Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06341

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
107,520	+		MPMX19_06338	0.68	-0.8
107,520	+		MPMX19_06338	0.68	+0.9
107,520	+		MPMX19_06338	0.68	-2.6
107,520	+		MPMX19_06338	0.68	+0.2
107,521	-		MPMX19_06338	0.68	+0.6
107,521	-		MPMX19_06338	0.68	-1.1
107,521	-		MPMX19_06338	0.68	-0.1
107,521	-		MPMX19_06338	0.68	+0.4
107,521	-		MPMX19_06338	0.68	+0.3
107,521	-		MPMX19_06338	0.68	-1.5
107,521	-		MPMX19_06338	0.68	-1.3
107,547	+		MPMX19_06338	0.70	-0.4
107,547	+		MPMX19_06338	0.70	+0.0
107,547	+		MPMX19_06338	0.70	-0.1
107,547	+		MPMX19_06338	0.70	-1.1
107,547	+		MPMX19_06338	0.70	-1.1
107,547	+		MPMX19_06338	0.70	+0.1
107,698	+		MPMX19_06338	0.86	+0.6
107,699	-		MPMX19_06338	0.86	-0.1
107,699	-		MPMX19_06338	0.86	-1.2
107,699	-		MPMX19_06338	0.86	+0.1
107,805	+				-1.1
107,805	+				+0.2
107,805	+				-0.1
108,087	+				+0.1
108,087	+				-0.1
108,088	-				-2.4
108,088	-				-0.1
108,130	+				-0.5
108,130	+				-0.2
108,172	+				-1.5
108,172	+				-0.1
108,173	-				+0.3
108,173	-				-1.0
108,173	-				-0.3
108,173	-				-0.3
108,175	+				+0.7
108,175	+				-0.6
108,319	+		MPMX19_06340	0.37	+1.0
108,319	+		MPMX19_06340	0.37	-0.4
108,320	-		MPMX19_06340	0.37	-0.1
108,344	+		MPMX19_06340	0.53	+0.7
108,344	+		MPMX19_06340	0.53	-0.9
108,345	-		MPMX19_06340	0.54	-0.1
108,345	-		MPMX19_06340	0.54	+0.4
108,345	-		MPMX19_06340	0.54	-2.0
108,348	+		MPMX19_06340	0.56	-0.0
108,349	-		MPMX19_06340	0.57	+0.4
108,485	+				-0.2
108,485	+				+1.2
108,485	+				+0.3
108,486	-				+0.8
108,486	-				-0.9
108,606	+		MPMX19_06341	0.34	+1.7
108,606	+		MPMX19_06341	0.34	-0.1
108,606	+		MPMX19_06341	0.34	-0.6
108,606	+		MPMX19_06341	0.34	+0.7
108,606	+		MPMX19_06341	0.34	-1.8
108,606	+		MPMX19_06341	0.34	+0.4
108,606	+		MPMX19_06341	0.34	+1.2
108,606	+		MPMX19_06341	0.34	+0.6
108,607	-		MPMX19_06341	0.34	-0.5
108,607	-		MPMX19_06341	0.34	+1.7
108,607	-		MPMX19_06341	0.34	-2.2
108,607	-		MPMX19_06341	0.34	-0.3
108,607	-		MPMX19_06341	0.34	-1.1
108,607	-		MPMX19_06341	0.34	-0.1
108,607	-		MPMX19_06341	0.34	-0.4
108,607	-		MPMX19_06341	0.34	+0.5
108,825	-				+1.0
108,832	-				-0.1
108,855	+				+0.2
108,855	+				-0.2
108,859	+				+0.7
108,879	-				-1.5
108,879	-				-0.3
108,934	-				+0.3
108,987	+				-0.3
108,988	-				+1.7
108,988	-				+1.5
109,011	+		MPMX19_06342	0.11	+0.6
109,011	+		MPMX19_06342	0.11	-0.9
109,011	+		MPMX19_06342	0.11	-1.2
109,011	+		MPMX19_06342	0.11	-2.3
109,012	-		MPMX19_06342	0.11	+1.2
109,136	+		MPMX19_06342	0.57	-1.3
109,136	+		MPMX19_06342	0.57	-0.6
109,136	+		MPMX19_06342	0.57	+0.4
109,136	+		MPMX19_06342	0.57	+0.3
109,136	+		MPMX19_06342	0.57	-0.9
109,136	+		MPMX19_06342	0.57	-0.0
109,136	+		MPMX19_06342	0.57	+0.1
109,136	+		MPMX19_06342	0.57	-0.1
109,136	+		MPMX19_06342	0.57	+0.4
109,136	+		MPMX19_06342	0.57	+0.7
109,136	+		MPMX19_06342	0.57	-1.3
109,136	+		MPMX19_06342	0.57	+1.2
109,137	-		MPMX19_06342	0.57	+2.1
109,137	-		MPMX19_06342	0.57	+0.9
109,137	-		MPMX19_06342	0.57	-0.2
109,137	-		MPMX19_06342	0.57	-1.1
109,137	-		MPMX19_06342	0.57	-0.1
109,137	-		MPMX19_06342	0.57	-0.2
109,137	-		MPMX19_06342	0.57	+0.8
109,137	-		MPMX19_06342	0.57	+0.1
109,137	-		MPMX19_06342	0.57	+0.1
109,137	-		MPMX19_06342	0.57	-0.4
109,137	-		MPMX19_06342	0.57	-0.1
109,137	-		MPMX19_06342	0.57	-0.7
109,186	+		MPMX19_06342	0.76	+0.1
109,186	+		MPMX19_06342	0.76	+1.4
109,186	+		MPMX19_06342	0.76	-0.1
109,186	+		MPMX19_06342	0.76	-1.1
109,186	+		MPMX19_06342	0.76	+0.7
109,186	+		MPMX19_06342	0.76	-0.6
109,186	+		MPMX19_06342	0.76	+1.4
109,186	+		MPMX19_06342	0.76	-0.6
109,186	+		MPMX19_06342	0.76	+2.3
109,186	+		MPMX19_06342	0.76	-0.6
109,186	+		MPMX19_06342	0.76	-1.8
109,186	+		MPMX19_06342	0.76	-0.3
109,186	+		MPMX19_06342	0.76	-0.2
109,186	+		MPMX19_06342	0.76	-0.2
109,186	+		MPMX19_06342	0.76	+1.2
109,186	+		MPMX19_06342	0.76	-1.3
109,186	+		MPMX19_06342	0.76	-0.1
109,186	+		MPMX19_06342	0.76	-2.4
109,186	+		MPMX19_06342	0.76	-0.9
109,187	-		MPMX19_06342	0.76	-1.1
109,187	-		MPMX19_06342	0.76	-0.7
109,187	-		MPMX19_06342	0.76	-0.8
109,187	-		MPMX19_06342	0.76	-1.7
109,187	-		MPMX19_06342	0.76	+0.7
109,187	-		MPMX19_06342	0.76	-0.8
109,187	-		MPMX19_06342	0.76	+1.3
109,187	-		MPMX19_06342	0.76	-0.3
109,187	-		MPMX19_06342	0.76	+0.5
109,188	+		MPMX19_06342	0.76	+0.2
109,188	+		MPMX19_06342	0.76	-0.5
109,188	+		MPMX19_06342	0.76	+1.9
109,188	+		MPMX19_06342	0.76	+0.7
109,189	-		MPMX19_06342	0.77	+0.4
109,189	-		MPMX19_06342	0.77	+1.3
109,189	-		MPMX19_06342	0.77	+1.1
109,189	-		MPMX19_06342	0.77	+0.9
109,189	-		MPMX19_06342	0.77	+0.3
109,249	+				+0.1
109,250	-				+1.5
109,342	+				-0.8
109,342	+				-1.4
109,342	+				+0.3
109,342	+				+0.7
109,342	+				-0.6
109,342	+				-1.1
109,342	+				-0.5
109,343	-				-0.6
109,343	-				-0.6
109,343	-				+1.7
109,343	-				-0.6
109,343	-				+0.1
109,343	-				-1.1
109,718	+		MPMX19_06343	0.31	+0.4
109,718	+		MPMX19_06343	0.31	-0.3
109,718	+		MPMX19_06343	0.31	-0.6
109,718	+		MPMX19_06343	0.31	-0.6
109,719	-		MPMX19_06343	0.31	+0.3
109,719	-		MPMX19_06343	0.31	+0.7
109,719	-		MPMX19_06343	0.31	-0.2
109,719	-		MPMX19_06343	0.31	+0.1
109,719	-		MPMX19_06343	0.31	-0.3
109,719	-		MPMX19_06343	0.31	-0.8
109,784	+		MPMX19_06343	0.37	-0.2
109,784	+		MPMX19_06343	0.37	-0.7
109,784	+		MPMX19_06343	0.37	-0.7
109,785	-		MPMX19_06343	0.37	-1.1
109,785	-		MPMX19_06343	0.37	+0.1
109,785	-		MPMX19_06343	0.37	-1.0
109,785	-		MPMX19_06343	0.37	+0.8
109,785	-		MPMX19_06343	0.37	+1.1
109,785	-		MPMX19_06343	0.37	+0.8
109,785	-		MPMX19_06343	0.37	-0.3
109,785	-		MPMX19_06343	0.37	-1.4