Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06337

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
105,820	+		MPMX19_06336	0.55	+1.0
105,820	+		MPMX19_06336	0.55	-0.5
105,820	+		MPMX19_06336	0.55	-0.8
105,820	+		MPMX19_06336	0.55	+0.5
105,820	+		MPMX19_06336	0.55	+1.2
105,820	+		MPMX19_06336	0.55	-0.4
105,820	+		MPMX19_06336	0.55	+0.8
105,820	+		MPMX19_06336	0.55	-2.0
105,820	+		MPMX19_06336	0.55	-1.0
105,821	-		MPMX19_06336	0.55	-0.2
105,821	-		MPMX19_06336	0.55	+0.8
105,821	-		MPMX19_06336	0.55	+0.7
105,821	-		MPMX19_06336	0.55	-1.1
105,821	-		MPMX19_06336	0.55	-0.6
105,821	-		MPMX19_06336	0.55	-1.0
105,821	-		MPMX19_06336	0.55	+0.2
105,821	-		MPMX19_06336	0.55	-0.2
105,834	+		MPMX19_06336	0.56	-0.2
105,834	+		MPMX19_06336	0.56	+1.1
105,834	+		MPMX19_06336	0.56	+1.3
105,835	-		MPMX19_06336	0.56	-0.3
105,835	-		MPMX19_06336	0.56	-0.9
105,835	-		MPMX19_06336	0.56	-0.8
105,835	-		MPMX19_06336	0.56	-0.0
105,835	-		MPMX19_06336	0.56	-0.8
105,835	-		MPMX19_06336	0.56	-1.8
105,835	-		MPMX19_06336	0.56	-0.6
105,869	-		MPMX19_06336	0.60	-1.6
105,869	-		MPMX19_06336	0.60	-0.3
106,019	-		MPMX19_06336	0.73	-1.4
106,030	+		MPMX19_06336	0.74	+0.2
106,030	+		MPMX19_06336	0.74	+0.1
106,030	+		MPMX19_06336	0.74	+0.7
106,042	+		MPMX19_06336	0.75	-0.6
106,042	+		MPMX19_06336	0.75	-0.6
106,043	-		MPMX19_06336	0.75	-0.8
106,043	-		MPMX19_06336	0.75	-0.5
106,043	-		MPMX19_06336	0.75	-1.4
106,287	+				+0.4
106,356	+				+0.1
106,356	+				-0.3
106,374	+				-0.3
106,374	+				+0.1
106,374	+				-0.6
106,374	+				-0.6
106,374	+				+0.1
106,374	+				-0.2
106,374	+				-2.1
106,375	-				-1.2
106,375	-				-0.7
106,375	-				-1.0
106,375	-				-1.1
106,375	-				+1.4
106,375	-				+0.3
106,375	-				-1.9
106,375	-				-1.0
106,375	-				-0.0
106,377	+				-1.3
106,377	+				+0.1
106,377	+				-0.3
106,377	+				+0.1
106,377	+				-0.6
106,377	+				-0.5
106,378	-				-0.8
106,378	-				-0.6
106,412	+				+0.7
106,412	+				-1.1
106,453	+				+0.4
106,453	+				-0.9
106,453	+				-1.3
106,484	-				+0.1
106,489	+				-0.5
106,490	-				-1.9
106,495	+				-0.7
106,495	+				-0.2
106,495	+				-0.6
106,495	+				-0.2
106,495	+				+0.8
106,495	+				+0.4
106,496	-				-0.5
106,496	-				-2.1
106,496	-				-0.4
106,496	-				-0.6
106,496	-				-0.6
106,496	-				-1.6
106,496	-				-1.0
106,528	-				-0.5
106,700	+		MPMX19_06337	0.58	-1.3
106,700	+		MPMX19_06337	0.58	-0.5
106,700	+		MPMX19_06337	0.58	-0.3
106,701	-		MPMX19_06337	0.58	+0.7
106,701	-		MPMX19_06337	0.58	-0.8
106,701	-		MPMX19_06337	0.58	-2.0
106,701	-		MPMX19_06337	0.58	+1.3
106,701	-		MPMX19_06337	0.58	-1.2
106,701	-		MPMX19_06337	0.58	-1.3
106,701	-		MPMX19_06337	0.58	-0.3
106,880	+				-0.6
106,881	-				+0.0
106,905	+				-0.2
106,906	-				-1.3
107,036	-		MPMX19_06338	0.18	+0.4
107,058	+		MPMX19_06338	0.20	-0.4
107,059	-		MPMX19_06338	0.20	+1.9
107,059	-		MPMX19_06338	0.20	-0.2
107,089	-		MPMX19_06338	0.23	+0.3
107,089	-		MPMX19_06338	0.23	+1.7
107,280	+		MPMX19_06338	0.43	-1.1
107,280	+		MPMX19_06338	0.43	+0.7
107,280	+		MPMX19_06338	0.43	-0.9
107,280	+		MPMX19_06338	0.43	+1.2
107,280	+		MPMX19_06338	0.43	+1.2
107,280	+		MPMX19_06338	0.43	-1.6
107,280	+		MPMX19_06338	0.43	-1.9
107,280	+		MPMX19_06338	0.43	-0.2
107,280	+		MPMX19_06338	0.43	-1.3
107,280	+		MPMX19_06338	0.43	+0.2
107,280	+		MPMX19_06338	0.43	+0.2
107,280	+		MPMX19_06338	0.43	-0.1
107,280	+		MPMX19_06338	0.43	+0.9
107,280	+		MPMX19_06338	0.43	-1.4
107,280	+		MPMX19_06338	0.43	-1.9
107,280	+		MPMX19_06338	0.43	+0.6
107,280	+		MPMX19_06338	0.43	+0.1
107,280	+		MPMX19_06338	0.43	+0.9
107,280	+		MPMX19_06338	0.43	-0.3
107,280	+		MPMX19_06338	0.43	+2.2
107,280	+		MPMX19_06338	0.43	-0.1
107,280	+		MPMX19_06338	0.43	-0.3
107,280	+		MPMX19_06338	0.43	-0.1
107,280	+		MPMX19_06338	0.43	-0.6
107,281	-		MPMX19_06338	0.43	-0.1
107,281	-		MPMX19_06338	0.43	-0.8
107,281	-		MPMX19_06338	0.43	-1.1
107,281	-		MPMX19_06338	0.43	-0.9
107,281	-		MPMX19_06338	0.43	+0.1
107,281	-		MPMX19_06338	0.43	+0.7
107,281	-		MPMX19_06338	0.43	-0.2
107,281	-		MPMX19_06338	0.43	+0.5
107,281	-		MPMX19_06338	0.43	-0.2
107,281	-		MPMX19_06338	0.43	+0.1
107,281	-		MPMX19_06338	0.43	+0.7
107,281	-		MPMX19_06338	0.43	-0.3
107,281	-		MPMX19_06338	0.43	-0.3
107,281	-		MPMX19_06338	0.43	-0.2
107,281	-		MPMX19_06338	0.43	+0.3
107,281	-		MPMX19_06338	0.43	-0.6
107,281	-		MPMX19_06338	0.43	+0.8
107,300	+		MPMX19_06338	0.45	-2.4
107,300	+		MPMX19_06338	0.45	+1.3
107,300	+		MPMX19_06338	0.45	+0.7
107,300	+		MPMX19_06338	0.45	-0.6
107,301	-		MPMX19_06338	0.45	-1.5
107,349	+		MPMX19_06338	0.50	+0.5
107,349	+		MPMX19_06338	0.50	+0.4
107,349	+		MPMX19_06338	0.50	-0.4
107,349	+		MPMX19_06338	0.50	+1.7
107,349	+		MPMX19_06338	0.50	+0.7
107,349	+		MPMX19_06338	0.50	-1.6
107,350	-		MPMX19_06338	0.50	+0.7
107,350	-		MPMX19_06338	0.50	-0.3
107,350	-		MPMX19_06338	0.50	-0.0
107,350	-		MPMX19_06338	0.50	+1.0
107,350	-		MPMX19_06338	0.50	-2.4
107,350	-		MPMX19_06338	0.50	+0.1
107,361	+		MPMX19_06338	0.51	+0.5
107,361	+		MPMX19_06338	0.51	-0.9
107,361	+		MPMX19_06338	0.51	-0.6
107,361	+		MPMX19_06338	0.51	-0.4
107,361	+		MPMX19_06338	0.51	+0.3
107,361	+		MPMX19_06338	0.51	+0.3
107,361	+		MPMX19_06338	0.51	-0.6
107,362	-		MPMX19_06338	0.51	-1.1
107,362	-		MPMX19_06338	0.51	-0.6
107,362	-		MPMX19_06338	0.51	-0.3
107,362	-		MPMX19_06338	0.51	+0.6
107,362	-		MPMX19_06338	0.51	-1.1
107,362	-		MPMX19_06338	0.51	-0.4
107,362	-		MPMX19_06338	0.51	+0.7
107,362	-		MPMX19_06338	0.51	-0.4
107,433	+		MPMX19_06338	0.59	+0.1
107,434	-		MPMX19_06338	0.59	-0.5
107,478	+		MPMX19_06338	0.63	+0.9
107,478	+		MPMX19_06338	0.63	-1.8
107,478	+		MPMX19_06338	0.63	+0.4
107,479	-		MPMX19_06338	0.63	-0.1
107,479	-		MPMX19_06338	0.63	-0.1
107,479	-		MPMX19_06338	0.63	-0.3
107,520	+		MPMX19_06338	0.68	-0.8
107,520	+		MPMX19_06338	0.68	+0.9
107,520	+		MPMX19_06338	0.68	-2.6
107,520	+		MPMX19_06338	0.68	+0.2
107,521	-		MPMX19_06338	0.68	+0.6
107,521	-		MPMX19_06338	0.68	-1.1
107,521	-		MPMX19_06338	0.68	-0.1
107,521	-		MPMX19_06338	0.68	+0.4
107,521	-		MPMX19_06338	0.68	+0.3
107,521	-		MPMX19_06338	0.68	-1.5
107,521	-		MPMX19_06338	0.68	-1.3
107,547	+		MPMX19_06338	0.70	-0.4
107,547	+		MPMX19_06338	0.70	+0.0
107,547	+		MPMX19_06338	0.70	-0.1
107,547	+		MPMX19_06338	0.70	-1.1
107,547	+		MPMX19_06338	0.70	-1.1
107,547	+		MPMX19_06338	0.70	+0.1
107,698	+		MPMX19_06338	0.86	+0.6
107,699	-		MPMX19_06338	0.86	-0.1
107,699	-		MPMX19_06338	0.86	-1.2
107,699	-		MPMX19_06338	0.86	+0.1
107,805	+				-1.1
107,805	+				+0.2
107,805	+				-0.1