Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06356

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
121,643	-				-0.1
121,741	+				+2.1
121,742	-				+0.6
121,820	+				-0.6
121,820	+				-0.5
121,820	+				-0.5
121,820	+				-0.2
121,821	-				-0.4
121,821	-				-1.8
121,821	-				+0.2
121,821	-				+0.9
121,821	-				-0.5
121,841	+				+0.3
121,841	+				-1.3
121,841	+				+0.4
121,842	-				+0.4
121,923	+				-0.3
121,923	+				-1.6
121,923	+				-0.1
122,195	+				-0.1
122,195	+				-0.6
122,196	-				+0.4
122,196	-				-1.1
122,196	-				+0.0
122,196	-				-0.3
122,354	+		MPMX19_06355	0.20	+0.9
122,354	+		MPMX19_06355	0.20	+0.1
122,354	+		MPMX19_06355	0.20	+0.3
122,354	+		MPMX19_06355	0.20	-0.1
122,354	+		MPMX19_06355	0.20	+0.7
122,354	+		MPMX19_06355	0.20	-0.2
122,354	+		MPMX19_06355	0.20	-0.9
122,354	+		MPMX19_06355	0.20	+0.3
122,354	+		MPMX19_06355	0.20	-1.5
122,354	+		MPMX19_06355	0.20	+0.2
122,355	-		MPMX19_06355	0.21	+0.2
122,355	-		MPMX19_06355	0.21	-0.1
122,355	-		MPMX19_06355	0.21	+0.4
122,355	-		MPMX19_06355	0.21	+0.0
122,355	-		MPMX19_06355	0.21	+0.7
122,519	+		MPMX19_06355	0.69	+0.8
122,520	-		MPMX19_06355	0.69	+0.5
122,581	-		MPMX19_06355	0.87	-0.5
122,711	+				-0.3
122,711	+				+0.5
122,711	+				+1.0
122,711	+				-0.1
122,711	+				-0.4
122,711	+				+0.6
122,711	+				+0.2
122,711	+				+0.6
122,711	+				-0.4
122,711	+				-1.6
122,711	+				-2.8
122,711	+				-0.1
122,712	-				-1.5
122,712	-				-0.2
122,712	-				+0.9
122,712	-				-0.4
122,712	-				-0.8
122,712	-				-2.0
122,712	-				-1.1
122,712	-				+1.5
122,712	-				+2.3
122,712	-				-1.3
122,712	-				-1.5
122,712	-				+0.3
122,807	+		MPMX19_06356	0.16	-0.9
122,808	-		MPMX19_06356	0.16	+0.1
122,808	-		MPMX19_06356	0.16	-0.8
122,808	-		MPMX19_06356	0.16	-0.5
122,879	+		MPMX19_06356	0.22	+0.3
122,879	+		MPMX19_06356	0.22	-1.0
122,879	+		MPMX19_06356	0.22	-0.5
122,880	-		MPMX19_06356	0.22	-0.5
122,880	-		MPMX19_06356	0.22	-1.4
122,880	-		MPMX19_06356	0.22	-0.6
122,880	-		MPMX19_06356	0.22	-0.3
123,104	+		MPMX19_06356	0.40	+1.3
123,104	+		MPMX19_06356	0.40	-0.1
123,104	+		MPMX19_06356	0.40	-0.8
123,105	-		MPMX19_06356	0.40	-1.1
123,105	-		MPMX19_06356	0.40	-2.4
123,137	+		MPMX19_06356	0.43	+0.7
123,137	+		MPMX19_06356	0.43	+0.1
123,137	+		MPMX19_06356	0.43	-0.8
123,137	+		MPMX19_06356	0.43	-1.3
123,137	+		MPMX19_06356	0.43	+0.4
123,138	-		MPMX19_06356	0.43	-0.8
123,138	-		MPMX19_06356	0.43	-0.1
123,138	-		MPMX19_06356	0.43	-0.1
123,138	-		MPMX19_06356	0.43	-0.5
123,138	-		MPMX19_06356	0.43	-1.4
123,140	+		MPMX19_06356	0.43	+1.5
123,140	+		MPMX19_06356	0.43	+0.2
123,140	+		MPMX19_06356	0.43	-0.1
123,141	-		MPMX19_06356	0.43	+0.7
123,141	-		MPMX19_06356	0.43	-0.0
123,318	+		MPMX19_06356	0.57	-1.1
123,431	+		MPMX19_06356	0.66	-2.4
123,464	+		MPMX19_06356	0.69	-0.1
123,464	+		MPMX19_06356	0.69	-2.1
123,464	+		MPMX19_06356	0.69	-0.1
123,464	+		MPMX19_06356	0.69	-0.5
123,464	+		MPMX19_06356	0.69	-1.6
123,464	+		MPMX19_06356	0.69	-0.6
123,464	+		MPMX19_06356	0.69	+0.4
123,464	+		MPMX19_06356	0.69	+0.1
123,464	+		MPMX19_06356	0.69	+0.9
123,464	+		MPMX19_06356	0.69	+0.3
123,464	+		MPMX19_06356	0.69	-0.8
123,464	+		MPMX19_06356	0.69	+0.0
123,464	+		MPMX19_06356	0.69	-0.8
123,465	-		MPMX19_06356	0.69	-1.0
123,465	-		MPMX19_06356	0.69	-0.3
123,465	-		MPMX19_06356	0.69	-1.1
123,465	-		MPMX19_06356	0.69	-0.4
123,465	-		MPMX19_06356	0.69	-1.0
123,465	-		MPMX19_06356	0.69	+0.1
123,465	-		MPMX19_06356	0.69	-0.7
123,465	-		MPMX19_06356	0.69	-1.1
123,671	+		MPMX19_06356	0.86	-1.4
123,671	+		MPMX19_06356	0.86	-0.1
123,671	+		MPMX19_06356	0.86	+0.3
123,671	+		MPMX19_06356	0.86	+0.3
123,671	+		MPMX19_06356	0.86	+0.7
123,672	-		MPMX19_06356	0.86	-0.1
123,672	-		MPMX19_06356	0.86	+0.9
123,672	-		MPMX19_06356	0.86	-1.1
123,672	-		MPMX19_06356	0.86	-0.4
123,672	-		MPMX19_06356	0.86	+1.0
123,672	-		MPMX19_06356	0.86	-0.5
123,672	-		MPMX19_06356	0.86	+0.1
123,734	+				-0.3
123,734	+				+0.0
123,735	-				-1.9
123,735	-				-1.5
123,735	-				-0.4
123,735	-				+0.1
123,735	-				+0.8
123,735	-				-0.5
123,735	-				-0.6
123,735	-				+0.4
123,735	-				-1.4
124,131	-		MPMX19_06357	0.20	-1.1
124,183	+		MPMX19_06357	0.24	-0.7
124,183	+		MPMX19_06357	0.24	-1.3
124,183	+		MPMX19_06357	0.24	+0.5
124,183	+		MPMX19_06357	0.24	-1.6
124,183	+		MPMX19_06357	0.24	-0.3
124,183	+		MPMX19_06357	0.24	+0.7
124,183	+		MPMX19_06357	0.24	-1.4
124,183	+		MPMX19_06357	0.24	-0.2
124,183	+		MPMX19_06357	0.24	-0.6
124,184	-		MPMX19_06357	0.24	+0.1
124,184	-		MPMX19_06357	0.24	+0.1
124,184	-		MPMX19_06357	0.24	-0.1
124,184	-		MPMX19_06357	0.24	+0.4
124,184	-		MPMX19_06357	0.24	+0.2
124,184	-		MPMX19_06357	0.24	+1.4
124,184	-		MPMX19_06357	0.24	-0.3
124,184	-		MPMX19_06357	0.24	+0.0
124,184	-		MPMX19_06357	0.24	+0.7
124,184	-		MPMX19_06357	0.24	-0.9
124,184	-		MPMX19_06357	0.24	-0.8
124,487	+		MPMX19_06357	0.45	-0.2
124,488	-		MPMX19_06357	0.45	-0.5
124,488	-		MPMX19_06357	0.45	-0.6
124,520	+		MPMX19_06357	0.47	-0.5
124,705	+		MPMX19_06357	0.60	-0.1
124,705	+		MPMX19_06357	0.60	-0.3
124,705	+		MPMX19_06357	0.60	-1.1
124,706	-		MPMX19_06357	0.60	+0.5
124,706	-		MPMX19_06357	0.60	-1.3
124,706	-		MPMX19_06357	0.60	+0.5