX19_06372	0.49	-0.2
140,503	+		MPMX19_06372	0.49	-1.1
140,503	+		MPMX19_06372	0.49	+0.7
140,503	+		MPMX19_06372	0.49	+1.5
140,504	-		MPMX19_06372	0.49	-2.0
140,547	-		MPMX19_06372	0.53	+0.7